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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0371500 |
| Transcript ID | LotjaGi4g1v0371500.2 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Adenosylhomocysteinase; TAIR: AT4G13940.1 S-adenosyl-L-homocysteine hydrolase; Swiss-Prot: sp|O23255|SAHH1_ARATH Adenosylhomocysteinase 1; TrEMBL-Plants: tr|I1KS65|I1KS65_SOYBN Adenosylhomocysteinase; Found in the gene: LotjaGi4g1v0371500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:75089818..75091814) extracted from Lotus japonicus Gifu genome v1.2.
ATGGCTTTGTTGGTCGAGAAAACCACATCTGGCCGCGAGTACAAGGTCAAGGACCTCTCTCAGGCCGACTTCGGCCGCCT CGAGCTCGAGCTCGCCGAGGTCGAGATGCCCGGCCTCATGGCCTGCCGTACCGAGTTCGGCCCTGCTCAGCCCTTCAAAG GCGCTAGAATCACCGGATCCCTCCACATGACCATTCAAACCGCCGTCCTCATTGAAACCCTCACCGCCCTCGGCGCCGAG GTTCGCTGGTGCTCCTGCAACATCTTCTCCACCCAGGACCACGCCGCCGCTGCCATCGCCCGCGATAGCGCTGCGGTTTT CGCCTGGAAGGGTGAGACCCTCCAGGAGTACTGGTGGTGCACCGAGCGTGCCCTCGACTGGGGTCCCGGTGGTGGTCCCG ATCTCATCGTTGATGATGGAGGTGACGCTACCCTCCTCATCCACGAGGGGGTTAAGGCTGAGGAGGTGTTCGAGAAGACC GGTGAGCTTCCCGACCCGACTTCCACCGACAACCCTGAGTTCCAGATCGTGCTTACCATCATCAGGGATGGGTTGAAGAC TGACTCCCATAGGTACCGCAAGATGAAGGAGAGGCTCGTCGGTGTCTCGGAGGAGACCACCACCGGAGTCAAGAGGCTTT ACCAGATGCAGGCCAATGGAACTCTCTTGTTCCCTGCTATCAATGTCAATGACTCTGTCACCAAGAGCAAGGTCTGTTTT CTCTCCCCTTTTTGCTAGATCTGTTTGTGTTTCTCAATTTTGGATCAAGGGTTTGGTTTTTGTTTTCGTTGTAGATTCAG ATCTGTTTTGTCTTGTGTTTTTTGCTGTTCGAAATTCAGATCCACCAAGTGTTTGATGTATGTCTTGAATGAAGTTTGAT CTGTATATTTGTATGCAATTGATATTGATAGGCTTCAGATCTTAAGAAACAACAAATGGGTCATTGAATTTTCATCTAAT ATACTTGTATTGATTGCTGATGATTCTTTAGGGTCAGTGGGTGTTTGATATTTGTCATGAATGAAGTTTTGTCTGTGTAT AGTAGTGTGCAATTGATATGGTTTTGCTTCAGATCTTAAGAAACAACAAGTTGGTCATTGGATTTTCATGTACGTTACTT GTATTGATTGATCATGATTCTTGTGGTAATTGGATCTGGTTAATTATATGTCGGTTTTGTTTGTTGTTGTTGTGTCCTTT TCTTGTCTAACAGTTTGTTTTTTGTGTATTTGATATGTTGGTTGTAACAGTTTGACAACTTGTATGGATGCCGTCACTCT CTCCCTGATGGTCTGATGAGGGCTACCGATATTATGATTGCTGGGAAGGTGGCTGTTGTGGCTGGATATGGAGATGTCGG CAAGGGTTGTGCTGCTGCTTTGAAACAAGCTGGTGCTCGTGTCATTGTGACTGAGATTGATCCCATCTGTGCCCTTCAGG CTCTCATGGAAGGTCTTCAGGTTCTGACCCTGGAGGATGTTGTCTCTGAGGCTGATATCTTTGTCACCACCACCGGTAAC AAGGACATCATCATGGTTGACCACATGAGGAAGATGAAGAACAATGCCATTGTCTGCAACATTGGTCACTTTGACAATGA AATCGACATGCTTGGTCTTGAGAGCTACCCTGGTGTGAAGCGCATCACCATCAAACCTCAAACTGATAGGTTCGTCTTCC CCGAGACCAACACCGGCATCATTGTCTTGGCCGAGGGTCGTCTGATGAACTTGGGCTGCGCCACAGGGCACCCCAGTTTC GTGATGTCCTGCTCCTTCACCAACCAGGTCATTGCTCAGCTTGAGCTGTGGAATGAGAGGAACTCTGGCAAGTACAAGAA GGAGGTTTACGTTTTGCCCAAGCATCTTGATGAGAAGGTGGCTGCACTTCACCTTGGCAAGCTTGGAGCTAGGCTCACCA AGCTCAGCAAGGATCAAGCTGATTACATCAGTGTGCCTGTTGAGGGCCCATACAAGCCTCTTCACTACAGGTACTGA
CDS sequence (LotjaGi4g1v0371500.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTTTGTTGGTCGAGAAAACCACATCTGGCCGCGAGTACAAGGTCAAGGACCTCTCTCAGGCCGACTTCGGCCGCCT CGAGCTCGAGCTCGCCGAGGTCGAGATGCCCGGCCTCATGGCCTGCCGTACCGAGTTCGGCCCTGCTCAGCCCTTCAAAG GCGCTAGAATCACCGGATCCCTCCACATGACCATTCAAACCGCCGTCCTCATTGAAACCCTCACCGCCCTCGGCGCCGAG GTTCGCTGGTGCTCCTGCAACATCTTCTCCACCCAGGACCACGCCGCCGCTGCCATCGCCCGCGATAGCGCTGCGGTTTT CGCCTGGAAGGGTGAGACCCTCCAGGAGTACTGGTGGTGCACCGAGCGTGCCCTCGACTGGGGTCCCGGTGGTGGTCCCG ATCTCATCGTTGATGATGGAGGTGACGCTACCCTCCTCATCCACGAGGGGGTTAAGGCTGAGGAGGTGTTCGAGAAGACC GGTGAGCTTCCCGACCCGACTTCCACCGACAACCCTGAGTTCCAGATCGTGCTTACCATCATCAGGGATGGGTTGAAGAC TGACTCCCATAGGTACCGCAAGATGAAGGAGAGGCTCGTCGGTGTCTCGGAGGAGACCACCACCGGAGTCAAGAGGCTTT ACCAGATGCAGGCCAATGGAACTCTCTTGTTCCCTGCTATCAATGTCAATGACTCTGTCACCAAGAGCAAGTTTGACAAC TTGTATGGATGCCGTCACTCTCTCCCTGATGGTCTGATGAGGGCTACCGATATTATGATTGCTGGGAAGGTGGCTGTTGT GGCTGGATATGGAGATGTCGGCAAGGGTTGTGCTGCTGCTTTGAAACAAGCTGGTGCTCGTGTCATTGTGACTGAGATTG ATCCCATCTGTGCCCTTCAGGCTCTCATGGAAGGTCTTCAGGTTCTGACCCTGGAGGATGTTGTCTCTGAGGCTGATATC TTTGTCACCACCACCGACATGCTTGGTCTTGAGAGCTACCCTGGTGTGAAGCGCATCACCATCAAACCTCAAACTGATAG GTTCGTCTTCCCCGAGACCAACACCGGCATCATTGTCTTGGCCGAGGGTCGTCTGATGAACTTGGGCTGCGCCACAGGGC ACCCCAGTTTCGTGATGTCCTGCTCCTTCACCAACCAGGTCATTGCTCAGCTTGAGCTGTGGAATGAGAGGAACTCTGGC AAGTACAAGAAGGAGGTTTACGTTTTGCCCAAGCATCTTGATGAGAAGGTGGCTGCACTTCACCTTGGCAAGCTTGGAGC TAGGCTCACCAAGCTCAGCAAGGATCAAGCTGATTACATCAGTGTGCCTGTTGAGGGCCCATACAAGCCTCTTCACTACA GGTACTGA
Protein sequence (LotjaGi4g1v0371500.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MALLVEKTTSGREYKVKDLSQADFGRLELELAEVEMPGLMACRTEFGPAQPFKGARITGSLHMTIQTAVLIETLTALGAE VRWCSCNIFSTQDHAAAAIARDSAAVFAWKGETLQEYWWCTERALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEVFEKT GELPDPTSTDNPEFQIVLTIIRDGLKTDSHRYRKMKERLVGVSEETTTGVKRLYQMQANGTLLFPAINVNDSVTKSKFDN LYGCRHSLPDGLMRATDIMIAGKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVVSEADI FVTTTDMLGLESYPGVKRITIKPQTDRFVFPETNTGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWNERNSG KYKKEVYVLPKHLDEKVAALHLGKLGARLTKLSKDQADYISVPVEGPYKPLHYRY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 326 | 326 | 2.2E-278 | ||
| PANTHER | 1 | 326 | 326 | 2.2E-278 | – | |
| PIRSF | 2 | 331 | 330 | 7.2E-124 | ||
| Gene3D | 13 | 241 | 229 | 5.7E-170 | ||
| SMART | 13 | 454 | 442 | 2.4E-273 | ||
| Pfam | 13 | 454 | 442 | 1.8E-144 | ||
| SUPERFAMILY | 13 | 242 | 230 | 3.66E-115 | – | |
| CDD | 23 | 443 | 421 | 0.0 | ||
| ProSitePatterns | 85 | 99 | 15 | - | ||
| Pfam | 240 | 326 | 87 | 2.2E-45 | ||
| SUPERFAMILY | 240 | 373 | 134 | 5.15E-55 | ||
| SMART | 240 | 373 | 134 | 1.9E-64 | ||
| Gene3D | 242 | 325 | 84 | 5.7E-170 | – | |
| ProSitePatterns | 262 | 279 | 18 | - | ||
| PANTHER | 326 | 455 | 130 | 2.2E-278 | ||
| PANTHER | 326 | 455 | 130 | 2.2E-278 | – | |
| PIRSF | 326 | 455 | 130 | 6.1E-36 | ||
| Gene3D | 327 | 374 | 48 | 3.6E-57 | – | |
| SUPERFAMILY | 350 | 455 | 106 | 6.29E-28 | – | |
| Gene3D | 375 | 455 | 81 | 3.6E-57 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Adenosylhomocysteinase activity | Catalysis of the reaction: S-adenosyl-L-homocysteine + H2O = adenosine + L-homocysteine. |
Expression pattern of LotjaGi4g1v0371500.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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