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IPR042201

Description

IPR042201 is a Formin, FH2 domain superfamily.

<p>Formin homology (FH) proteins play a crucial role in the reorganisation of the actin cytoskeleton, which mediates various functions of the cell cortex including motility, adhesion, and cytokinesis [[cite:PUB00014909]]. Formins are multidomain proteins that interact with diverse signalling molecules and cytoskeletal proteins, although some formins have been assigned functions within the nucleus. Formins are characterised by the presence of three FH domains (FH1, FH2 and FH3), although members of the formin family do not necessarily contain all three domains [[cite:PUB00014910]]. The proline-rich FH1 domain mediates interactions with a variety of proteins, including the actin-binding protein profilin, SH3 (Src homology 3) domain proteins, and WW domain proteins. The FH2 domain is required for the self-association of formin proteins through the ability of FH2 domains to directly bind each other [[cite:PUB00014911]], and may also act to inhibit actin polymerisation [[cite:PUB00014912]]. The FH3 domain ([interpro:IPR010472]) is less well conserved and may be important for determining intracellular localisation of formin family proteins. In addition, some formins can contain a GTPase-binding domain (GBD) ([interpro:IPR010473]) required for binding to Rho small GTPases, and a C-terminal conserved Dia-autoregulatory domain (DAD).</p> <p>This superfamily represents the FH2 domain, which was shown by X-ray crystallography to have an elongated, crescent shape containing three helical subdomains [[cite:PUB00014913]].</p>

This description is obtained from EB-eye REST.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 36

Transcript Name Description Predicted domains Domain count
Formin-like protein; TAIR: AT1G70140.1 formin 8; Swiss-Prot: sp|O04532|FH8_ARATH Formin-like protein 8; TrEMBL-Plants: tr|V7B0Z2|V7B0Z2_PHAVU Formin-like protein; Found in the gene: LotjaGi1g1v0184800 16
Formin-like protein; TAIR: AT5G07740.3 actin binding protein; Swiss-Prot: sp|Q9FLQ7|FH20_ARATH Formin-like protein 20; TrEMBL-Plants: tr|A0A1J7J358|A0A1J7J358_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0193800_LC 23
Formin-like protein; TAIR: AT5G07740.2 actin binding protein; Swiss-Prot: sp|Q84ZL0|FH5_ORYSJ Formin-like protein 5; TrEMBL-Plants: tr|A0A0L9UBY4|A0A0L9UBY4_PHAAN Formin-like protein; Found in the gene: LotjaGi1g1v0193800_LC 16
Formin-like protein; TAIR: AT5G07740.1 actin binding protein; Swiss-Prot: sp|Q9FLQ7|FH20_ARATH Formin-like protein 20; TrEMBL-Plants: tr|A0A0S3RGK3|A0A0S3RGK3_PHAAN Formin-like protein; Found in the gene: LotjaGi1g1v0193800_LC 11
Formin-like protein; TAIR: AT5G07740.1 actin binding protein; Swiss-Prot: sp|Q9FLQ7|FH20_ARATH Formin-like protein 20; TrEMBL-Plants: tr|A0A0S3RGK3|A0A0S3RGK3_PHAAN Formin-like protein; Found in the gene: LotjaGi1g1v0193800_LC 11
Formin-like protein; TAIR: AT5G07740.1 actin binding protein; Swiss-Prot: sp|Q9FLQ7|FH20_ARATH Formin-like protein 20; TrEMBL-Plants: tr|K7KMH8|K7KMH8_SOYBN Formin-like protein; Found in the gene: LotjaGi1g1v0193800_LC 9
Formin-like protein; TAIR: AT5G07740.1 actin binding protein; Swiss-Prot: sp|Q9FLQ7|FH20_ARATH Formin-like protein 20; TrEMBL-Plants: tr|A0A072UVL3|A0A072UVL3_MEDTR Formin-like protein; Found in the gene: LotjaGi1g1v0193800_LC 23
Formin-like protein; TAIR: AT5G07740.1 actin binding protein; Swiss-Prot: sp|Q9FLQ7|FH20_ARATH Formin-like protein 20; TrEMBL-Plants: tr|A0A072UVL3|A0A072UVL3_MEDTR Formin-like protein; Found in the gene: LotjaGi1g1v0193800_LC 23
Formin-like protein; TAIR: AT5G07740.2 actin binding protein; Swiss-Prot: sp|Q84ZL0|FH5_ORYSJ Formin-like protein 5; TrEMBL-Plants: tr|A0A0L9UBY4|A0A0L9UBY4_PHAAN Formin-like protein; Found in the gene: LotjaGi1g1v0193800_LC 11
Formin-like protein; TAIR: AT5G07740.1 actin binding protein; Swiss-Prot: sp|Q9FLQ7|FH20_ARATH Formin-like protein 20; TrEMBL-Plants: tr|A0A072UVL3|A0A072UVL3_MEDTR Formin-like protein; Found in the gene: LotjaGi1g1v0193800_LC 23
Formin-like protein; TAIR: AT5G07740.3 actin binding protein; Swiss-Prot: sp|Q9FLQ7|FH20_ARATH Formin-like protein 20; TrEMBL-Plants: tr|A0A072UVL3|A0A072UVL3_MEDTR Formin-like protein; Found in the gene: LotjaGi1g1v0193800_LC 23
Formin-like protein; TAIR: AT5G07740.3 actin binding protein; Swiss-Prot: sp|Q9FLQ7|FH20_ARATH Formin-like protein 20; TrEMBL-Plants: tr|K7MKY5|K7MKY5_SOYBN Formin-like protein; Found in the gene: LotjaGi1g1v0194000 8
Formin-like protein; TAIR: AT5G07740.1 actin binding protein; Swiss-Prot: sp|Q9FLQ7|FH20_ARATH Formin-like protein 20; TrEMBL-Plants: tr|K7MKY5|K7MKY5_SOYBN Formin-like protein; Found in the gene: LotjaGi1g1v0194000 8
Formin-like protein; TAIR: AT3G25500.1 formin homology 1; Swiss-Prot: sp|Q9SE97|FH1_ARATH Formin-like protein 1; TrEMBL-Plants: tr|A2Q5W8|A2Q5W8_MEDTR Formin-like protein; Found in the gene: LotjaGi1g1v0490400 20
Formin-like protein; TAIR: AT1G70140.1 formin 8; Swiss-Prot: sp|O04532|FH8_ARATH Formin-like protein 8; TrEMBL-Plants: tr|A0A1J7GFD2|A0A1J7GFD2_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0313100 21
Formin-like protein; TAIR: AT1G31810.1 Formin Homology 14; Swiss-Prot: sp|Q7G6K7|FH3_ORYSJ Formin-like protein 3; TrEMBL-Plants: tr|A0A0B2PWC5|A0A0B2PWC5_GLYSO Formin-like protein; Found in the gene: LotjaGi2g1v0341400 11
Formin-like protein; TAIR: AT1G31810.1 Formin Homology 14; Swiss-Prot: sp|Q7G6K7|FH3_ORYSJ Formin-like protein 3; TrEMBL-Plants: tr|B9GZX5|B9GZX5_POPTR Formin-like protein; Found in the gene: LotjaGi2g1v0341400 16
Formin-like protein; TAIR: AT1G31810.1 Formin Homology 14; Swiss-Prot: sp|Q7G6K7|FH3_ORYSJ Formin-like protein 3; TrEMBL-Plants: tr|V4T3R4|V4T3R4_9ROSI Formin-like protein; Found in the gene: LotjaGi2g1v0341400 9
Formin-like protein; TAIR: AT1G31810.1 Formin Homology 14; Swiss-Prot: sp|Q9C6S1|FH14_ARATH Formin-like protein 14; TrEMBL-Plants: tr|I1JVV3|I1JVV3_SOYBN Formin-like protein; Found in the gene: LotjaGi2g1v0344300 23
Formin-like protein; TAIR: AT1G31810.1 Formin Homology 14; Swiss-Prot: sp|Q7G6K7|FH3_ORYSJ Formin-like protein 3; TrEMBL-Plants: tr|M5WXW5|M5WXW5_PRUPE Formin-like protein; Found in the gene: LotjaGi2g1v0344300 11
Formin-like protein; TAIR: AT5G67470.1 formin homolog 6; Swiss-Prot: sp|Q9FJX6|FH6_ARATH Formin-like protein 6; TrEMBL-Plants: tr|I1LH70|I1LH70_SOYBN Formin-like protein; Found in the gene: LotjaGi2g1v0408500 16
Formin-like protein; TAIR: AT5G67470.1 formin homolog 6; Swiss-Prot: sp|Q9FJX6|FH6_ARATH Formin-like protein 6; TrEMBL-Plants: tr|A0A151SC56|A0A151SC56_CAJCA Formin-like protein; Found in the gene: LotjaGi2g1v0408500 9
Formin-like protein; TAIR: AT5G54650.1 formin homology5; Swiss-Prot: sp|Q94B77|FH5_ARATH Formin-like protein 5; TrEMBL-Plants: tr|B9SA03|B9SA03_RICCO Formin-like protein; Found in the gene: LotjaGi3g1v0094500_LC 19
Formin-like protein; TAIR: AT5G54650.1 formin homology5; Swiss-Prot: sp|Q94B77|FH5_ARATH Formin-like protein 5; TrEMBL-Plants: tr|G7IKM7|G7IKM7_MEDTR Formin-like protein; Found in the gene: LotjaGi3g1v0192700 19
Formin-like protein; TAIR: AT3G25500.1 formin homology 1; Swiss-Prot: sp|Q9SE97|FH1_ARATH Formin-like protein 1; TrEMBL-Plants: tr|A0A0L9TFX6|A0A0L9TFX6_PHAAN Formin-like protein; Found in the gene: LotjaGi3g1v0392400 19
Formin-like protein; TAIR: AT4G15200.1 formin 3; Swiss-Prot: sp|O23373|FH3_ARATH Formin-like protein 3; TrEMBL-Plants: tr|A0A1J7HPP8|A0A1J7HPP8_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0462400 20
Formin-like protein; TAIR: AT2G43800.1 Actin-binding FH2 (formin homology 2) family protein; Swiss-Prot: sp|O22824|FH2_ARATH Formin-like protein 2; TrEMBL-Plants: tr|A0A0L9TN14|A0A0L9TN14_PHAAN Formin-like protein; Found in the gene: LotjaGi4g1v0066900 21
Formin-like protein; TAIR: AT5G67470.1 formin homolog 6; Swiss-Prot: sp|Q9FJX6|FH6_ARATH Formin-like protein 6; TrEMBL-Plants: tr|I1MVM1|I1MVM1_SOYBN Formin-like protein; Found in the gene: LotjaGi4g1v0095500 20
Formin-like protein; TAIR: AT5G67470.1 formin homolog 6; Swiss-Prot: sp|Q9FJX6|FH6_ARATH Formin-like protein 6; TrEMBL-Plants: tr|A0A151RXT6|A0A151RXT6_CAJCA Formin-like protein; Found in the gene: LotjaGi4g1v0095500 9
Formin-like protein; TAIR: AT1G70140.1 formin 8; Swiss-Prot: sp|O04532|FH8_ARATH Formin-like protein 8; TrEMBL-Plants: tr|I1KXL9|I1KXL9_SOYBN Formin-like protein; Found in the gene: LotjaGi4g1v0176500 21
Formin-like protein; TAIR: AT5G07740.1 actin binding protein; Swiss-Prot: sp|Q9FLQ7|FH20_ARATH Formin-like protein 20; TrEMBL-Plants: tr|K7KMH8|K7KMH8_SOYBN Formin-like protein; Found in the gene: LotjaGi4g1v0251500_LC 23
Formin-like protein; TAIR: AT5G58160.1 actin binding protein; Swiss-Prot: sp|Q9LVN1|FH13_ARATH Formin-like protein 13; TrEMBL-Plants: tr|K7K9Q8|K7K9Q8_SOYBN Formin-like protein; Found in the gene: LotjaGi4g1v0287200 24
Formin-like protein; TAIR: AT5G58160.1 actin binding protein; Swiss-Prot: sp|Q9LVN1|FH13_ARATH Formin-like protein 13; TrEMBL-Plants: tr|K7K9Q8|K7K9Q8_SOYBN Formin-like protein; Found in the gene: LotjaGi4g1v0287200 26
Formin-like protein; TAIR: AT2G25050.1 actin-binding FH2 (formin 2) family protein; Swiss-Prot: sp|Q9SK28|FH18_ARATH Formin-like protein 18; TrEMBL-Plants: tr|G7I7N1|G7I7N1_MEDTR Formin-like protein; Found in the gene: LotjaGi5g1v0051200_LC 23
Formin-like protein; TAIR: AT2G25050.1 actin-binding FH2 (formin 2) family protein; Swiss-Prot: sp|Q6ZCX3|FH6_ORYSJ Formin-like protein 6; TrEMBL-Plants: tr|G7I7N1|G7I7N1_MEDTR Formin-like protein; Found in the gene: LotjaGi5g1v0051200_LC 26
Formin-like protein; TAIR: AT3G05470.1 Actin-binding FH2 (formin homology 2) family protein; Swiss-Prot: sp|Q9MA60|FH11_ARATH Formin-like protein 11; TrEMBL-Plants: tr|G7I8P1|G7I8P1_MEDTR Formin-like protein; Found in the gene: LotjaGi5g1v0222900 15

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 2.78