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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0147300 |
| Transcript ID | LotjaGi5g1v0147300.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Carboxyl-terminal-processing protease; TAIR: AT3G57680.1 Peptidase S41 family protein; Swiss-Prot: sp|F4J3G5|CTPA3_ARATH Carboxyl-terminal-processing peptidase 3, chloroplastic; TrEMBL-Plants: tr|A0A0L9TVD7|A0A0L9TVD7_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0147300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:37621848..37629129) extracted from Lotus japonicus Gifu genome v1.2.
ATGTGCTAAAATAAGGAGTTGATTTTTCTTGTTCTAAGATACGTACACGCGAGCATACGGAATCTGAGAATCAAGCACAG CCACAACCGAAGAAGATTCAGGTGGAGTCCCACACCCACGTTTCAAGTTCAACAACACACATTATATATTCTTATGTTGA ATATGATAAACATAACATTACATTTAGCGGTCACCAACACGCAACAACCGTCACTAGTCACTACCACTAATAAGTAATAA GCTTTTCTCTCCGATGGTACCATTCAGCAGCAAAAACTAACTAAAGAAAAAAGGAAAATGAAGAATCTTTGTCACAATTT GGACATTAAAGCTGCAATTCCAGGTAAAGTGGCGAAACCCATTTCGGTAGCAGCGTTTCCTCGTAGGTTGTGGTTCCCGA CATGGACACGGCAGAGGAAGGTGTCGGTGTCGGTGTCGGTGTCGTCGATTGAGGAAGAGAAGAAGGTGAAGATGCAGTGC CGTGAGTGGATTGAAAGTGCAGCCAAAAGTGCTTTTGGATTTGGCGTTTCAGCTTCTATCTTCTTCTCTGTTTTTTGCCA CGCGCCGCCGCAGGCTCTCGCTCAGTCACTCACCGTCGCTTTTCCCGTTTCACGGGCACCAGAGGTCATTTATTTTTCTA TCTTTCTTTTGGCTTTATTTTTCTTCAGTAAATAAATATCCATATTAAAATCGTTTACGTAATAAAAGTAACAAATGATG AAATAATTGTGTTAATGGTAAAATTAGTCCATAAGTTTTTAAGCGAGTTTGATTTTACCACTAAACGTCAATTTTTTAGA GGAACTAAAATTAAATTAAATTCGCTTACAAAGTCATAGACTAATCTAACGATTAATTCAATAATTTTCATCCAAAACAG AAGATGAAATAATTTATGTGTTTCCATTTCAGAAAAAAGTGTTTATTTTTGTTAAAATTATTAGTAACTTTTTTAATAAG TCATAAACATTTTTAATTAATTATTTCTATATAATCCTATTTTATTAATTAAGTAAAATAAAAGTAAAAATAATGTTTTT TGTTAAAATTATTAGTAATTCTTGGATGACCTTACTGTCTCTATGCACAACTAGTCAGAAACAGGATATATTAAAATAAT GATGAAAAAAACAATAAAACCCTTCCTGAAGTCTTTTTAGCTTCATCCTTAGTTATTGATTTGGTTGAGGCTATATGCAA TGTGCTCACACATGAATTATTCCATTTTTCTTTGTAATTCACAGGGAAGTAAAATAGTTCAATTCTACTTTTGTTGAAAT GTTGGCAAATAACGACTATCCTCTTGAATTTTGCTTGCACCTCAGTCATGATGCTGAAAATGCAAATATGAATATTCAAC TCTGAGGCAATTGTAGTGAGCTTTAAGCAAATTGACTTTGATGATACTAGAGTTTTGTTTAACCTTAACATGAACCATGC TGAGTGAAGAAAAGGTTATTTGTTAGGTAAATGCAGTTCAAAGAACTCTTGTGGAAGCATGGGGTTTGATTCGAGAAACA TTTGTTGACCCTACATTTAATCATCAAGGTATTTCTGGTTTCTTACCATATTCTACTTTCAGGCTTGAAGTACTGACTTT GAGAACAGAATACATTTACACTTGTCTATTGGGGTTCTTTCTTATTTTTAAAAATAAAATAGGTGCTGCCAACTTGATTA TTTAATTAAGTTAATTTCTCAGCTACTTATGAACCTTTGAAACAAGATTTTAGGGCTGAACGATTTTTCTTGATAAAAAG TTCCAATACGTAACATTTGCATGGATAATAAAATGTATAATGTTTGCATGGAAGGATCGACAATTAAATGCCCATGTTTA TTTGTAGATTGGGATATGAAGTTGCAGCAAACAATGGTGGAAATGTTTCCCCTGAACTCAGCTGATGCAGCCTACACAAA AGTCAGTGGAATGGTTTCTACCCTTGGAGATCCGTTCACTCGAATTATCAGTCCAAAGGTCTTGCACTGCAACTAAAATT TGCTTTTCTGGAATCTCAATCTTGTTTTCTTGGTCAATAGAAAAAGCAGTAACTAGAGATATGATCACATATCCTTGTCT ATGTTACCTCTTCTGGTGTGTAGCTTCCATATGAAATGGACTATTCTTATAAAACTTTTTAAGATAACAAGTCTATTTTT AAAATCGGACTTTTTTTTATAATTAATTTTAACAGTTATCATACTAACAGGAATACCAAGGATTTAGAATTGGAAGTGAT GGGAACTTACAAGGAGTAGGCCTCTTCATAAATGTTGAACCAAGAACGGGACATTTGGTTAGTGACTTGTGAAAAACACT AAATTTTCAGCAATCAAATACATTCAAGTTTTATGGTGATTGTTCTCAGGTCATTTGATTATGTAATTCAGCTCTGCCTG GTTTCATTTTCTCATTTAAATTTCTCTGCCACTACAGAACTAGATATTGATTATGACAATGCACCTCTTTCTCATTTGAA TTATGATATTCTGAAAAAAATGAATTTGCAGGTTGTTTTGTCATGTATAGAAGGCAGTCCGGCTGCGCGTGCTGGTATAC ATCAAGGAGATGAATTGGTTGAGATAAATGGTACTGACCAAGTATCTGAATCTTTTCTCATTTGTGAAGCTATTTAATTA TAGTTTTCTAATTATTGAATACTACTACTGAATGTATCACATTAATTGGACTCTCTCTCCCTTTCAATTCTCCAATTCAG TAGGTTAAGGTTAATCTTGAGAAGTTAATATAAATTGAGAATGGACGTGAGAGAGTTATTTAGTTCTTATAATAAGGACG GGGTTGTATTTTAGATCTTAAGTGAAATGAGTAATTTTACTTGGAAATATTTTGATTTTGCAGGGGAGAGTGTTGATGGC ATTGATAGTGAGGCTGCAGCACAGAGGCTTCGAGGGAATGCTGGAACAACAGTAACAGTAAAGGTTCATTGTGAAATCAT CATACTTCCATTTTTTTCGTATAAGCTTTATTTGAACTAGAGATATGCCTCTGAAAAGGTTTCATAGATACCTTTGAAAC GTTGATATTTTTGTTGAAAATGGTTCAATTTTCAGCCTTTATTTATTTTGCTTTTTACTGGGGTTAAGGATAATTTCAAT CTTGATTCTTTATAAAAATGGGCACTGATGTATGAGAGAGGGTGCTTTAGAATTTTTCTGCAGTTGTTGAGAAATGAGAA GTCTCACGTTGACTGGCCATATAAGTGTTTATAAAGGGTAGAGGAACCCTCACCTCTAAGCTAGCTTTTGGGGTAGAGTT AGGCCTCCCTAATTCTAATAGTAGCTAAAATCTTTCATTCCTTAGTGGCTTTCTTGAGAATTTGAGCATTGTTCTAGAAA CTAACTTTTAAAGCTTTTCTTCTCCAGGTCAAAAACTCAGGGAGAAGCTCTTACATCCGGGAGGTAATGTTGACTTATTT CTTCTACTTATGTTCTTATGATTCATGAAATGTCAACTTATTTCTTCTACACTTCTTATGTTGTTACTTTATGCAAAAGC ATTTATGTGACAAACTTTTCCCCTTTTATTTTGATTTTAAATTCACAAAACTAAAATATACCTGAAGGTCAAACTTCCAA GGGAGTGTATCAAGCTCTCTCCAATATCCAGTGCCATCATCCCTCATAGATCCCCCGAAGGGCAGGCGATAAAAACTGGC TATGTGAAACTGTCAACCTTCTCTCAGGTGAGCAAAACAATCAGCTATAAAAAAAAATTGCAATCTGTACATAGTTAAAC TTGAAAAGGTAAAATATATCAGGGTGTTGCTCCAGTACTCATTGAAAATGGGAGATATAGTACCTTTAGTTCATTTTTTA GCATCCAAAGGACAAGATTGTAGATTAAAAAAAATTACTTATGGAGAAAACATGATTAAAGGTATGGAACCCTTCACTTT TAGAGGGGTACCAAAGAAATTGTCAATATATAATTCAACTACCATTAATTGCTTGGACCTTAATTATTTTAATGTTTATT ATATGACAGATCAACTTATGTTTCATTTTCCTTAAGGAAAGATTAGATTCAGGATTCGGAAAATCGGTCTTCCGATTCAC AATTCAAATATTCAGTCGCCATGTTACAGTATGAACTTTTCCTGTTCCTTCTTGACAGACTGCTGCTGAAGACATGGAGA ATGCTATTCAGGACATGAAGAATCAAGGAGTACACTCATACATACTAGATCTACGGAACAATCCTGTAATTTACTTCTAT GATGAAAAGTTTCAATGTTATCATCTCTGAAACAATTGAACTTAGAAGTGTTTTCCTCCTTTTCTTTCTGTAATTTCATT GCAGGGTGGTTTGGTAAAAGCTGGTCTTGATGTTGCCCAGATGTGGTTAGATGGAGATGAAACTCTAGTGAATACAATCG ATAGAAGCGGGGATGTTTTACCAATTAACATGGTCAATGGACATGCTATAACACATGATCCACTTGTGGTGATAGTGAGT ACTAACTTTCGGCATAGACTATGCATTTTAATAATAAAATATTTTAATGAGTCAAAAAATGCTAACTTCAGTATTTGATG TTGCAATTGGTACCCAAATAAATTCCTTAAATGTATTCCTGTATGACCATGCTCCTATGTTAGCAAAGGTTCATTATCAA CAACTCACCTTTATGCCTAGAATCCTTTACCATTCAACTATATAGTAAATATGAGTCTGTCAAATCTTGGGTTTCCATAA GCATTAAAATTACCTTTTGTAGAAATTACTAGTTCAATGAACTACATTTTTTCAATCCTTAACAGGTCAATGAGGGAAGT GCAAGTGCCAGCGAGATTTTAGCTGGGGCATTACATGATAATGGTAGAGCTATTCTTGTAGGGCACAAAACATTTGGCAA AGGAAAGATTCAGGTACCATTCCTTTTTTTTGTTATATGATCACACGGATGTTTTAAGTATTTAAATCTTGTTTTTAAAC TGCATTTCTAAAAGGCAAATCATGAAACGAAGAGGTATTGTAATGTATATATGAGGTCGATAATGTACTCCAAGTCTACT GTAAGTGTGTTTTCCATTTTAAAGGCATGTACCATGCATACTTTCACTACAGGGGAAAAAATTTAACACATTATACAAAA TCAACAGTACTTAATTGGAAGAGAGTCAAGAGACAATATAAAAGTTGAGGGGGAAACAGAGAATTTTTTCTCATCGGGGG TGATCGCCCATTTGTAATGTATGTAGTTCCTTTCCCGTGCATATACATATATGATCTGAAATAATTCATAGATCCCGCTT GGATACGGACTTAAAAGCACTTATTGCAGGTTACCTACTAAAAAAAGCATGGGATAATCTCCAATAGGTGTTCTTAGTCT GCATCCAAACGGGTTCATAATCATAAACTACTATGGAGTTCTGTCTTCATAATGTTCTATTTTGATCTATGTTTTCCCAT GAAAGTTAATTTCAAAGTAAACAAACTGTAAACTTTGAGTAATTCTTACAGAAGTTGTTTATAAGCACAACCAATCAAAA CTCTCGATAATATCAAAACAACTTGAACAAAAAAAATTCTGTCCTTTTTATCTGTATTATTTTGATATATCTTGAGTTTT TTATTGGTAGTCCCTATATGCACTGTACTCATGCAAGAATTACTCAAATTTAGTCCCAAGGCTTGTTCCTATTTTTGATA TCTTGGTTGATTGCAGAGTGTGACTCAGCTTCATGATGGGTCAGCCCTGTTTGTTACAGTAGCAAAATATCTCTCACCAG CCAAACATGACATAGATAAGGTTGGGATAACCCCAGACGTGCAGTGCACCACAGAGATGCTGAATTCACCCAAAGATAAG GAGCTTTCAACCAAAGATCAAAGGAGCTCGGTCTCGTCTTTAGAAGCAGATTCATGCATCATGGTAGCTGAACACGAGTT GGATATGAAGGATTCCAAGGGAAGTGCTTCTTGAACATTCCCTTGTTTTCATGATCCCATTTTCTTTTCAGCGTTTAAAG TTGAAAGGACAGTTAGCTGAGTCAGCCTGTATATCACTTTGTACAATGTGACATTGTAATTACTAGTCATGGTAAGTATA CAAAATAGAGAAACCGGTTGTATATATCATTCAATAGAATCATACAAAATTCACTTCCTAGTTGAAGCATAATAAATTAT CCAATTATTGTACTTTCTACATAATTGATCTTCCTCAGGGCTGGACGAGATGATCTTTGATTAAGCTGAGTGGTGCAGTG GCAATGCACAATGGAGCACAGCGGCAAAATGCACTCTGACACTCAAGTTAGGTCAAGATTAGAAAGAGAATCTCAAAGTC AAGGAAGAACAATATGAATTGTCCAAATAACTTACAGTGCAAGCAAACCTCATATACCAGTCTTCTTGTTTGTTGAATTG CACGAGAAGTAATCGATAGCCAGTCTATCATAACTGAATGGCCAGGTGGCGTAACATTCTTAACTCTGGTTGAGTTAGTT TGACCATGGTTCTAATGGTTCAACTCTTATAGTTAAGTCCACTGGTTAGAATGATGGAAGCTTCGTCTTCCTTGGTATGA ACGCGTGAGGCCGTGGAATTCCTTCTGGTCGTTTGGGCTAGCATTGATGGCATTTTGGCCATGTGGCGGCCCAGAACAAG AATATTTTAAGACAAAGTTGGACTATAGCTCAAAGCAGTTCAACGGAGAAGAAAAACCACTCTTGCAGAATTTAATGAAG TGACACAATAAAATCCTTCAATTAAATGGAAACAACTATTACATATCAGTAGCTGATTACAAACTTCATAATGTTGCTCA TCATATAGGTATTCTTACAAAATGGTAAAACATATATGGTACCATTTTCAACAAACAAGCATAAACATACAAGACAAAGT AGATTATCCCAGCAATTCACTGCAACGTGAATGCCACAAGGGAAGCCAGAACAGAAGAATACAAGAATACCCTAGAAACA GGCAAAGCAAACCCAGCTCCAGCCTCCAACTGCCCAGTGGGAGCAATCCCTGAATCCTGTGCCACAATGTTGGTCACACA AAACAAGCCCACAAGCATTGCTACCATCAAAATTTTAGCAGTGAAGCTACCAAATGGTGTCATTTCCGCAGAGTTGCTGT TTCTATAATGAAATGGCCAAAGAGGACTACTTGTATTGGCTGCCAACTTAATTGTTGAATGATAGAACAGAAAATTGAAC TTATATAGGAGTTAGAAAAACTTGCTCAGGGTCACACCAAAAGGTCATTTTTAAGTTGGTGAAATGGTACATTAAACATT AG
CDS sequence (LotjaGi5g1v0147300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGAATCTTTGTCACAATTTGGACATTAAAGCTGCAATTCCAGGTAAAGTGGCGAAACCCATTTCGGTAGCAGCGTT TCCTCGTAGGTTGTGGTTCCCGACATGGACACGGCAGAGGAAGGTGTCGGTGTCGGTGTCGGTGTCGTCGATTGAGGAAG AGAAGAAGGTGAAGATGCAGTGCCGTGAGTGGATTGAAAGTGCAGCCAAAAGTGCTTTTGGATTTGGCGTTTCAGCTTCT ATCTTCTTCTCTGTTTTTTGCCACGCGCCGCCGCAGGCTCTCGCTCAGTCACTCACCGTCGCTTTTCCCGTTTCACGGGC ACCAGAGGTAAATGCAGTTCAAAGAACTCTTGTGGAAGCATGGGGTTTGATTCGAGAAACATTTGTTGACCCTACATTTA ATCATCAAGATTGGGATATGAAGTTGCAGCAAACAATGGTGGAAATGTTTCCCCTGAACTCAGCTGATGCAGCCTACACA AAAGTCAGTGGAATGGTTTCTACCCTTGGAGATCCGTTCACTCGAATTATCAGTCCAAAGGAATACCAAGGATTTAGAAT TGGAAGTGATGGGAACTTACAAGGAGTAGGCCTCTTCATAAATGTTGAACCAAGAACGGGACATTTGGTTGTTTTGTCAT GTATAGAAGGCAGTCCGGCTGCGCGTGCTGGTATACATCAAGGAGATGAATTGGTTGAGATAAATGGGGAGAGTGTTGAT GGCATTGATAGTGAGGCTGCAGCACAGAGGCTTCGAGGGAATGCTGGAACAACAGTAACAGTAAAGGTCAAAAACTCAGG GAGAAGCTCTTACATCCGGGAGGTCAAACTTCCAAGGGAGTGTATCAAGCTCTCTCCAATATCCAGTGCCATCATCCCTC ATAGATCCCCCGAAGGGCAGGCGATAAAAACTGGCTATGTGAAACTGTCAACCTTCTCTCAGACTGCTGCTGAAGACATG GAGAATGCTATTCAGGACATGAAGAATCAAGGAGTACACTCATACATACTAGATCTACGGAACAATCCTGGTGGTTTGGT AAAAGCTGGTCTTGATGTTGCCCAGATGTGGTTAGATGGAGATGAAACTCTAGTGAATACAATCGATAGAAGCGGGGATG TTTTACCAATTAACATGGTCAATGGACATGCTATAACACATGATCCACTTGTGGTGATAGTCAATGAGGGAAGTGCAAGT GCCAGCGAGATTTTAGCTGGGGCATTACATGATAATGGTAGAGCTATTCTTGTAGGGCACAAAACATTTGGCAAAGGAAA GATTCAGAGTGTGACTCAGCTTCATGATGGGTCAGCCCTGTTTGTTACAGTAGCAAAATATCTCTCACCAGCCAAACATG ACATAGATAAGGTTGGGATAACCCCAGACGTGCAGTGCACCACAGAGATGCTGAATTCACCCAAAGATAAGGAGCTTTCA ACCAAAGATCAAAGGAGCTCGGTCTCGTCTTTAGAAGCAGATTCATGCATCATGGTAGCTGAACACGAGTTGGATATGAA GGATTCCAAGGGAAGTGCTTCTTGA
Protein sequence (LotjaGi5g1v0147300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKNLCHNLDIKAAIPGKVAKPISVAAFPRRLWFPTWTRQRKVSVSVSVSSIEEEKKVKMQCREWIESAAKSAFGFGVSAS IFFSVFCHAPPQALAQSLTVAFPVSRAPEVNAVQRTLVEAWGLIRETFVDPTFNHQDWDMKLQQTMVEMFPLNSADAAYT KVSGMVSTLGDPFTRIISPKEYQGFRIGSDGNLQGVGLFINVEPRTGHLVVLSCIEGSPAARAGIHQGDELVEINGESVD GIDSEAAAQRLRGNAGTTVTVKVKNSGRSSYIREVKLPRECIKLSPISSAIIPHRSPEGQAIKTGYVKLSTFSQTAAEDM ENAIQDMKNQGVHSYILDLRNNPGGLVKAGLDVAQMWLDGDETLVNTIDRSGDVLPINMVNGHAITHDPLVVIVNEGSAS ASEILAGALHDNGRAILVGHKTFGKGKIQSVTQLHDGSALFVTVAKYLSPAKHDIDKVGITPDVQCTTEMLNSPKDKELS TKDQRSSVSSLEADSCIMVAEHELDMKDSKGSAS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 39 | 508 | 470 | 5.0E-243 | – | |
| PANTHER | 39 | 508 | 470 | 5.0E-243 | – | |
| SUPERFAMILY | 114 | 469 | 356 | 1.82E-64 | ||
| Gene3D | 119 | 442 | 324 | 3.4E-112 | – | |
| TIGRFAM | 155 | 473 | 319 | 5.8E-91 | ||
| SUPERFAMILY | 165 | 290 | 126 | 2.23E-20 | ||
| ProSiteProfiles | 189 | 266 | 78 | 11.541 | ||
| SMART | 194 | 267 | 74 | 8.0E-15 | ||
| Gene3D | 194 | 284 | 91 | 3.4E-112 | ||
| CDD | 195 | 280 | 86 | 1.53568E-22 | – | |
| Pfam | 211 | 264 | 54 | 2.3E-13 | ||
| SMART | 270 | 467 | 198 | 5.0E-70 | ||
| Gene3D | 285 | 464 | 180 | 3.4E-112 | – | |
| Pfam | 303 | 465 | 163 | 3.4E-49 | ||
| CDD | 303 | 465 | 163 | 2.52914E-76 | ||
| MobiDBLite | 471 | 490 | 20 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Biological process | Proteolysis | The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds. | ||
| Molecular function | Serine-type peptidase activity | Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine). |
Expression pattern of LotjaGi5g1v0147300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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