Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0136100 |
| Transcript ID | LotjaGi5g1v0136100.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Calcium-transporting ATPase; TAIR: AT2G41560.1 autoinhibited Ca(2+)-ATPase, isoform 4; Swiss-Prot: sp|O22218|ACA4_ARATH Calcium-transporting ATPase 4, plasma membrane-type; TrEMBL-Plants: tr|Q93YX7|Q93YX7_MEDTR Calcium-transporting ATPase; Found in the gene: LotjaGi5g1v0136100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:32256222..32260283) extracted from Lotus japonicus Gifu genome v1.2.
GTTGCGTTAGAACTGATCATTTTCTATTGATGTGTGTTCTTTTTCTTATGTAGCTGTTGGTGCAACTGAATACAAGCTGT CAGAAAAGACGAGAGAAGCTGGTTTTGGTATTGAACCAGATGATATTGCTTCAATTGTCCGAGGCCATGATCACAAGAAC TTAAGAAAAGTTGGTAAAGTTGAAGGGATAGCAAGTAAACTCTCAGTCTCAATTGATGAAGGTGTCAGTCAACACAGTAT AAATAGCAGGCAAGAGGTCTATGGAGTCAACCGTTATACTGAGAAACCTTCTAAAAACTTCCTGATGTTTGTTTGGGATG CACTGCATGATGTAACGCTAATCATTCTCATCGTTTGTGCTATAGTTTCTATAGGTATAGGGCTTCCCACTGAAGGGTGG CCAAAGGGTGTTTACGACGGCGTGGGAATCATACTCAGTATATTCCTGGTAGTCTTTGTTACTGCTATCAGTGACTACAA GCAATCCCTGCAGTTCCAGGATTTGGACAAAGAGAAGAAAAAGATCTTTGTTCACGTCACTAGGGATGGGAAAAGGCAGA AGATCTCAATTTTTGATTTGGTAGTGGGAGATATTGTTCATTTGTCAACTGGTGATCAAGTTCCAGCTGATGGGATTTTT ATATCAGGATATTCTCTGCTAATTGATGAATCAAGTTTGTCCGGTGAGAGTGAACCAGCAAATATAGAAGCAGAAAGACC TTTTCTTCTTTCAGGAACCAAAGTACAAGATGGACAGGGGAAGATGATAGTTACAACTGTTGGCATGAGGACTGAGTGGG GGAAGTTGATGGAAACTTTAAGTGAGGGAGGGGAGGATGAGACTCCACTGCAGGTGAAATTGAACGGAGTTGCTACCGTT ATTGGAAAAATTGGTTTGACTTTTTCTGTGCTAACATTTGTGGTGTTGACAATAAGGTTTGTGGTTGAAAAAGCACTTTA TGGTGAGTTTAGTAATTGGTCTTCTACTGATGCACTGAAGCTACTGGACTATTTTGCTATTGCTGTAACCATCCTTGTTG TTGCAATTCCTGAAGGATTACCATTAGCTGTGACACTTAGTCTTGCTTTTTCTATGAAAAAGTTAATGAATGACAGGGCA CTTGTGAGACATCTCTCTGCATGTGAGACTATGGGTTCAGCTAATTGCATTTGCACAGATAAAACAGGGACATTGACTAC AAACCATATGGTGGTTGATAAAATTTGGATTTGCGAAAAGACCACAGAGATTAAAGGTAATGAGAGTGTGGAGAAACTTA AATCAGAGATATCTGAAGAAGTTATAAGCATCTTTTTACAGGCTATATTTCAAAATACTTCGTCAGAAGTAGTCAATGAC AAAGAAGGAAAGAAGGCTATTTTGGGAACACCAACAGAATCCGCATTATTAGAATTTGGCTTGCTTTCAGGTGGTGATTT TGATGCCCAGCGTAGAGACTATAAGATACTTAAGGTTGAGCCTTTCAATTCATCCCGGAAGAAGATGTCTGTGCTTGTGG GTCTTCCTGATGGAGGGGTCCGAGCTTTCTGCAAAGGTGCATCAGAAATAGTATTAAAATTGTGTGACAAAATTATTGAT TCTAATGGGACAGCTGTTGATCTTCCTGAAGAGAAGGCAAAGAATGTCAATGATGTTATAAATGGCTTTGCCTGTGAAGC TTTGAGAACTCTCTGTTTGGCTGTCAAAGATATAAATGAGACTGAAGGAGAAACCAATATCCCTGATGATGGCTATACTC TGATAGCCATAGTGGGAATCAAGGACCCTGTGCGCCCTGGAGTTAAGGAAGCTGTTCAAACTTGTCAAAAAGCTGGAATA ACTGTCCGCATGGTCACTGGTGATAACATAAATACAGCTAGGGCGATAGCTAAAGAATGTGGTATACTTACTGAGGGTGG TGTAGCCATAGAAGGACCTGCATTTCGTGACTTGTCTCCAGAGCAAATGAAGGATATCATACCAAGAATTCAGGTAGTGT TCTCATTGTAACTTCTGTGGCTTTTAATTCTCTTTTTAGATGGTGTCTTTCTTATGTGCTTAATATGGCTATAGGTAATG GCACGATCTTTACCTCTTGACAAGCATACCTTAGTAACCAATTTGAGGAATATGATTGGTGATGTTGTAGCTGTTACTGG TGATGGAACCAATGATGCTCCTGCGCTGCATGAGTCAGACATTGGGCTTGCCATGGGCATAGCTGGAACTGAGGTTTGTG CCTATTATTATTCATTGGCTTAATATGGTGAATTGATGGTATCACATGTAGCAGTCCAATGTACTGTGCTTGTATAGTTG CTGTGCATTTTGATTAAGAAACAAAAGTGTTATCTCCAGTTCTTGTTATATTATCTGCTGCTAAGTTGTTAACAGTTTTC CTTTCCCTCTTGTCCCTCCTCTCCTCTTCTTTCTGCACTGAAAAGGAGCTATCTTAAATAAATAGACAAGACAAATTGTT AAACAAGTCTTTTGTTATGTCTTACCCGTGGTCTATTTTATGTGAATGCCTGGTTGATTATATTCTAATACTTTTTTTTT CTTTTAATTATACCTTTTACACAGGTTGCCAAAGAAAATGCTGATGTCATTATAATGGACGATAACTTCACTACTATTGT CAATGTGGCGAAATGGGGACGGGCCATATATATAAACATTCAAAAGTTTGTGCAGTTTCAACTAACAGTAAATGTTGTTG CTCTGGTTACTAACTTTGTTTCTGCATGCATTACTGGTATGTTGATTTATAGAAGAATTTTTTTCCATTGAATTGCTGAA TCTGTTTTCAAGGAACTTAGATTAAGTTTTCTTCTTTATTTTCAGGATCTGCTCCACTCACAGCTGTTCAGTTGCTCTGG GTCAACTTGATCATGGACACTTTGGGTGCACTGGCCCTGGCTACTGAACCTCCTAATGATGGACTTATGGAAAGACTCCC AGTTGGAAGGAGAGCCAGTTTTATCACCAAACCAATGTGGAGGAATATCTTTGGCCAAAGTATATATCAACTAATCGTCC TCGGGGTTCTCAATTTTGACGGGAAGAGGCTACTGGGCCTTACTGGCTCAGATGCAACTGCAGTGCTGAACACTGTGATA TTCAACACCTTTGTATTTTGCCAGGTGAAGTATCGCATATGCCCTCTCTAAAACACAAACTTTTATTTATGGCACAGAAG CTAATTGGTGGTTAAACTTGTCAAAGAAACTTGTTTTTTATCCACACAGTTTATACAAATCTGGAAAAAATTGAACACAA TTGAAAGATTTTCTGGATCAAAATTCATTTGAGCTTATGAATTAATCTATAGTTTGTATATAGGCATTATTATTACTATA CGTGATCTTTCTTTCTGAAAATAATTTATGCGACAGTACTTACTGTGAATAAAGGAACCTCCTTTTTGTACTGATGGATT ATAAATTAAAAAGTGTTGAAGTCTCACATTGACTAGAGATATGATTAAATAAGTCTTTATATAGGGAAAATGAGAGGGTG AGCCGGCACAACGGTGAGGTTTCTGCCATGTGACTTTGCGGTCACAAGGATTGAGCAATCCTCCCTAAGCTAGCTTTAGG GGGTTGAGTTGGGCCTAACCCAAATTCTAAGAAAATGTTGTAACATGTTTACAGTTCTCACCTTATTGGATCTATGATCC TTCAACATGCCTTAAAAACTACATTAAAGCATTCAAGATGTTAACTGACCTTGTTCCATTGCAACTCTTTTGACAGGTGT TTAATGAGATAAACAGCAGAGAAATTGAGAAGATAAACATATTCAGAGGCATGTTTGACAGCGGGATATTCTTTACGGTA ATTTTCTCTACAGTGGCATTTCAAGCAATCATAGTTGAGTTTCTGGGTACATTTGCCAACACTGTGCCCCTAAACTGGCA ACTCTGGTTGCTCAGCGTGTTAATTGGAGCAGTTAGCATGCCTATTTCTGCTATCCTCAAGTGCATCCCAGTTGAAAGAG ATACTACTACAAAGCACCATGATGGTTACGAAGCACTGCCTTCTGGTCCTGAGCTTGCATAA
CDS sequence (LotjaGi5g1v0136100.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTTGTTTGGGATGCACTGCATGATGTAACGCTAATCATTCTCATCGTTTGTGCTATAGTTTCTATAGGTATAGGGCT TCCCACTGAAGGGTGGCCAAAGGGTGTTTACGACGGCGTGGGAATCATACTCAGTATATTCCTGGTAGTCTTTGTTACTG CTATCAGTGACTACAAGCAATCCCTGCAGTTCCAGGATTTGGACAAAGAGAAGAAAAAGATCTTTGTTCACGTCACTAGG GATGGGAAAAGGCAGAAGATCTCAATTTTTGATTTGGTAGTGGGAGATATTGTTCATTTGTCAACTGGTGATCAAGTTCC AGCTGATGGGATTTTTATATCAGGATATTCTCTGCTAATTGATGAATCAAGTTTGTCCGGTGAGAGTGAACCAGCAAATA TAGAAGCAGAAAGACCTTTTCTTCTTTCAGGAACCAAAGTACAAGATGGACAGGGGAAGATGATAGTTACAACTGTTGGC ATGAGGACTGAGTGGGGGAAGTTGATGGAAACTTTAAGTGAGGGAGGGGAGGATGAGACTCCACTGCAGGTGAAATTGAA CGGAGTTGCTACCGTTATTGGAAAAATTGGTTTGACTTTTTCTGTGCTAACATTTGTGGTGTTGACAATAAGGTTTGTGG TTGAAAAAGCACTTTATGGTGAGTTTAGTAATTGGTCTTCTACTGATGCACTGAAGCTACTGGACTATTTTGCTATTGCT GTAACCATCCTTGTTGTTGCAATTCCTGAAGGATTACCATTAGCTGTGACACTTAGTCTTGCTTTTTCTATGAAAAAGTT AATGAATGACAGGGCACTTGTGAGACATCTCTCTGCATGTGAGACTATGGGTTCAGCTAATTGCATTTGCACAGATAAAA CAGGGACATTGACTACAAACCATATGGTGGTTGATAAAATTTGGATTTGCGAAAAGACCACAGAGATTAAAGGTAATGAG AGTGTGGAGAAACTTAAATCAGAGATATCTGAAGAAGTTATAAGCATCTTTTTACAGGCTATATTTCAAAATACTTCGTC AGAAGTAGTCAATGACAAAGAAGGAAAGAAGGCTATTTTGGGAACACCAACAGAATCCGCATTATTAGAATTTGGCTTGC TTTCAGGTGGTGATTTTGATGCCCAGCGTAGAGACTATAAGATACTTAAGGTTGAGCCTTTCAATTCATCCCGGAAGAAG ATGTCTGTGCTTGTGGGTCTTCCTGATGGAGGGGTCCGAGCTTTCTGCAAAGGTGCATCAGAAATAGTATTAAAATTGTG TGACAAAATTATTGATTCTAATGGGACAGCTGTTGATCTTCCTGAAGAGAAGGCAAAGAATGTCAATGATGTTATAAATG GCTTTGCCTGTGAAGCTTTGAGAACTCTCTGTTTGGCTGTCAAAGATATAAATGAGACTGAAGGAGAAACCAATATCCCT GATGATGGCTATACTCTGATAGCCATAGTGGGAATCAAGGACCCTGTGCGCCCTGGAGTTAAGGAAGCTGTTCAAACTTG TCAAAAAGCTGGAATAACTGTCCGCATGGTCACTGGTGATAACATAAATACAGCTAGGGCGATAGCTAAAGAATGTGGTA TACTTACTGAGGGTGGTGTAGCCATAGAAGGACCTGCATTTCGTGACTTGTCTCCAGAGCAAATGAAGGATATCATACCA AGAATTCAGGTAATGGCACGATCTTTACCTCTTGACAAGCATACCTTAGTAACCAATTTGAGGAATATGATTGGTGATGT TGTAGCTGTTACTGGTGATGGAACCAATGATGCTCCTGCGCTGCATGAGTCAGACATTGGGCTTGCCATGGGCATAGCTG GAACTGAGGTTGCCAAAGAAAATGCTGATGTCATTATAATGGACGATAACTTCACTACTATTGTCAATGTGGCGAAATGG GGACGGGCCATATATATAAACATTCAAAAGTTTGTGCAGTTTCAACTAACAGTAAATGTTGTTGCTCTGGTTACTAACTT TGTTTCTGCATGCATTACTGGATCTGCTCCACTCACAGCTGTTCAGTTGCTCTGGGTCAACTTGATCATGGACACTTTGG GTGCACTGGCCCTGGCTACTGAACCTCCTAATGATGGACTTATGGAAAGACTCCCAGTTGGAAGGAGAGCCAGTTTTATC ACCAAACCAATGTGGAGGAATATCTTTGGCCAAAGTATATATCAACTAATCGTCCTCGGGGTTCTCAATTTTGACGGGAA GAGGCTACTGGGCCTTACTGGCTCAGATGCAACTGCAGTGCTGAACACTGTGATATTCAACACCTTTGTATTTTGCCAGG TGTTTAATGAGATAAACAGCAGAGAAATTGAGAAGATAAACATATTCAGAGGCATGTTTGACAGCGGGATATTCTTTACG GTAATTTTCTCTACAGTGGCATTTCAAGCAATCATAGTTGAGTTTCTGGGTACATTTGCCAACACTGTGCCCCTAAACTG GCAACTCTGGTTGCTCAGCGTGTTAATTGGAGCAGTTAGCATGCCTATTTCTGCTATCCTCAAGTGCATCCCAGTTGAAA GAGATACTACTACAAAGCACCATGATGGTTACGAAGCACTGCCTTCTGGTCCTGAGCTTGCATAA
Protein sequence (LotjaGi5g1v0136100.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MFVWDALHDVTLIILIVCAIVSIGIGLPTEGWPKGVYDGVGIILSIFLVVFVTAISDYKQSLQFQDLDKEKKKIFVHVTR DGKRQKISIFDLVVGDIVHLSTGDQVPADGIFISGYSLLIDESSLSGESEPANIEAERPFLLSGTKVQDGQGKMIVTTVG MRTEWGKLMETLSEGGEDETPLQVKLNGVATVIGKIGLTFSVLTFVVLTIRFVVEKALYGEFSNWSSTDALKLLDYFAIA VTILVVAIPEGLPLAVTLSLAFSMKKLMNDRALVRHLSACETMGSANCICTDKTGTLTTNHMVVDKIWICEKTTEIKGNE SVEKLKSEISEEVISIFLQAIFQNTSSEVVNDKEGKKAILGTPTESALLEFGLLSGGDFDAQRRDYKILKVEPFNSSRKK MSVLVGLPDGGVRAFCKGASEIVLKLCDKIIDSNGTAVDLPEEKAKNVNDVINGFACEALRTLCLAVKDINETEGETNIP DDGYTLIAIVGIKDPVRPGVKEAVQTCQKAGITVRMVTGDNINTARAIAKECGILTEGGVAIEGPAFRDLSPEQMKDIIP RIQVMARSLPLDKHTLVTNLRNMIGDVVAVTGDGTNDAPALHESDIGLAMGIAGTEVAKENADVIIMDDNFTTIVNVAKW GRAIYINIQKFVQFQLTVNVVALVTNFVSACITGSAPLTAVQLLWVNLIMDTLGALALATEPPNDGLMERLPVGRRASFI TKPMWRNIFGQSIYQLIVLGVLNFDGKRLLGLTGSDATAVLNTVIFNTFVFCQVFNEINSREIEKINIFRGMFDSGIFFT VIFSTVAFQAIIVEFLGTFANTVPLNWQLWLLSVLIGAVSMPISAILKCIPVERDTTTKHHDGYEALPSGPELA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 11 | 11 | - | – | |
| PANTHER | 1 | 873 | 873 | 0.0 | – | |
| PANTHER | 1 | 873 | 873 | 0.0 | – | |
| TIGRFAM | 2 | 853 | 852 | 0.0 | ||
| CDD | 2 | 724 | 723 | 0.0 | – | |
| Gene3D | 3 | 175 | 173 | 3.1E-199 | – | |
| SUPERFAMILY | 3 | 852 | 850 | 3.14E-104 | ||
| Gene3D | 5 | 848 | 844 | 3.1E-199 | – | |
| TMHMM | 7 | 29 | 23 | - | – | |
| Phobius | 12 | 29 | 18 | - | – | |
| Phobius | 30 | 34 | 5 | - | – | |
| Phobius | 35 | 55 | 21 | - | – | |
| TMHMM | 39 | 56 | 18 | - | – | |
| TIGRFAM | 42 | 326 | 285 | 1.6E-37 | ||
| Phobius | 56 | 191 | 136 | - | – | |
| SUPERFAMILY | 75 | 171 | 97 | 2.75E-26 | ||
| Pfam | 76 | 268 | 193 | 2.6E-42 | – | |
| PRINTS | 121 | 135 | 15 | 3.4E-33 | – | |
| Phobius | 192 | 214 | 23 | - | – | |
| TMHMM | 192 | 214 | 23 | - | – | |
| Phobius | 215 | 233 | 19 | - | – | |
| Phobius | 234 | 262 | 29 | - | – | |
| TMHMM | 236 | 258 | 23 | - | – | |
| Phobius | 263 | 723 | 461 | - | – | |
| SFLD | 272 | 644 | 373 | 0.0 | – | |
| SFLD | 272 | 644 | 373 | 0.0 | – | |
| Gene3D | 287 | 636 | 350 | 3.1E-199 | ||
| SUPERFAMILY | 289 | 696 | 408 | 4.06E-54 | ||
| PRINTS | 290 | 304 | 15 | 3.4E-33 | – | |
| ProSitePatterns | 292 | 298 | 7 | - | ||
| SUPERFAMILY | 296 | 500 | 205 | 3.49E-49 | ||
| Gene3D | 300 | 495 | 196 | 3.1E-199 | ||
| Pfam | 344 | 430 | 87 | 1.6E-19 | – | |
| PRINTS | 448 | 466 | 19 | 5.9E-12 | ||
| PRINTS | 488 | 499 | 12 | 3.4E-33 | – | |
| PRINTS | 510 | 520 | 11 | 3.4E-33 | – | |
| TIGRFAM | 556 | 679 | 124 | 4.7E-28 | ||
| PRINTS | 591 | 610 | 20 | 3.4E-33 | – | |
| PRINTS | 591 | 607 | 17 | 5.9E-12 | ||
| PRINTS | 615 | 627 | 13 | 3.4E-33 | – | |
| PRINTS | 623 | 648 | 26 | 5.9E-12 | ||
| TMHMM | 658 | 680 | 23 | - | – | |
| Pfam | 676 | 849 | 174 | 5.8E-41 | ||
| Phobius | 724 | 744 | 21 | - | – | |
| Phobius | 745 | 755 | 11 | - | – | |
| TMHMM | 749 | 771 | 23 | - | – | |
| Phobius | 756 | 775 | 20 | - | – | |
| Phobius | 776 | 795 | 20 | - | – | |
| TMHMM | 791 | 813 | 23 | - | – | |
| Phobius | 796 | 817 | 22 | - | – | |
| Phobius | 818 | 828 | 11 | - | – | |
| TMHMM | 828 | 850 | 23 | - | – | |
| Phobius | 829 | 850 | 22 | - | – | |
| Phobius | 851 | 874 | 24 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleotide binding | Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose. | ||
| Molecular function | Calcium-transporting ATPase activity | Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Ca2+(cis) = ADP + phosphate + Ca2+(trans). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Biological process | Calcium ion transmembrane transport | A process in which a calcium ion is transported from one side of a membrane to the other by means of some agent such as a transporter or pore. |
Expression pattern of LotjaGi5g1v0136100.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…