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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0095500 |
| Transcript ID | LotjaGi4g1v0095500.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Formin-like protein; TAIR: AT5G67470.1 formin homolog 6; Swiss-Prot: sp|Q9FJX6|FH6_ARATH Formin-like protein 6; TrEMBL-Plants: tr|I1MVM1|I1MVM1_SOYBN Formin-like protein; Found in the gene: LotjaGi4g1v0095500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:12750183..12756070) extracted from Lotus japonicus Gifu genome v1.2.
ACCATTACTATAAATTTATTGACAACCACAAAATGTAGCATGATAGTGGCTCATCTGGTCCTTTCGTGGTTAGTTATTTG CTGTTTTGTGGGAACATCCAAACAAGACAATTAGTCAAGATGGTCTAAAGCCAAAATTAAAATTTATTGAGACTTCCAGT CTTCCACAATCAAATTAACAATCTTTTATTTATTCACTTGTTATTCTAATGCAAAAAATATTGTAAAACAAGCCATTCGG ACGTGCAATTGCCAATCAACCACTGAGGTGAATCAAAGAAAAAGTAGCAAAATGAGCAGTAGTCGTTGGAGGCAGTAATT ATGACATCCTCAAAGATATTGTTGATGCTTTGCTCTCATTTGGTTACCATCAAAAGAGAACATATATAACATTTCTATAA TAAACTCATGATGATAAAGGAGAAGATCATCATATACATGAACGATCCATAAAGCTCAACAATCACATCATGATTCATTC ATATTACAAACCCAAATCTCACTGCCACGTCACATAACATTCCTCCTCACCATTTAGTTACTATCTGTGTCACGCTTTTT ACCCTTACCATCAAGTTTCCTCTCTCTGTTGGTTTTTTTCTTTCTTTGATTGCAGCAGAGAACAACGAAAACAAAACCAG ACATGTTTTATTGGGTGAAATGAAATTAAAGAGAAGAACACAACACAAAAATAACTCACCATGAAATTGAAACCTTATTT TTTGATCCTATTATCATTGTCTCTCTTCACTCCACTCAATAGTACTCCCAATGCAAGAAGAATCCTCCACCAACCGCTTT TCCCGGCGGGCTCCGCTCCGCCACCATCCACCCCTCCTCCGCCGCCACCAGACACTCCGTCGTCCCCCGACATCCCTTTC TTCAACGAGTACTCGCCACCGCCGCCGGACCAGGCCCTGACACAACCGCCGCCGTCGGCCTCAATTGCCTACCCGACGGC GACGAAACCGGCCAAGCCGGCAAAGAAAGTCGCAATTGCAGCCTCCGCGGCGGTTGTCACGGTGGCGGTTCTCTCCGCAC TCGCGTTCTTCTTGTACAAGCACAGGGCCAATTCCAATTCAAATCAAACCTCCTCAGAGAATCACAAACTCGTTGTCGAT GGTGGTGGTGGTCGTGGAAACTCTCGAAGGGTTCTAGATGATTCTCCGAGGGCCCCACCACCACCACCACCGTCGAGCTT CCTCTACATTGGAACTGTAGAGCCAAGCAGAACGTCGGTGAGCGACGCTCAAAATCTCAATTCTGCTAAGCTCGCTTCCA ATTACCGTTACCGGCCGAGCCCCGAGCTGCAACCGTTGCCGCCGTTGAGCAAACCCCCCGACGAGATCCACTCGCCGCCG GCAGCTTCTTCTTCCTCGCCGTCTTCGTCGGAGGATGCAGAAAGCCGTGAGACGGCGTTTCATTCGCCGCACGGGTCGTC GGTGAGCCACGACGACAACAACTATTACACGCCGGTTTCGCGCCACAGCTCTGTCGCCAACGGTAGCCCCGCCGCGGCGA CGGCGGTTCCGTTCTCGAAGAGGACTTCGCCGAAATCTCGGCTTTCTGCTTCGTCGCCGGATATCAGGCACGCCATGATT CCGTCCATTAAGCATAATCCCCTTCCTCCGCCGCCTGCGCCACCTGCGCCGCCGTCTACCCAATTGGACGGTGGTCCTTC CAGGAGGCCGAAATTTTCAACGCATCCTCCAGCGCCGAATATGGCTTCACTCAACACTCCTCCTCCTCCTCCTCCACCGC CACCGCCTCCGGCAGCAAGGAAGGTTTGGTCTCCGGCGATTACTACCATGCACTCGTCCTCTGTATCAAAGCAGCAACAA TCTTCATCTTCAATTGAAGGAGATGCTTCTTCCAATGGTGTGAGTTCAGTGAGTGTGAGCAAACCTTCAGAGGAAGGTGA ATCCATGATGGAAGGAGGAAAACCCAAGTTGAAGGCTCTGCATTGGGATAAAGTGCGTGCTACCTCAAACCGTGCCACTG TATGGAACCAGTTAAAATCAAGCTCATTTCAGTGAGTTAGCTACAACTACTACAACTCTTGATTTCTGGGTTGGTTTGTT CTATTTAGGATTGTGAGCTGAGAATGTTTGTTTCTGATATATGCAGGTTAAATGAGGACATGATGGAGACCTTGTTTGGC TTCAATTCTACAACAAATTCTGCTCCTAAAGAGACAACAACAACAAGTGTTGTTAGAAAACCAGTTTTCCCCCCAGTTGA ACAAGAGAATAGGGTGTTGGATCCCAAGAAATCACAAAACATTGCTATACTGCTCAGGGCACTGAATGTGACAAGAGATG AGGTATCAGAAGCTCTTTTAGATGGTAAGTTAATCTGTTCATTCTTTTCTATTTCTGGACAGTTATCATACTTTAGAGTT TAATTGCACCAAAGTGGACAAAACTTTGTCATATTGTGTTGTATTTCTCAATTGTCTAATTCCCTGATCTCAGGTGTTCA TGGGCTACACGGCAGTGCCATTGGCCACATGTGTGTCTATACATTGATGTTGTTTAATTATTTAGTACCAGTTTAAAAGC ACTAGTTCCAAAACGTGTAAAAAAATGTATATTTAGTGCACCAATGTATGATGCTGCAAATTTTTAAGTCTGAAGGGCAT ATATTTTACTCAGAATAGTTTAAGCCAACAAACAAATGAAACATGATGAATCCTTTTGAAAATGGAATACATAGCTTACT TAAGAAGAGTTTATTTATGATTACATCTCAAATCAAGTTTGAAAATTGCTAAGAAGCATCATGCCATGTCTATTATTAAG TTGTTTTAGTTGGTATGGAAAAACTTGGCAGTATAGCTGTATAGGTGCCAATTTGACAATGTCATATAAAATTCAGATCT GGCTCAGTAAACATGACGATCTGGTCATTAGCAATCAACATCATCTAGAAACTAGAAATAGTGAACAATGACCAATCATC CACCAAACACAGTTTGGATTTCAGTTTACAAAATAGAGTTTGGATCAAAGTGGGTTGGTTGTAATGTGATTTATGTTTGG ATTCTTTTATTTCAAAATAGAGTTTGGGGTTGAAAGTATGTTGGATGAATGTAAAAGTGACAATTTGGAGAGTTGAGATG AAAGTTGGTTTGGGGCTAAAAGTGGGTTGGGTGAATGTGGTTTTTAATTTGTCAAACATAGTGGCACAAAGTTACATAAG ACCCGAAAGTACTTTTGGATGCTCCCACTGAAAAACAAACACACCCTTTCCTTTATCAAATTGAGAAGCTGGATCTTTCT CCACTTCCAACTGAGAAAGATCTTATGTTCATTATCAAATTGTTTATTTCTCTCCTTTTTTTCTGAGCAATTATTGTTAT TAAACTTGACACTGCCCTTTCCATCACAATGGACCAGCCTAATACAGTAGTAATACTGCACCAGTGCTCCTCATCCATCA CCTAGCTTTTCCTTTTTTAGCTGTAACGGTCAAGTCCCCTAAAGGCAGTGCACCCCTGTTTTGAGTCTTGGCCGTCACAT GGTAAAGATAGATCATTTACTGTTTTCGCTCCTGTTCTCTAACTTTATATTCTGTGAGTGTATATATATATATATTGGTC GAACATTCTGTGAGTATATGATTTTGCTTTTTTATCTTTCTCTTGCTTCTCTGTCAGTATTCCTTTTATCCTTTTTGTTT CAGCAAATTGGCCATCTAACTTGTGAAACCGCTCTTGCTTGATATCAACTGGGAATAAATTAGCTACTCGTAGCTTCCCT ATAGTCCACAAATTATTATTCCAAGAAAAACTTTTTAATATGAATATATTGATGCACCTGAAATGAAACAGCTGTGTAAC TTAATAGCAAATCAGAAGAGACAATAATGTCTGAAACCGTCTCATCCATAATGAAGTTTTCCATCATATTCAACTTTCAG GGTCCCATTTTATGTTACTTCCAATTAGTGGTAAGTCTGTAAAATAGGTGAATTGTCTGAAATAAGTATTTACACCAACC AATATCTTTGGTTGTTTCTCTGATACATATGCTGTTTGTTTTTACCTTGAACTACTTACTAGTTTGTAACCACCGTTTTC ACTTTGCAAACATCATTTATTAGCTTTTTGGATGACACAGGAAATCCTGAAGGGTTGGGTGCTGAGCTATTGGAAACACT AGTGAAGATGGCTCCAACAAAGGAGGAAGAGATAAAACTAAAAAATTACGACGGCGACCTTTCAAAACTTGGGTCTGCGG AAAGATTTCTTAAAGCAGTGCTTGATATCCCTCTAGCTTTTAAAAGAGTTGAAGCCATGCTGTACAGAGCTAATTTTGAA ACAGAAGTTAACTACCTTAGGAAATCCTTTCAGACCTTGGAGGTGAGACTAGCTTTTATCAATCCATTGTTTTCTTTGAT GTTTACATTTTCTCCTGCCTCTTACTAACCAATCAGGTTTAATATCTATCAGGCAGCAAGTGAGGAATTGAAAAACAGCC GGTTATTCTTCAAACTTCTTGAAGCTGTTCTCAGGACAGGAAACAGAATGAATGTTGGCACCAATCGCGGTGATGCTAAG TCTTTCAAACTAGACACACTCCTAAAACTAGTAGATATAAAGGGAACAGATGGAAAGACCACATTGCTACACTTTGTGGT CCAAGAGATCATTAGATCTGAAGGTACAGGTGGTGAATCTGCAAATGAGAGTGTTCAAAACCAAACGAATTCCCAATTCA ATGAGGATGAGTTCAGAAAGAAAGGACTGCAGGTTGTGGCTGGACTGAGTAGAGACCTTGGTAATGTCAAAAAGGCAGCA GGAATGGACTCTGATGTCTTAAGCAGCTATGTATCAAAGCTTGAAATGGGGCTGGATAAAGTGAGATTGGTTTTGCAGTA TCAAAAGCCAGATATGCAAGGAAGCTTCTTTAACGCGACAGAGATATTTCTGAAAGATGCTGAGGAGAAAATTATTGTGA TCAAGGATGATGAGAGAAGGGCTTTGTTCCTTGTGAAAGAAGTTACAGAATACTTTCACGGGGATACGGCAAAAGAAGAA GCGCACCCTTTCAGAATTTTCATGATTGTAAGAGACTTTCTAAATATTCTTGATCAAGTATGCAAAGAAGTGGGAAGGAT GCAGGATAGGACTGTGATCGGTTCAGCCAGATCATTCAGGATAGCTGCAAATGCATCATTACCGGTTCTCAACAGGTACC ACGCAAGACAGGATAGAAGTTCAGATGAGGAAAGCTTATCTCCCTAGTGTTGTGAATATGAAAGAAATGACAGTCTCTCA GTATAACATTTAAAGTAAATGTCTATAACAGGATTTCTCCCATTACTTAGAGAATCCCATTCCACAAGTAGTAGTGAAGA ATTACAGCTTTCATTTAGACTGAAGAACAAACACGTAACAAAGATGGTGGGGTAGACAACAAGCTGTTCAGGGGATCCAT ACCATGTTTACTATCTACACTCAACTTCATAAGAAACTGTAATGAACTGTTAAATGGTAAGTGCATTAGTGCAAGACACG AATTTTTTTTTTTGATTCTGCTAATCAAACAAATATGCTGTAGTTCAGATAGATTTTATAGATTAGAGCCCCACACATCT TCATATTATAGAAGGTTTCCATTTTATATGTATTTTTTGAATCAACTATTAATAATAAGTAGCAGATTTGCAGAAGTTTC TTTATGTGTTTGCTGATTTTAGGGAGGAGATATAACTCGAATTGAGTAATTGGTATTTGGAGTAATTGAATAATAGAGGA AGGATTTGTATAGCATGATTTTGTTTACCCTTTAGAGTATGCATATGATATCTGGCTTCTTGTGAATGAGGATTGATTAT AATCGGTGGCTAGCAAAACTTTGATATTTGCTGACATCAAATAGAGGC
CDS sequence (LotjaGi4g1v0095500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAATTGAAACCTTATTTTTTGATCCTATTATCATTGTCTCTCTTCACTCCACTCAATAGTACTCCCAATGCAAGAAG AATCCTCCACCAACCGCTTTTCCCGGCGGGCTCCGCTCCGCCACCATCCACCCCTCCTCCGCCGCCACCAGACACTCCGT CGTCCCCCGACATCCCTTTCTTCAACGAGTACTCGCCACCGCCGCCGGACCAGGCCCTGACACAACCGCCGCCGTCGGCC TCAATTGCCTACCCGACGGCGACGAAACCGGCCAAGCCGGCAAAGAAAGTCGCAATTGCAGCCTCCGCGGCGGTTGTCAC GGTGGCGGTTCTCTCCGCACTCGCGTTCTTCTTGTACAAGCACAGGGCCAATTCCAATTCAAATCAAACCTCCTCAGAGA ATCACAAACTCGTTGTCGATGGTGGTGGTGGTCGTGGAAACTCTCGAAGGGTTCTAGATGATTCTCCGAGGGCCCCACCA CCACCACCACCGTCGAGCTTCCTCTACATTGGAACTGTAGAGCCAAGCAGAACGTCGGTGAGCGACGCTCAAAATCTCAA TTCTGCTAAGCTCGCTTCCAATTACCGTTACCGGCCGAGCCCCGAGCTGCAACCGTTGCCGCCGTTGAGCAAACCCCCCG ACGAGATCCACTCGCCGCCGGCAGCTTCTTCTTCCTCGCCGTCTTCGTCGGAGGATGCAGAAAGCCGTGAGACGGCGTTT CATTCGCCGCACGGGTCGTCGGTGAGCCACGACGACAACAACTATTACACGCCGGTTTCGCGCCACAGCTCTGTCGCCAA CGGTAGCCCCGCCGCGGCGACGGCGGTTCCGTTCTCGAAGAGGACTTCGCCGAAATCTCGGCTTTCTGCTTCGTCGCCGG ATATCAGGCACGCCATGATTCCGTCCATTAAGCATAATCCCCTTCCTCCGCCGCCTGCGCCACCTGCGCCGCCGTCTACC CAATTGGACGGTGGTCCTTCCAGGAGGCCGAAATTTTCAACGCATCCTCCAGCGCCGAATATGGCTTCACTCAACACTCC TCCTCCTCCTCCTCCACCGCCACCGCCTCCGGCAGCAAGGAAGGTTTGGTCTCCGGCGATTACTACCATGCACTCGTCCT CTGTATCAAAGCAGCAACAATCTTCATCTTCAATTGAAGGAGATGCTTCTTCCAATGGTGTGAGTTCAGTGAGTGTGAGC AAACCTTCAGAGGAAGGTGAATCCATGATGGAAGGAGGAAAACCCAAGTTGAAGGCTCTGCATTGGGATAAAGTGCGTGC TACCTCAAACCGTGCCACTGTATGGAACCAGTTAAAATCAAGCTCATTTCAGTTAAATGAGGACATGATGGAGACCTTGT TTGGCTTCAATTCTACAACAAATTCTGCTCCTAAAGAGACAACAACAACAAGTGTTGTTAGAAAACCAGTTTTCCCCCCA GTTGAACAAGAGAATAGGGTGTTGGATCCCAAGAAATCACAAAACATTGCTATACTGCTCAGGGCACTGAATGTGACAAG AGATGAGGTATCAGAAGCTCTTTTAGATGGAAATCCTGAAGGGTTGGGTGCTGAGCTATTGGAAACACTAGTGAAGATGG CTCCAACAAAGGAGGAAGAGATAAAACTAAAAAATTACGACGGCGACCTTTCAAAACTTGGGTCTGCGGAAAGATTTCTT AAAGCAGTGCTTGATATCCCTCTAGCTTTTAAAAGAGTTGAAGCCATGCTGTACAGAGCTAATTTTGAAACAGAAGTTAA CTACCTTAGGAAATCCTTTCAGACCTTGGAGGCAGCAAGTGAGGAATTGAAAAACAGCCGGTTATTCTTCAAACTTCTTG AAGCTGTTCTCAGGACAGGAAACAGAATGAATGTTGGCACCAATCGCGGTGATGCTAAGTCTTTCAAACTAGACACACTC CTAAAACTAGTAGATATAAAGGGAACAGATGGAAAGACCACATTGCTACACTTTGTGGTCCAAGAGATCATTAGATCTGA AGGTACAGGTGGTGAATCTGCAAATGAGAGTGTTCAAAACCAAACGAATTCCCAATTCAATGAGGATGAGTTCAGAAAGA AAGGACTGCAGGTTGTGGCTGGACTGAGTAGAGACCTTGGTAATGTCAAAAAGGCAGCAGGAATGGACTCTGATGTCTTA AGCAGCTATGTATCAAAGCTTGAAATGGGGCTGGATAAAGTGAGATTGGTTTTGCAGTATCAAAAGCCAGATATGCAAGG AAGCTTCTTTAACGCGACAGAGATATTTCTGAAAGATGCTGAGGAGAAAATTATTGTGATCAAGGATGATGAGAGAAGGG CTTTGTTCCTTGTGAAAGAAGTTACAGAATACTTTCACGGGGATACGGCAAAAGAAGAAGCGCACCCTTTCAGAATTTTC ATGATTGTAAGAGACTTTCTAAATATTCTTGATCAAGTATGCAAAGAAGTGGGAAGGATGCAGGATAGGACTGTGATCGG TTCAGCCAGATCATTCAGGATAGCTGCAAATGCATCATTACCGGTTCTCAACAGGTACCACGCAAGACAGGATAGAAGTT CAGATGAGGAAAGCTTATCTCCCTAG
Protein sequence (LotjaGi4g1v0095500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKLKPYFLILLSLSLFTPLNSTPNARRILHQPLFPAGSAPPPSTPPPPPPDTPSSPDIPFFNEYSPPPPDQALTQPPPSA SIAYPTATKPAKPAKKVAIAASAAVVTVAVLSALAFFLYKHRANSNSNQTSSENHKLVVDGGGGRGNSRRVLDDSPRAPP PPPPSSFLYIGTVEPSRTSVSDAQNLNSAKLASNYRYRPSPELQPLPPLSKPPDEIHSPPAASSSSPSSSEDAESRETAF HSPHGSSVSHDDNNYYTPVSRHSSVANGSPAAATAVPFSKRTSPKSRLSASSPDIRHAMIPSIKHNPLPPPPAPPAPPST QLDGGPSRRPKFSTHPPAPNMASLNTPPPPPPPPPPPAARKVWSPAITTMHSSSVSKQQQSSSSIEGDASSNGVSSVSVS KPSEEGESMMEGGKPKLKALHWDKVRATSNRATVWNQLKSSSFQLNEDMMETLFGFNSTTNSAPKETTTTSVVRKPVFPP VEQENRVLDPKKSQNIAILLRALNVTRDEVSEALLDGNPEGLGAELLETLVKMAPTKEEEIKLKNYDGDLSKLGSAERFL KAVLDIPLAFKRVEAMLYRANFETEVNYLRKSFQTLEAASEELKNSRLFFKLLEAVLRTGNRMNVGTNRGDAKSFKLDTL LKLVDIKGTDGKTTLLHFVVQEIIRSEGTGGESANESVQNQTNSQFNEDEFRKKGLQVVAGLSRDLGNVKKAAGMDSDVL SSYVSKLEMGLDKVRLVLQYQKPDMQGSFFNATEIFLKDAEEKIIVIKDDERRALFLVKEVTEYFHGDTAKEEAHPFRIF MIVRDFLNILDQVCKEVGRMQDRTVIGSARSFRIAANASLPVLNRYHARQDRSSDEESLSP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_NEGATIVE | 1 | 21 | 21 | - | – | |
| Phobius | 1 | 6 | 6 | - | – | |
| Phobius | 1 | 21 | 21 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 12 | 12 | - | – | |
| SignalP_EUK | 1 | 21 | 21 | - | – | |
| Phobius | 7 | 16 | 10 | - | – | |
| Phobius | 17 | 21 | 5 | - | – | |
| Phobius | 22 | 96 | 75 | - | – | |
| PANTHER | 24 | 859 | 836 | 0.0 | – | |
| PANTHER | 24 | 859 | 836 | 0.0 | – | |
| MobiDBLite | 32 | 86 | 55 | - | – | |
| MobiDBLite | 35 | 75 | 41 | - | – | |
| Phobius | 97 | 119 | 23 | - | – | |
| TMHMM | 97 | 119 | 23 | - | – | |
| Phobius | 120 | 861 | 742 | - | – | |
| MobiDBLite | 125 | 170 | 46 | - | – | |
| MobiDBLite | 191 | 415 | 225 | - | – | |
| MobiDBLite | 201 | 215 | 15 | - | – | |
| MobiDBLite | 219 | 233 | 15 | - | – | |
| MobiDBLite | 240 | 270 | 31 | - | – | |
| MobiDBLite | 304 | 321 | 18 | - | – | |
| MobiDBLite | 341 | 361 | 21 | - | – | |
| SUPERFAMILY | 347 | 822 | 476 | 3.92E-103 | – | |
| MobiDBLite | 366 | 403 | 38 | - | – | |
| SMART | 407 | 825 | 419 | 4.4E-124 | ||
| ProSiteProfiles | 407 | 836 | 430 | 54.218 | ||
| Pfam | 414 | 810 | 397 | 1.2E-118 | ||
| Gene3D | 480 | 825 | 346 | 1.7E-86 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0095500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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