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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR042201
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We have found 36 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.921s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi1g1v0184800.1
n.a. Formin-like protein; TAIR: AT1G70140.1 formin 8; Swiss-Prot: sp|O04532|FH8_ARATH Formin-like protein 8; TrEMBL-Plants: tr|V7B0Z2|V7B0Z2_PHAVU Formin-like protein; Found in the gene: LotjaGi1g1v0184800 LjG1.1_chr1 36175144 36179151 +
2 domain predictions
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LotjaGi1g1v0193800_LC.1
n.a. Formin-like protein; TAIR: AT5G07740.3 actin binding protein; Swiss-Prot: sp|Q9FLQ7|FH20_ARATH Formin-like protein 20; TrEMBL-Plants: tr|A0A1J7J358|A0A1J7J358_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0193800_LC LjG1.1_chr1 38325116 38344182 +
2 domain predictions
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LotjaGi1g1v0193800_LC.10
n.a. Formin-like protein; TAIR: AT5G07740.2 actin binding protein; Swiss-Prot: sp|Q84ZL0|FH5_ORYSJ Formin-like protein 5; TrEMBL-Plants: tr|A0A0L9UBY4|A0A0L9UBY4_PHAAN Formin-like protein; Found in the gene: LotjaGi1g1v0193800_LC LjG1.1_chr1 38325335 38344083 +
2 domain predictions
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LotjaGi1g1v0193800_LC.11
n.a. Formin-like protein; TAIR: AT5G07740.1 actin binding protein; Swiss-Prot: sp|Q9FLQ7|FH20_ARATH Formin-like protein 20; TrEMBL-Plants: tr|A0A0S3RGK3|A0A0S3RGK3_PHAAN Formin-like protein; Found in the gene: LotjaGi1g1v0193800_LC LjG1.1_chr1 38325335 38344083 +
2 domain predictions
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LotjaGi1g1v0193800_LC.13
n.a. Formin-like protein; TAIR: AT5G07740.1 actin binding protein; Swiss-Prot: sp|Q9FLQ7|FH20_ARATH Formin-like protein 20; TrEMBL-Plants: tr|A0A0S3RGK3|A0A0S3RGK3_PHAAN Formin-like protein; Found in the gene: LotjaGi1g1v0193800_LC LjG1.1_chr1 38327294 38344083 +
2 domain predictions
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LotjaGi1g1v0193800_LC.14
n.a. Formin-like protein; TAIR: AT5G07740.1 actin binding protein; Swiss-Prot: sp|Q9FLQ7|FH20_ARATH Formin-like protein 20; TrEMBL-Plants: tr|K7KMH8|K7KMH8_SOYBN Formin-like protein; Found in the gene: LotjaGi1g1v0193800_LC LjG1.1_chr1 38335916 38344083 +
2 domain predictions
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LotjaGi1g1v0193800_LC.3
n.a. Formin-like protein; TAIR: AT5G07740.1 actin binding protein; Swiss-Prot: sp|Q9FLQ7|FH20_ARATH Formin-like protein 20; TrEMBL-Plants: tr|A0A072UVL3|A0A072UVL3_MEDTR Formin-like protein; Found in the gene: LotjaGi1g1v0193800_LC LjG1.1_chr1 38325116 38344182 +
2 domain predictions
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LotjaGi1g1v0193800_LC.4
n.a. Formin-like protein; TAIR: AT5G07740.1 actin binding protein; Swiss-Prot: sp|Q9FLQ7|FH20_ARATH Formin-like protein 20; TrEMBL-Plants: tr|A0A072UVL3|A0A072UVL3_MEDTR Formin-like protein; Found in the gene: LotjaGi1g1v0193800_LC LjG1.1_chr1 38325116 38344182 +
2 domain predictions
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LotjaGi1g1v0193800_LC.5
n.a. Formin-like protein; TAIR: AT5G07740.2 actin binding protein; Swiss-Prot: sp|Q84ZL0|FH5_ORYSJ Formin-like protein 5; TrEMBL-Plants: tr|A0A0L9UBY4|A0A0L9UBY4_PHAAN Formin-like protein; Found in the gene: LotjaGi1g1v0193800_LC LjG1.1_chr1 38325116 38344182 +
2 domain predictions
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LotjaGi1g1v0193800_LC.6
n.a. Formin-like protein; TAIR: AT5G07740.1 actin binding protein; Swiss-Prot: sp|Q9FLQ7|FH20_ARATH Formin-like protein 20; TrEMBL-Plants: tr|A0A072UVL3|A0A072UVL3_MEDTR Formin-like protein; Found in the gene: LotjaGi1g1v0193800_LC LjG1.1_chr1 38325256 38344078 +
2 domain predictions
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LotjaGi1g1v0193800_LC.9
n.a. Formin-like protein; TAIR: AT5G07740.3 actin binding protein; Swiss-Prot: sp|Q9FLQ7|FH20_ARATH Formin-like protein 20; TrEMBL-Plants: tr|A0A072UVL3|A0A072UVL3_MEDTR Formin-like protein; Found in the gene: LotjaGi1g1v0193800_LC LjG1.1_chr1 38325335 38344083 +
2 domain predictions
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LotjaGi1g1v0194000.1
n.a. Formin-like protein; TAIR: AT5G07740.3 actin binding protein; Swiss-Prot: sp|Q9FLQ7|FH20_ARATH Formin-like protein 20; TrEMBL-Plants: tr|K7MKY5|K7MKY5_SOYBN Formin-like protein; Found in the gene: LotjaGi1g1v0194000 LjG1.1_chr1 38357335 38376202 +
2 domain predictions
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LotjaGi1g1v0194000.2
n.a. Formin-like protein; TAIR: AT5G07740.1 actin binding protein; Swiss-Prot: sp|Q9FLQ7|FH20_ARATH Formin-like protein 20; TrEMBL-Plants: tr|K7MKY5|K7MKY5_SOYBN Formin-like protein; Found in the gene: LotjaGi1g1v0194000 LjG1.1_chr1 38357335 38400933 +
2 domain predictions
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LotjaGi1g1v0490400.1
n.a. Formin-like protein; TAIR: AT3G25500.1 formin homology 1; Swiss-Prot: sp|Q9SE97|FH1_ARATH Formin-like protein 1; TrEMBL-Plants: tr|A2Q5W8|A2Q5W8_MEDTR Formin-like protein; Found in the gene: LotjaGi1g1v0490400 LjG1.1_chr1 100390508 100395891 +
2 domain predictions
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LotjaGi2g1v0313100.1
n.a. Formin-like protein; TAIR: AT1G70140.1 formin 8; Swiss-Prot: sp|O04532|FH8_ARATH Formin-like protein 8; TrEMBL-Plants: tr|A0A1J7GFD2|A0A1J7GFD2_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0313100 LjG1.1_chr2 78791429 78794697 -
2 domain predictions
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LotjaGi2g1v0341400.1
n.a. Formin-like protein; TAIR: AT1G31810.1 Formin Homology 14; Swiss-Prot: sp|Q7G6K7|FH3_ORYSJ Formin-like protein 3; TrEMBL-Plants: tr|A0A0B2PWC5|A0A0B2PWC5_GLYSO Formin-like protein; Found in the gene: LotjaGi2g1v0341400 LjG1.1_chr2 81827377 81846079 +
2 domain predictions
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LotjaGi2g1v0341400.5
n.a. Formin-like protein; TAIR: AT1G31810.1 Formin Homology 14; Swiss-Prot: sp|Q7G6K7|FH3_ORYSJ Formin-like protein 3; TrEMBL-Plants: tr|B9GZX5|B9GZX5_POPTR Formin-like protein; Found in the gene: LotjaGi2g1v0341400 LjG1.1_chr2 81831942 81842155 +
2 domain predictions
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LotjaGi2g1v0341400.6
n.a. Formin-like protein; TAIR: AT1G31810.1 Formin Homology 14; Swiss-Prot: sp|Q7G6K7|FH3_ORYSJ Formin-like protein 3; TrEMBL-Plants: tr|V4T3R4|V4T3R4_9ROSI Formin-like protein; Found in the gene: LotjaGi2g1v0341400 LjG1.1_chr2 81831942 81842155 +
2 domain predictions
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LotjaGi2g1v0344300.1
n.a. Formin-like protein; TAIR: AT1G31810.1 Formin Homology 14; Swiss-Prot: sp|Q9C6S1|FH14_ARATH Formin-like protein 14; TrEMBL-Plants: tr|I1JVV3|I1JVV3_SOYBN Formin-like protein; Found in the gene: LotjaGi2g1v0344300 LjG1.1_chr2 82147565 82157165 +
2 domain predictions
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LotjaGi2g1v0344300.2
n.a. Formin-like protein; TAIR: AT1G31810.1 Formin Homology 14; Swiss-Prot: sp|Q7G6K7|FH3_ORYSJ Formin-like protein 3; TrEMBL-Plants: tr|M5WXW5|M5WXW5_PRUPE Formin-like protein; Found in the gene: LotjaGi2g1v0344300 LjG1.1_chr2 82153059 82156401 +
2 domain predictions
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LotjaGi2g1v0408500.1
n.a. Formin-like protein; TAIR: AT5G67470.1 formin homolog 6; Swiss-Prot: sp|Q9FJX6|FH6_ARATH Formin-like protein 6; TrEMBL-Plants: tr|I1LH70|I1LH70_SOYBN Formin-like protein; Found in the gene: LotjaGi2g1v0408500 LjG1.1_chr2 90567992 90573312 +
2 domain predictions
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LotjaGi2g1v0408500.2
n.a. Formin-like protein; TAIR: AT5G67470.1 formin homolog 6; Swiss-Prot: sp|Q9FJX6|FH6_ARATH Formin-like protein 6; TrEMBL-Plants: tr|A0A151SC56|A0A151SC56_CAJCA Formin-like protein; Found in the gene: LotjaGi2g1v0408500 LjG1.1_chr2 90571483 90572630 +
2 domain predictions
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LotjaGi3g1v0094500_LC.1
n.a. Formin-like protein; TAIR: AT5G54650.1 formin homology5; Swiss-Prot: sp|Q94B77|FH5_ARATH Formin-like protein 5; TrEMBL-Plants: tr|B9SA03|B9SA03_RICCO Formin-like protein; Found in the gene: LotjaGi3g1v0094500_LC LjG1.1_chr3 11710746 11718405 +
2 domain predictions
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LotjaGi3g1v0192700.1
n.a. Formin-like protein; TAIR: AT5G54650.1 formin homology5; Swiss-Prot: sp|Q94B77|FH5_ARATH Formin-like protein 5; TrEMBL-Plants: tr|G7IKM7|G7IKM7_MEDTR Formin-like protein; Found in the gene: LotjaGi3g1v0192700 LjG1.1_chr3 27814890 27819921 +
2 domain predictions
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LotjaGi3g1v0392400.1
n.a. Formin-like protein; TAIR: AT3G25500.1 formin homology 1; Swiss-Prot: sp|Q9SE97|FH1_ARATH Formin-like protein 1; TrEMBL-Plants: tr|A0A0L9TFX6|A0A0L9TFX6_PHAAN Formin-like protein; Found in the gene: LotjaGi3g1v0392400 LjG1.1_chr3 79118426 79123968 +
2 domain predictions
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LotjaGi3g1v0462400.1
n.a. Formin-like protein; TAIR: AT4G15200.1 formin 3; Swiss-Prot: sp|O23373|FH3_ARATH Formin-like protein 3; TrEMBL-Plants: tr|A0A1J7HPP8|A0A1J7HPP8_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0462400 LjG1.1_chr3 87742916 87749453 +
2 domain predictions
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LotjaGi4g1v0066900.1
n.a. Formin-like protein; TAIR: AT2G43800.1 Actin-binding FH2 (formin homology 2) family protein; Swiss-Prot: sp|O22824|FH2_ARATH Formin-like protein 2; TrEMBL-Plants: tr|A0A0L9TN14|A0A0L9TN14_PHAAN Formin-like protein; Found in the gene: LotjaGi4g1v0066900 LjG1.1_chr4 8358679 8363610 -
2 domain predictions
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LotjaGi4g1v0095500.1
n.a. Formin-like protein; TAIR: AT5G67470.1 formin homolog 6; Swiss-Prot: sp|Q9FJX6|FH6_ARATH Formin-like protein 6; TrEMBL-Plants: tr|I1MVM1|I1MVM1_SOYBN Formin-like protein; Found in the gene: LotjaGi4g1v0095500 LjG1.1_chr4 12750183 12756070 -
2 domain predictions
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LotjaGi4g1v0095500.2
n.a. Formin-like protein; TAIR: AT5G67470.1 formin homolog 6; Swiss-Prot: sp|Q9FJX6|FH6_ARATH Formin-like protein 6; TrEMBL-Plants: tr|A0A151RXT6|A0A151RXT6_CAJCA Formin-like protein; Found in the gene: LotjaGi4g1v0095500 LjG1.1_chr4 12750824 12752058 -
2 domain predictions
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LotjaGi4g1v0176500.1
n.a. Formin-like protein; TAIR: AT1G70140.1 formin 8; Swiss-Prot: sp|O04532|FH8_ARATH Formin-like protein 8; TrEMBL-Plants: tr|I1KXL9|I1KXL9_SOYBN Formin-like protein; Found in the gene: LotjaGi4g1v0176500 LjG1.1_chr4 35864777 35868813 +
2 domain predictions
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LotjaGi4g1v0251500_LC.1
n.a. Formin-like protein; TAIR: AT5G07740.1 actin binding protein; Swiss-Prot: sp|Q9FLQ7|FH20_ARATH Formin-like protein 20; TrEMBL-Plants: tr|K7KMH8|K7KMH8_SOYBN Formin-like protein; Found in the gene: LotjaGi4g1v0251500_LC LjG1.1_chr4 60494804 60510073 -
2 domain predictions
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LotjaGi4g1v0287200.1
n.a. Formin-like protein; TAIR: AT5G58160.1 actin binding protein; Swiss-Prot: sp|Q9LVN1|FH13_ARATH Formin-like protein 13; TrEMBL-Plants: tr|K7K9Q8|K7K9Q8_SOYBN Formin-like protein; Found in the gene: LotjaGi4g1v0287200 LjG1.1_chr4 65948566 65959576 -
2 domain predictions
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LotjaGi4g1v0287200.2
n.a. Formin-like protein; TAIR: AT5G58160.1 actin binding protein; Swiss-Prot: sp|Q9LVN1|FH13_ARATH Formin-like protein 13; TrEMBL-Plants: tr|K7K9Q8|K7K9Q8_SOYBN Formin-like protein; Found in the gene: LotjaGi4g1v0287200 LjG1.1_chr4 65949230 65959567 -
2 domain predictions
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LotjaGi5g1v0051200_LC.1
n.a. Formin-like protein; TAIR: AT2G25050.1 actin-binding FH2 (formin 2) family protein; Swiss-Prot: sp|Q9SK28|FH18_ARATH Formin-like protein 18; TrEMBL-Plants: tr|G7I7N1|G7I7N1_MEDTR Formin-like protein; Found in the gene: LotjaGi5g1v0051200_LC LjG1.1_chr5 8663452 8675818 -
2 domain predictions
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LotjaGi5g1v0051200_LC.2
n.a. Formin-like protein; TAIR: AT2G25050.1 actin-binding FH2 (formin 2) family protein; Swiss-Prot: sp|Q6ZCX3|FH6_ORYSJ Formin-like protein 6; TrEMBL-Plants: tr|G7I7N1|G7I7N1_MEDTR Formin-like protein; Found in the gene: LotjaGi5g1v0051200_LC LjG1.1_chr5 8663453 8677464 -
2 domain predictions
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LotjaGi5g1v0222900.1
n.a. Formin-like protein; TAIR: AT3G05470.1 Actin-binding FH2 (formin homology 2) family protein; Swiss-Prot: sp|Q9MA60|FH11_ARATH Formin-like protein 11; TrEMBL-Plants: tr|G7I8P1|G7I8P1_MEDTR Formin-like protein; Found in the gene: LotjaGi5g1v0222900 LjG1.1_chr5 52972568 52977023 -
2 domain predictions
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