Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0097300 |
| Transcript ID | LotjaGi4g1v0097300.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein kinase; TAIR: AT5G67380.1 casein kinase alpha 1; Swiss-Prot: sp|Q08467|CSK21_ARATH Casein kinase II subunit alpha-1; TrEMBL-Plants: tr|A0A0L9TPJ8|A0A0L9TPJ8_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0097300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:13158211..13164165) extracted from Lotus japonicus Gifu genome v1.2.
TTTCCATTTAAAAAAAATTGTCAAAGATTTGGTCCAAGTTGGAAATTGAATGCAGACAGAGGACGAGTGAGTTTTGCCGC GCGGGAAGAAAAATGATGACAATCAAAATCAATCCTCAAAATCAAAACATGTGCAAATATCTCCACACGCGCCTTAACTA TCCCCACAACAACCCACCCGCGCTACTCCTCCGCTTCTTCCTACTCTCCACACTAGTAGCGCCGCTCGCGCAACCTCCAA ACCCGCGCACCACCACCACCGTCCCCCAGATCCATCGCCGCCGCCGAGCCATGTCGAAGGCGCGTGTCTACACCGATGTC AACGTTCTTCGCCCCAAGGAGTACTGGGACTACGAGTCTCTCGCCATTCAATGGGGGTAATCATCAATCATATGCCGAGT TTTAGGGTTTCTGTGTTGTGTTATCATATGTGATTTGAACCAGTGTTGTCAAATAGCGGTTATAGCCGCGCCATAGCGCT ATATTTTCCGCTTTAAGAGGCTGGAAATAGCGGATTTTTGGCTTACCGCTATAGTCCGCGATCCGCGATTAACAACACTG ATTTGTGTTGACCAAAATTAAAATGTTACTAATTGCTGGTGTTTTTTTGTTTTCTCTGGATTCCTGATTAATGTTATGTA TGGAGTTTACTTTTCAGTGAACAAGATAATTATGAGGTTGTGAGGAAAGTGGGAAGGGGGAAGTACAGTGAGGTTTTCGA AGGCGTAAATGTTAATACCAATGAGCCCTGTGTAATGAAGATTCTCAAGCCTGTGAAGAAAAAGAAGGTCAGCTTTTGTT TATGATACTAATGTTGTATGCTAGCTTTCCTTTGGGATGTAAGGATTATGAATAAAGCCAGCCATTGGTGCTTTTTCCTG AACTATTCTCCTAAAATTTGCTGTACAATGAGTAATGCTGTAATTTATACACACAAAAAAGAATTTCTCATATACTCTTT ACAATCTTCTTTGTATTGGATTACAACTCTAGCACTTTGCGGAATCTCCCTAACACAGTTTACAACAGTTGTTTCGGATA TAAACAAGTAACTTGAGTTTATCATAAGGAGACATAATATAATAGAATTTCAAACATGGAGATTTATAGAATATCAATAT TAGGCAAAAAACTTCTATCGAATAATAAACAACAGGCATATCAATATTGAAATCGTAGTTCATAATCTAATTTTATAGCA TGGTTGTGATACCACCATCTGAGATCTTTAACATTATTTTGCAGATTAAAAGAGAGATAAAAATACTTCAGAACCTCTGT GGAGGACCAAATATTGTCAAGCTTCTTGATATTGTCAGAGATCAACACTCTAAAACTCCAAGCTTAATATTTGAGCATGT CAACAGTACAGATTTTAAAGTTCTGTATCCGACTTTGGCTGATTGTGACATACGCTATTACATATATCAGCTTCTGAAGG TAATGTAATTCTTCGCTCTCGTGTTACTCTTGGGATGCTGCTCTTCGTGTCCTCTCCATTATAAATATATTATTTGGTAA AACTAAAAGTAATTGAAATATTGAATCTTGGGTAAGGCTTATATTAATTATGCATCTAATTTACGTGTGTAAGCTTTTGC TTATGCATCAATGCATCATGAAATTATTCTTCATGTGTGCAAGAGATGTTTAGAACCTTTTCGTGTTACATGAATGCTTT TTAGTTTTGAATCGTAGGCTTTAGATTACTGCCATTCTCAAGGCATAATGCACAGAGATGTCAAGCCTCATAATGTAATG ATCGATCATGAATTTCATAAACTTCGCTTGATAGATTGGGGTCTTGCTGAATTTTATCATCCTGGAAAGGAATATAATGT TCGTGTGGCTTCAAGGTAATGTTCTCAGACCAATTTTTAAAAGTCCAGAAAGATATGTAAAATGGATGAACCAGAGTATA TTACTATATTGCTAAAATCAAAATCAGTAAGGCATCATTAGCATGTTCAAGCATGATTTTTTCAAAGACTAGATTATTGA AAACTTTGTGTGCCAAGTATCGATATATCCATAAATGTCATTCTGAAGATTTCGAGACAACCAACAGTGAGAAAGACTTG CAAAAAGATTTCTACTTTGGTCAAGGGAGATGTGGCCTTCATTGCTACTAAACATAGTGGAACTGAATACTTGCAAAAAG ATTGTAGCAAATACTTACACTTCTACCAATTTATGCTTGATAAATATTTCATACAAATTCCAAAATAGAGTTTGAATAAA TCACCCTTTTTAATTATATCAAGATTCTCAATCCCTTAAGACCTTTTGATTCTAGTTTCTTGTGAAGGTCTCTCCTATGT TCACTGTGCTATTATATTTTCAGCTACATTTTTTGTTTAATCTTAAGAGACTCGTATTTTATAAACAACAATTAGACTTT TATTTCTGAAGCTTATAATACACAATATGCCCTAAATCGTGCTTTACAGAATACTTGTATAAGATTAATGTGTAATGTAT TGTGAAATGCCACTCATGGGGGTGTTTAGGCTTATTTTTCGCTGACAGTCTGACACTGATGCCATCTGACATTTATGATA GCCGGATGAAGCAGATCAATGAAAAGTATGTCAAAAGTGACCAAATGATTATGTGACCCTGATTTCTTTATTTAATTACC CTTCCCAGTTCCCACTTAGCAATTTGAAAGGATATGAGTCTATTAGGCCTAGCTGAAGATATTAAGAGTGTTTAGAACTT AGAAGTCCCACATTGACTAGAGATATGGCCAAACAAGTGTTTATAAAGGGTAAAGCAACCCTAACCACTAAGCTAGCTGT TGGGGTATAGTTAAGCCTAACTTGAATTCTAAGAAAGAGCACAAAGATTAGTCTTCATTGCCATGTGCAAGTGCTGTAAG CAGAAGGAATAAGCAAGAAGATAAAGGAGTTCCAAGAATTGAGGTTTTTGTTCTAGTTTAGTGGTATTCTGCTTTATAGT TTCCAACTAGGCTCCTAGTTTTGGTTCTTGTTAGTAGCATGTTTCAGGTTCCTAGTCTAACACTTATCTTTAATCATATA AGCATTCTTAGCTTCTTTCCAGGCCATTGTTAATTTACTGTTGACATTTTTTTATTTTGTTTGTAATTTGCTGATATTTG TTAGTTTGGTATAAACTTGACTACATGACTACGGTTGTTTAAATTTTCCTAGACTTATATGCTATTGTTGTGTGAGGATT AGTTTTGGGTTTTCAAGTTATTGAATGACACTGACAATATATTTGATGTGCTATGCTTTCTTTCTCAGACACTTTAAGGG CCCTGAACTTCTAGTAGATTTGCAAGACTATGACTACTCATTAGACATGTGGAGCCTGGGTTGCATGTTTGCTGGAATGG TAAGATTTACAGCTACAGGTTACAATTTACTGGTTATGTGGTATTCCCTTTGGCATTTTTATGTGAAATCTAATTTTGAA TATACATGTGCAAAATCATGTAACTCTGGTTTATGATAATTTTACTTCATGTAGATATTTCGCAAGGAACCTTTCTTTTG TGGTCAGGACAACAACGATCAGCTTGTAAAAATAGCTAAGGTAACAATCATGGCGGTTTGCAACAATGTATAAAATTTTC GAAGTTATCATGTTGATGCCATGCAAGTTAACGCAATGTTTTAGTTTTGACTGCATAGTTTGAAAACACTGGTGGCATTT TTTGTAATTATTAGTAATATATTAAGACTGAGCTAGAGGGCAATGCCATGTCACTTCAGCTATATGTTTGCCACATAATT GTTTTAGCTAGCTCACAAATAATCTAATGTTCAAACTACATAAATCCTAACATATCTCCTCGATGCAATTGCATCTGAAT TGCCCCACCTTTTTTTCTGTACGTTACTATGTATCCCAAATCCATCAACATTCTGACTCAGTGCAGTCCATCGAATCCTA GCAAGACTCTTTGGTTTCTACTGTGTGCAGTTCGAGACCACTCTCCCACCATGACCAACTGCTCTGAATGTTGACAATAG CATTCTCTATGCCAGTTTCCTGGTTGCCCTCCACCAAATAAGTTTTCTCGAGATCTGGGAGGGTGTCTGAAATGAGGAGC CATGGATATGGCTTGACAGTGAGTGTTTCAAGCTTGAGATTCCTTTTGAAGACATTTCAGAGGCTAATCATGGGTATCTT TTCAGCAATGTCAAACTCAGCAACTCCCACTCAAATATCTTCAAAAATATTTCTACCTCATACGATAATTACAATGTATT TGAAAACAATAAAATGTAATTTTAAATATGTTGTATGTGATCTGCAGGTGCTTGGGACTGATGAATTGAATGCATATCTG AATAAGTATCATCTTGTGATTGACCCTGAACTTGATGCTCTACTTGGAAGGTAATATGATTTAGTGAGTTAGCAACTCCT CTATAATATATTCCTTGGCAATGCAATTGTATCTCTATGAGCTCTCCTTAAAATGTTTGCTGCTTTTGTTTTAACTTTAT TTCCTCTTGGTAGATATGTGAAGAAGTATTACTGATTTCATTGTTATGCTATTTCCGGTTGCAGTCACAGTCGCAAGCCT TGGACTAAATTTATCAATTCCCATAATCAGCATCTTGTGTCTCCAGAGGTCATTTAATCTATTCCCATTATGGCATTAAG ACCAAAAACAATTTTTATGTAAGGATTTTACTTATTTCATTATATTCAATATGCAGGCAATCGATTTTCTTGATAAGCTT CTTCGATATGACCACCAGGACAGGCTAACGGCAAGAGAAGCAATGGTAATAAAGAGCTCATTTATTCACCGCAACATGGT TCTTCTTCTGTTGTGTTAGTACCTTAATTTACACAGTACTTCATTATTGTTTGCTGTAACTTTTTGTTGTTGACTATTCT GTAGGAACATCCATATTTCTCTCTGGTTAGGGCAGCAGAAAATAGCTCTATGAGAACACAGTAACTTCATATGTGGAATC ATAAACCCGAATTCATATATGTGGGACTGTTTTCTAATACCCTAACAGGCGGTATGGTTGGTTGCCTTAGTTATAGCCGG TTAGTTTTCTTGTGGATTATATATCAATTTCATTATCTTTGTTCAGTTGAATAATTTGTTAACATGTCGTTGAAAATTAA AATTATGTCTTAAAATTATAAGGGCGTGATTGGTTTTGTTTAAATTTTAGTATTTCTCAAATTTTTCTTGCACAAGATGC TGATTATAAATTATTTTAAATACAAGATTAACTAATGTGTTTAAACTTAAAGAGTTTATGCTTGCCAGAGATCTGTCTGA TTCATCCGGTACGTTAGTGCATGTTTGGTTTGGCGTTAGAGTCACACAAACGTGATTTCATGCATCTCAATACATCAAAA AAGAAGTTAGAATTGACTATGCTGAGTTTAAGATGAATCGGATAAACATGATATTGACACGTTAATTTCAATATTGATGC TCATTGAGTTCGACGAGAATCTAAAGTTCATGTGTCTCTAACCAACTACAGGGGGGAAGTTCATTCTGATTATGTGTTAT ATACTTATATTCAACCTTTTCTAGTAACTGGTAAAATATATCCCAATATAATAATGGTGTAAGTGACAAAGTCGTGATAA ACATAGGAAATGAGGTAGAATTCAGTGATCCAGTAAATGCCAATAAAAAACATGGTTGTGGATTGGAGGGCCTCTCCCAC GCCCAACAATGAGCCCTCCTCCACCCCATTTCCGTGAGCTTAATCCTCCAGCTCATCCTCCTGGTTCGGGGCTGGAACAA ACAATACAAATGAATGTCTCGTTGGGGTTGGTTTTTAGTTAGCATTTTTTAAAGAATAAAAAAGTAGTTTTAGTTTTTCT TTTTATATTTTTTAAGTTTCAAAAATATTATTATTGACTTAATAAATTCATAGGAGTCAATACCATTGTCAACTTTATAA ATTTATGATAGAAAGGGGTGGCAGCAAAACTGTAG
CDS sequence (LotjaGi4g1v0097300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATGACAATCAAAATCAATCCTCAAAATCAAAACATGTGCAAATATCTCCACACGCGCCTTAACTATCCCCACAACAA CCCACCCGCGCTACTCCTCCGCTTCTTCCTACTCTCCACACTAGTAGCGCCGCTCGCGCAACCTCCAAACCCGCGCACCA CCACCACCGTCCCCCAGATCCATCGCCGCCGCCGAGCCATGTCGAAGGCGCGTGTCTACACCGATGTCAACGTTCTTCGC CCCAAGGAGTACTGGGACTACGAGTCTCTCGCCATTCAATGGGGTGAACAAGATAATTATGAGGTTGTGAGGAAAGTGGG AAGGGGGAAGTACAGTGAGGTTTTCGAAGGCGTAAATGTTAATACCAATGAGCCCTGTGTAATGAAGATTCTCAAGCCTG TGAAGAAAAAGAAGATTAAAAGAGAGATAAAAATACTTCAGAACCTCTGTGGAGGACCAAATATTGTCAAGCTTCTTGAT ATTGTCAGAGATCAACACTCTAAAACTCCAAGCTTAATATTTGAGCATGTCAACAGTACAGATTTTAAAGTTCTGTATCC GACTTTGGCTGATTGTGACATACGCTATTACATATATCAGCTTCTGAAGGCTTTAGATTACTGCCATTCTCAAGGCATAA TGCACAGAGATGTCAAGCCTCATAATGTAATGATCGATCATGAATTTCATAAACTTCGCTTGATAGATTGGGGTCTTGCT GAATTTTATCATCCTGGAAAGGAATATAATGTTCGTGTGGCTTCAAGACACTTTAAGGGCCCTGAACTTCTAGTAGATTT GCAAGACTATGACTACTCATTAGACATGTGGAGCCTGGGTTGCATGTTTGCTGGAATGATATTTCGCAAGGAACCTTTCT TTTGTGGTCAGGACAACAACGATCAGCTTGTAAAAATAGCTAAGGTGCTTGGGACTGATGAATTGAATGCATATCTGAAT AAGTATCATCTTGTGATTGACCCTGAACTTGATGCTCTACTTGGAAGTCACAGTCGCAAGCCTTGGACTAAATTTATCAA TTCCCATAATCAGCATCTTGTGTCTCCAGAGGCAATCGATTTTCTTGATAAGCTTCTTCGATATGACCACCAGGACAGGC TAACGGCAAGAGAAGCAATGGAACATCCATATTTCTCTCTGGTTAGGGCAGCAGAAAATAGCTCTATGAGAACACAGTAA
Protein sequence (LotjaGi4g1v0097300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MMTIKINPQNQNMCKYLHTRLNYPHNNPPALLLRFFLLSTLVAPLAQPPNPRTTTTVPQIHRRRRAMSKARVYTDVNVLR PKEYWDYESLAIQWGEQDNYEVVRKVGRGKYSEVFEGVNVNTNEPCVMKILKPVKKKKIKREIKILQNLCGGPNIVKLLD IVRDQHSKTPSLIFEHVNSTDFKVLYPTLADCDIRYYIYQLLKALDYCHSQGIMHRDVKPHNVMIDHEFHKLRLIDWGLA EFYHPGKEYNVRVASRHFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFCGQDNNDQLVKIAKVLGTDELNAYLN KYHLVIDPELDALLGSHSRKPWTKFINSHNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMEHPYFSLVRAAENSSMRTQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 46 | 46 | - | – | |
| Phobius | 1 | 29 | 29 | - | – | |
| Phobius | 30 | 41 | 12 | - | – | |
| Phobius | 42 | 46 | 5 | - | – | |
| Phobius | 47 | 399 | 353 | - | – | |
| PANTHER | 65 | 399 | 335 | 3.1E-222 | – | |
| PANTHER | 65 | 399 | 335 | 3.1E-222 | – | |
| SUPERFAMILY | 72 | 386 | 315 | 4.59E-76 | ||
| CDD | 81 | 385 | 305 | 0.0 | – | |
| Gene3D | 100 | 176 | 77 | 2.3E-110 | – | |
| ProSiteProfiles | 100 | 385 | 286 | 42.336 | ||
| Pfam | 100 | 385 | 286 | 1.2E-65 | ||
| SMART | 100 | 385 | 286 | 1.5E-75 | ||
| ProSitePatterns | 106 | 129 | 24 | - | ||
| Gene3D | 177 | 385 | 209 | 2.3E-110 | – | |
| ProSitePatterns | 213 | 225 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi4g1v0097300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…