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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0041900 |
| Transcript ID | LotjaGi4g1v0041900.3 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Chaperone DnaK; TAIR: AT5G09590.1 mitochondrial HSO70 2; Swiss-Prot: sp|Q01899|HSP7M_PHAVU Heat shock 70 kDa protein, mitochondrial; TrEMBL-Plants: tr|V7BTF5|V7BTF5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0041900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:4944589..4947196) extracted from Lotus japonicus Gifu genome v1.2.
TTGTGTTTGTTGGACTTGTGTTGGTCATGTGTGGTTAGACCCATCATTATTCTGATGATAATTTCCATTGGTTGTGCAGT TTTCAGGCAGCACCAAGACAGCATATGTAGGTCGCAATTGGGCAAGTTTGTCTCGACCTTTTAGGTACCTTATGTTGTTT TGTGTTCATGTGTTACACGTATAATTATAGAAAGATATATTAATTTGGTGCTTTCGGTCTCTCACTGAATTTGCTTTGTA AAATTTGATACTTACTACAGTTCAAGGCCGGCTGGTAATGATGTCATTGGTATTGATTTGGGTACTACCAATTCATGTGT TTCTGTTATGGAGGGCAAGGCAAGATTTTCTTATTCTTAATTTTTTTTTAATATGTTTCATTACATTGTGTTTGTGACTT TGTGTTGACTGTTGGCTAATATTTATAACAATCTCAGAATGCCAAAGTTATTGAGAATTCTGAAGGAGCAAGGACAACGC CATCAGTTGTTGCCTTCAATCAGAAAGGAGAGCTGCTTGTAGGTACACCAGCCAAGCGTCAGGCTGTGACTAACCCAACA AATACTGTCTTTGTAACCAAGAGAATGATTGGTAGGCGATTTGATGATCCCCAAACTCAGAAGGAGATGAAGATGGTACC GTACAAAATTGTTAAGGCATCCAATGGAGATGCATGGGTTGAAGCCAACGGGAAGCAGTATTCTCCCAGCCAAATTGGTG CTTTTGTTCTCACCAAGATGAAGGAAACTGCTGAAGCGTACCTTGGAAAATCAGTTTCAAAAGCTGTGGTTACTGTACCA GCTTACTTCAATGACGCTCAGAGACAGGCTACGAAAGATGCCGGTAGAATTGCCGGTCTTGATGTCCAGAGAATTATCAA TGAGCCCACTGCTGCTGCACTTTCGTATGGTATGAACAACAAAGAGGGTCTCATTGCAGTTTTTGATCTTGGAGGTGGAA CATTTGATGTGTCCATCTTAGAAATTTCTAATGGAGTTTTTGAGGTATGAACATTAACTTTTTAATCCTTATTTCTTTAC ATCATTAGGAATCATGCGGGACATTGTTACTGATAAGATTTTGTTCAGGTTAAAGCAACAAATGGTGACACTTTCTTGGG AGGAGAGGATTTTGATAATACTCTATTGGACTATCTAGTGAGCGAATTCAAAAGAAGTGACAATATTGACCTTTCAAAGG ATAAGCTTGCCTTGCAAAGGCTTCGAGAAGCTGCTGAGAAAGCAAAAATAGAACTGTCGTCAACATCTCAAACAGATATA AATCTTCCATTTATCACTGCTGATGCATCTGGTGCAAAGCATCTGAACATCACATTGACTAGATCAAAGTTTGAAGCTTT AGTGAACAACTTGATTGAGAGGACAAGGGCACCATGTAAGAACTGCTTGAAGGATGCTAACATATCTCTCAAGGATGTTG ATGAGGTTCTTCTTGTTGGAGGGATGACTCGTGTACCTAAAGTACAAGAGGTTGTTCTAGAGATCTTTGGAAAGAGTCCT AGCAAAGGAGTAAATCCTGATGAGGCCGTTGCTATGGGAGCAGCTATCCAGGGCGGTATCCTACGTGGGGATGTCAAAGA ACTTCTACTCCTTGACGTAACTCCACTTTCTCTGGGTATTGAGACGTTGGGTGGTATCTTTACCAGGCTGATCAACAGGA ATACAACAATCCCTACTAAAAAGAGTCAGGTAATCCTTAAATGTTGATAATTACTTTTTCTACTTGCCAGACTCTTGAGA GGATTGAATTCAGTCTTTCAAGAGTAATGTAACATTGAAACGACACAATTATATGCTTTGTTGAACAACCCTTCCCCCAA ATAAATAAATAAAAAAGGTATCTTACAAAAATTCAAGGTGTTAAAGCGGAGAGCCACTGAAAGTAACTACATCTCTCTCT GGTTTGTAGATAGTTTAGACATTTCAGATGTTGACTCTAAATTTTGATATCAATGTTTCAGGTGTTTTCTACAGCTGCTG ACAACCAAACTCAGGTTGGTATCAAGGTGCTACAGGGTGAGCGAGAAATGGCTTCAGACAACAAAATGCTCGGCGAATTT GAGCTTAATGGCATTCCTCCCTCTCGAAGAGGTGTCCCTCAGATTGAAGTCACATTTGACATAGATGCCAATGGGATCGT TACTGTCTCTGCGAAAGACAAGGCCACCGGAAAAGAACAACAAGTCACCATCCGCTCAGACTCCAGACTCTCTGATGATG AGATTGAGAAGATGGTCAAAGAAGCAGAGTTGCATGCTCAGAAAGACCAAGAAAGAAAGGCTCTTATTGACATCAGAAAC AGTGCGGATACATCCATCTACAGCATTGAAAATAGCTTAAATGAGTACAGGGATAAGATTCCCAGTGAAGTGGCCAAAGA GATTGAAGATGCAGTTTCAGATTTGAGGAAGGCTATGGCAGGTGAGAATGCCGATGAGATTAAGTCAAAGCTTGATATTG CAAACAAAGCTGTGTCCAAAATCGGAGAGCACATGTCAGGTGGCAAAAGTAGCGGTCCCTCTGATGAAGGTTCTAAGGGT GAGGGCGATCAGGCCCCCGAGGCTGAGTACGAAGAGGTCAAGAAGTGA
CDS sequence (LotjaGi4g1v0041900.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGGGCAAGAATGCCAAAGTTATTGAGAATTCTGAAGGAGCAAGGACAACGCCATCAGTTGTTGCCTTCAATCAGAA AGGAGAGCTGCTTGTAGGTACACCAGCCAAGCGTCAGGCTGTGACTAACCCAACAAATACTGTCTTTGTAACCAAGAGAA TGATTGGTAGGCGATTTGATGATCCCCAAACTCAGAAGGAGATGAAGATGGTACCGTACAAAATTGTTAAGGCATCCAAT GGAGATGCATGGGTTGAAGCCAACGGGAAGCAGTATTCTCCCAGCCAAATTGGTGCTTTTGTTCTCACCAAGATGAAGGA AACTGCTGAAGCGTACCTTGGAAAATCAGTTTCAAAAGCTGTGGTTACTGTACCAGCTTACTTCAATGACGCTCAGAGAC AGGCTACGAAAGATGCCGGTAGAATTGCCGGTCTTGATGTCCAGAGAATTATCAATGAGCCCACTGCTGCTGCACTTTCG TATGGTATGAACAACAAAGAGGGTCTCATTGCAGTTTTTGATCTTGGAGGTGGAACATTTGATGTGTCCATCTTAGAAAT TTCTAATGGAGTTTTTGAGGTTAAAGCAACAAATGGTGACACTTTCTTGGGAGGAGAGGATTTTGATAATACTCTATTGG ACTATCTAGTGAGCGAATTCAAAAGAAGTGACAATATTGACCTTTCAAAGGATAAGCTTGCCTTGCAAAGGCTTCGAGAA GCTGCTGAGAAAGCAAAAATAGAACTGTCGTCAACATCTCAAACAGATATAAATCTTCCATTTATCACTGCTGATGCATC TGGTGCAAAGCATCTGAACATCACATTGACTAGATCAAAGTTTGAAGCTTTAGTGAACAACTTGATTGAGAGGACAAGGG CACCATGTAAGAACTGCTTGAAGGATGCTAACATATCTCTCAAGGATGTTGATGAGGTTCTTCTTGTTGGAGGGATGACT CGTGTACCTAAAGTACAAGAGGTTGTTCTAGAGATCTTTGGAAAGAGTCCTAGCAAAGGAGTAAATCCTGATGAGGCCGT TGCTATGGGAGCAGCTATCCAGGGCGGTATCCTACGTGGGGATGTCAAAGAACTTCTACTCCTTGACGTAACTCCACTTT CTCTGGGTATTGAGACGTTGGGTGGTATCTTTACCAGGCTGATCAACAGGAATACAACAATCCCTACTAAAAAGAGTCAG GTGTTTTCTACAGCTGCTGACAACCAAACTCAGGTTGGTATCAAGGTGCTACAGGGTGAGCGAGAAATGGCTTCAGACAA CAAAATGCTCGGCGAATTTGAGCTTAATGGCATTCCTCCCTCTCGAAGAGGTGTCCCTCAGATTGAAGTCACATTTGACA TAGATGCCAATGGGATCGTTACTGTCTCTGCGAAAGACAAGGCCACCGGAAAAGAACAACAAGTCACCATCCGCTCAGAC TCCAGACTCTCTGATGATGAGATTGAGAAGATGGTCAAAGAAGCAGAGTTGCATGCTCAGAAAGACCAAGAAAGAAAGGC TCTTATTGACATCAGAAACAGTGCGGATACATCCATCTACAGCATTGAAAATAGCTTAAATGAGTACAGGGATAAGATTC CCAGTGAAGTGGCCAAAGAGATTGAAGATGCAGTTTCAGATTTGAGGAAGGCTATGGCAGGTGAGAATGCCGATGAGATT AAGTCAAAGCTTGATATTGCAAACAAAGCTGTGTCCAAAATCGGAGAGCACATGTCAGGTGGCAAAAGTAGCGGTCCCTC TGATGAAGGTTCTAAGGGTGAGGGCGATCAGGCCCCCGAGGCTGAGTACGAAGAGGTCAAGAAGTGA
Protein sequence (LotjaGi4g1v0041900.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEGKNAKVIENSEGARTTPSVVAFNQKGELLVGTPAKRQAVTNPTNTVFVTKRMIGRRFDDPQTQKEMKMVPYKIVKASN GDAWVEANGKQYSPSQIGAFVLTKMKETAEAYLGKSVSKAVVTVPAYFNDAQRQATKDAGRIAGLDVQRIINEPTAAALS YGMNNKEGLIAVFDLGGGTFDVSILEISNGVFEVKATNGDTFLGGEDFDNTLLDYLVSEFKRSDNIDLSKDKLALQRLRE AAEKAKIELSSTSQTDINLPFITADASGAKHLNITLTRSKFEALVNNLIERTRAPCKNCLKDANISLKDVDEVLLVGGMT RVPKVQEVVLEIFGKSPSKGVNPDEAVAMGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQ VFSTAADNQTQVGIKVLQGEREMASDNKMLGEFELNGIPPSRRGVPQIEVTFDIDANGIVTVSAKDKATGKEQQVTIRSD SRLSDDEIEKMVKEAELHAQKDQERKALIDIRNSADTSIYSIENSLNEYRDKIPSEVAKEIEDAVSDLRKAMAGENADEI KSKLDIANKAVSKIGEHMSGGKSSGPSDEGSKGEGDQAPEAEYEEVKK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | 1 | 358 | 358 | 0.0 | – | |
| PANTHER | 1 | 606 | 606 | 0.0 | – | |
| PANTHER | 1 | 606 | 606 | 0.0 | ||
| Pfam | 1 | 578 | 578 | 6.4E-260 | ||
| TIGRFAM | 1 | 578 | 578 | 1.0E-272 | ||
| Hamap | 1 | 606 | 606 | 33.534 | ||
| Gene3D | 2 | 354 | 353 | 1.7E-149 | – | |
| SUPERFAMILY | 3 | 166 | 164 | 1.97E-53 | ||
| PRINTS | 13 | 25 | 13 | 3.1E-72 | – | |
| PRINTS | 36 | 44 | 9 | 3.1E-72 | – | |
| PRINTS | 120 | 140 | 21 | 3.1E-72 | – | |
| Gene3D | 162 | 342 | 181 | 1.7E-149 | – | |
| SUPERFAMILY | 167 | 358 | 192 | 2.72E-67 | ||
| ProSitePatterns | 172 | 185 | 14 | - | ||
| PRINTS | 178 | 188 | 11 | 3.1E-72 | – | |
| Gene3D | 205 | 292 | 88 | 1.7E-149 | – | |
| Coils | 228 | 255 | 28 | - | – | |
| PRINTS | 310 | 326 | 17 | 3.1E-72 | – | |
| ProSitePatterns | 313 | 327 | 15 | - | ||
| PRINTS | 341 | 361 | 21 | 3.1E-72 | – | |
| Gene3D | 355 | 481 | 127 | 1.7E-58 | ||
| SUPERFAMILY | 360 | 516 | 157 | 3.92E-60 | ||
| PRINTS | 364 | 383 | 20 | 3.1E-72 | – | |
| PRINTS | 445 | 461 | 17 | 3.1E-72 | – | |
| Gene3D | 483 | 581 | 99 | 1.5E-28 | ||
| Coils | 538 | 558 | 21 | - | – | |
| MobiDBLite | 571 | 608 | 38 | - | – | |
| MobiDBLite | 593 | 608 | 16 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein folding | The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure. | ||
| Molecular function | Unfolded protein binding | Interacting selectively and non-covalently with an unfolded protein. |
Expression pattern of LotjaGi4g1v0041900.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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