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Field | Value |
---|---|
Gene ID | LotjaGi4g1v0097300 |
Transcript ID | LotjaGi4g1v0097300.2 |
Related isoforms 1 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Protein kinase; TAIR: AT3G50000.1 casein kinase II, alpha chain 2; Swiss-Prot: sp|Q08466|CSK22_ARATH Casein kinase II subunit alpha-2; TrEMBL-Plants: tr|A0A0D2RBR0|A0A0D2RBR0_GOSRA Uncharacterized protein; Found in the gene: LotjaGi4g1v0097300 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:13158501..13162044) extracted from Lotus japonicus Gifu genome v1.2.
ATGTCGAAGGCGCGTGTCTACACCGATGTCAACGTTCTTCGCCCCAAGGAGTACTGGGACTACGAGTCTCTCGCCATTCA ATGGGGGTAATCATCAATCATATGCCGAGTTTTAGGGTTTCTGTGTTGTGTTATCATATGTGATTTGAACCAGTGTTGTC AAATAGCGGTTATAGCCGCGCCATAGCGCTATATTTTCCGCTTTAAGAGGCTGGAAATAGCGGATTTTTGGCTTACCGCT ATAGTCCGCGATCCGCGATTAACAACACTGATTTGTGTTGACCAAAATTAAAATGTTACTAATTGCTGGTGTTTTTTTGT TTTCTCTGGATTCCTGATTAATGTTATGTATGGAGTTTACTTTTCAGTGAACAAGATAATTATGAGGTTGTGAGGAAAGT GGGAAGGGGGAAGTACAGTGAGGTTTTCGAAGGCGTAAATGTTAATACCAATGAGCCCTGTGTAATGAAGATTCTCAAGC CTGTGAAGAAAAAGAAGGTCAGCTTTTGTTTATGATACTAATGTTGTATGCTAGCTTTCCTTTGGGATGTAAGGATTATG AATAAAGCCAGCCATTGGTGCTTTTTCCTGAACTATTCTCCTAAAATTTGCTGTACAATGAGTAATGCTGTAATTTATAC ACACAAAAAAGAATTTCTCATATACTCTTTACAATCTTCTTTGTATTGGATTACAACTCTAGCACTTTGCGGAATCTCCC TAACACAGTTTACAACAGTTGTTTCGGATATAAACAAGTAACTTGAGTTTATCATAAGGAGACATAATATAATAGAATTT CAAACATGGAGATTTATAGAATATCAATATTAGGCAAAAAACTTCTATCGAATAATAAACAACAGGCATATCAATATTGA AATCGTAGTTCATAATCTAATTTTATAGCATGGTTGTGATACCACCATCTGAGATCTTTAACATTATTTTGCAGATTAAA AGAGAGATAAAAATACTTCAGAACCTCTGTGGAGGACCAAATATTGTCAAGCTTCTTGATATTGTCAGAGATCAACACTC TAAAACTCCAAGCTTAATATTTGAGCATGTCAACAGTACAGATTTTAAAGTTCTGTATCCGACTTTGGCTGATTGTGACA TACGCTATTACATATATCAGCTTCTGAAGGTAATGTAATTCTTCGCTCTCGTGTTACTCTTGGGATGCTGCTCTTCGTGT CCTCTCCATTATAAATATATTATTTGGTAAAACTAAAAGTAATTGAAATATTGAATCTTGGGTAAGGCTTATATTAATTA TGCATCTAATTTACGTGTGTAAGCTTTTGCTTATGCATCAATGCATCATGAAATTATTCTTCATGTGTGCAAGAGATGTT TAGAACCTTTTCGTGTTACATGAATGCTTTTTAGTTTTGAATCGTAGGCTTTAGATTACTGCCATTCTCAAGGCATAATG CACAGAGATGTCAAGCCTCATAATGTAATGATCGATCATGAATTTCATAAACTTCGCTTGATAGATTGGGGTCTTGCTGA ATTTTATCATCCTGGAAAGGAATATAATGTTCGTGTGGCTTCAAGGTAATGTTCTCAGACCAATTTTTAAAAGTCCAGAA AGATATGTAAAATGGATGAACCAGAGTATATTACTATATTGCTAAAATCAAAATCAGTAAGGCATCATTAGCATGTTCAA GCATGATTTTTTCAAAGACTAGATTATTGAAAACTTTGTGTGCCAAGTATCGATATATCCATAAATGTCATTCTGAAGAT TTCGAGACAACCAACAGTGAGAAAGACTTGCAAAAAGATTTCTACTTTGGTCAAGGGAGATGTGGCCTTCATTGCTACTA AACATAGTGGAACTGAATACTTGCAAAAAGATTGTAGCAAATACTTACACTTCTACCAATTTATGCTTGATAAATATTTC ATACAAATTCCAAAATAGAGTTTGAATAAATCACCCTTTTTAATTATATCAAGATTCTCAATCCCTTAAGACCTTTTGAT TCTAGTTTCTTGTGAAGGTCTCTCCTATGTTCACTGTGCTATTATATTTTCAGCTACATTTTTTGTTTAATCTTAAGAGA CTCGTATTTTATAAACAACAATTAGACTTTTATTTCTGAAGCTTATAATACACAATATGCCCTAAATCGTGCTTTACAGA ATACTTGTATAAGATTAATGTGTAATGTATTGTGAAATGCCACTCATGGGGGTGTTTAGGCTTATTTTTCGCTGACAGTC TGACACTGATGCCATCTGACATTTATGATAGCCGGATGAAGCAGATCAATGAAAAGTATGTCAAAAGTGACCAAATGATT ATGTGACCCTGATTTCTTTATTTAATTACCCTTCCCAGTTCCCACTTAGCAATTTGAAAGGATATGAGTCTATTAGGCCT AGCTGAAGATATTAAGAGTGTTTAGAACTTAGAAGTCCCACATTGACTAGAGATATGGCCAAACAAGTGTTTATAAAGGG TAAAGCAACCCTAACCACTAAGCTAGCTGTTGGGGTATAGTTAAGCCTAACTTGAATTCTAAGAAAGAGCACAAAGATTA GTCTTCATTGCCATGTGCAAGTGCTGTAAGCAGAAGGAATAAGCAAGAAGATAAAGGAGTTCCAAGAATTGAGGTTTTTG TTCTAGTTTAGTGGTATTCTGCTTTATAGTTTCCAACTAGGCTCCTAGTTTTGGTTCTTGTTAGTAGCATGTTTCAGGTT CCTAGTCTAACACTTATCTTTAATCATATAAGCATTCTTAGCTTCTTTCCAGGCCATTGTTAATTTACTGTTGACATTTT TTTATTTTGTTTGTAATTTGCTGATATTTGTTAGTTTGGTATAAACTTGACTACATGACTACGGTTGTTTAAATTTTCCT AGACTTATATGCTATTGTTGTGTGAGGATTAGTTTTGGGTTTTCAAGTTATTGAATGACACTGACAATATATTTGATGTG CTATGCTTTCTTTCTCAGACACTTTAAGGGCCCTGAACTTCTAGTAGATTTGCAAGACTATGACTACTCATTAGACATGT GGAGCCTGGGTTGCATGTTTGCTGGAATGGTAAGATTTACAGCTACAGGTTACAATTTACTGGTTATGTGGTATTCCCTT TGGCATTTTTATGTGAAATCTAATTTTGAATATACATGTGCAAAATCATGTAACTCTGGTTTATGATAATTTTACTTCAT GTAGATATTTCGCAAGGAACCTTTCTTTTGTGGTCAGGACAACAACGATCAGCTTGTAAAAATAGCTAAGGTAACAATCA TGGCGGTTTGCAACAATGTATAAAATTTTCGAAGTTATCATGTTGATGCCATGCAAGTTAACGCAATGTTTTAGTTTTGA CTGCATAGTTTGAAAACACTGGTGGCATTTTTTGTAATTATTAGTAATATATTAAGACTGAGCTAGAGGGCAATGCCATG TCACTTCAGCTATATGTTTGCCACATAATTGTTTTAGCTAGCTCACAAATAATCTAATGTTCAAACTACATAAATCCTAA CATATCTCCTCGATGCAATTGCAT
CDS sequence (LotjaGi4g1v0097300.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCGAAGGCGCGTGTCTACACCGATGTCAACGTTCTTCGCCCCAAGGAGTACTGGGACTACGAGTCTCTCGCCATTCA ATGGGGTGAACAAGATAATTATGAGGTTGTGAGGAAAGTGGGAAGGGGGAAGTACAGTGAGGTTTTCGAAGGCGTAAATG TTAATACCAATGAGCCCTGTGTAATGAAGATTCTCAAGCCTGTGAAGAAAAAGAAGATTAAAAGAGAGATAAAAATACTT CAGAACCTCTGTGGAGGACCAAATATTGTCAAGCTTCTTGATATTGTCAGAGATCAACACTCTAAAACTCCAAGCTTAAT ATTTGAGCATGTCAACAGTACAGATTTTAAAGTTCTGTATCCGACTTTGGCTGATTGTGACATACGCTATTACATATATC AGCTTCTGAAGGCTTTAGATTACTGCCATTCTCAAGGCATAATGCACAGAGATGTCAAGCCTCATAATGTAATGATCGAT CATGAATTTCATAAACTTCGCTTGATAGATTGGGGTCTTGCTGAATTTTATCATCCTGGAAAGGAATATAATGTTCGTGT GGCTTCAAGACACTTTAAGGGCCCTGAACTTCTAGTAGATTTGCAAGACTATGACTACTCATTAGACATGTGGAGCCTGG GTTGCATGTTTGCTGGAATGATATTTCGCAAGGAACCTTTCTTTTGTGGTCAGGACAACAACGATCAGCTTGTAAAAATA GCTAAGTTAACGCAATGTTTTAGTTTTGACTGCATAGTTTGA
Protein sequence (LotjaGi4g1v0097300.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSKARVYTDVNVLRPKEYWDYESLAIQWGEQDNYEVVRKVGRGKYSEVFEGVNVNTNEPCVMKILKPVKKKKIKREIKIL QNLCGGPNIVKLLDIVRDQHSKTPSLIFEHVNSTDFKVLYPTLADCDIRYYIYQLLKALDYCHSQGIMHRDVKPHNVMID HEFHKLRLIDWGLAEFYHPGKEYNVRVASRHFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFCGQDNNDQLVKI AKLTQCFSFDCIV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 1 | 243 | 243 | 1.0E-166 | – | |
PANTHER | 1 | 243 | 243 | 1.0E-166 | – | |
SUPERFAMILY | 9 | 243 | 235 | 7.69E-64 | ||
CDD | 15 | 243 | 229 | 1.99235E-160 | – | |
Gene3D | 34 | 110 | 77 | 2.1E-83 | – | |
SMART | 34 | 252 | 219 | 5.4E-45 | ||
Pfam | 34 | 245 | 212 | 6.8E-55 | ||
ProSiteProfiles | 34 | 253 | 220 | 36.767 | ||
ProSitePatterns | 40 | 63 | 24 | - | ||
Gene3D | 111 | 245 | 135 | 2.1E-83 | – | |
ProSitePatterns | 147 | 159 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi4g1v0097300.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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