Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0170500 |
| Transcript ID | LotjaGi5g1v0170500.2 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Kinase family protein; TAIR: AT3G63280.1 NIMA-related kinase 4; Swiss-Prot: sp|A2ZMH2|NEK2_ORYSI Serine/threonine-protein kinase Nek2; TrEMBL-Plants: tr|I1L868|I1L868_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0170500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:43897595..43902864) extracted from Lotus japonicus Gifu genome v1.2.
GGTATTGTGACTATTTGTGAGTGAGAGGGCGGCAAATGAAAAGAGAATTGGAAAAAGAAGTAATGCAAGCAAACTGAAAA AGAAAAAGACAGAGCCAGAAATGGTTCAACAAACACATCACATAGAAATAGGAGCAGGTCAAAGTCTTCAAAAGTGTGTG TATTCCGGGAAAAGGACGCAAGCAACAAAAAGAGAGAGAAAGAAATAAATTAAAGAGAGAGCAGAGCACGGGAACACTGA TGTAAGGACACTAGCTAGGGGGTCCTCACGCTTCTCTTCCACTCCACATTTACTTCAAATCACCATTTTCAACTTGGTGA TTATTTTTTTAGTTTCACTCTTTCTCTCTGAATGAAGTGAAGTGAAGTGGGTTTGATTTTCAGCTGAAAAAATGGAGCAG TATGAAGTTCTAGAACAGATTGGCAAGGGTTCCTTTGCTTCTGCTCTGCTTGTCAGGCACAAGCACGAAAACAAAAAGTA ACCACCCCATTCTACTCTCATTTCTTCTAAGTTCTAACTCAGTAATCTATGTTTGATTCAACTAGGTTATTTTACTTCAA ATGTTTTATTTATCATGTTTGGTTATACTAAGCTCCTATGTTAATTTTTATGTATTCAGGTATGTTCTTAAGAAGATTCG CCTTGCCCGCCAGACTGACAGAACACGTAGATCTGCACACCAGGAGGTAGTAGTAGTAATAATGCTCCTTGTTTTTTTTC CTTTTTTTTTAGTTGAAGTTTAATTTTTTTGGCAGCTTGAGATGTTTTAGCCTAAGTTTTATAATTGATTTTTAGTCCAT AACGTATAATAGTTACAATGCAGTTCTTTCTAATTATTGGGTTACATTCTAAAATGTGATACTGGATGCTTGCTATTCTT ATATGCTTTGTTGGACTCTGGTTTTGCAGATGGAGCTCATCTCTAAAGTGAGAAATCCATTTATTGTAGAGTATAAAGAT TCATGGGTAGAAAAGGTCAGACATTTAAAAAAATCAATAATTTTTTTTTGTAAAATATTGTTGCTTTTTCTTGTTCTGTT GTGTTCTGGTTAATTTGATTTACTAAGATTTTCAGGAGACCCCCCATTTTAGTTTAAGTTGACAAAAGTGAATAATATTC ACTTGTTTCTTCATAAATGCTGATACTTTTAGTTGATGGTGGAACATCCTAATGTAACACGGTATATGGTTTTATACTAT TTTATTAATTTTGATTCTGAAATTTGCAATCTGGTACCTTCACCTCCAGGGTTGTTTTGTATGTATTGTCATTGGCTACT GTGAAGGAGGAGATATGTAAGTCATGGTTCACATTGAATTCAAGCATTTGAGGAACTCAGAATATTTATGGAGACATTTT ATCTTTCCTTTGCTAATAATACATTCCCTCTATAATTTATATGCTGCACAGGGCTGAAGCTATTAAAAAGGCCAATTGTG TTCATTTTTCGGAAGAGGTTTGTCACTCTTGCAGCAGCTTCTTTTACTTCTGAATAATTTTCATTCCTATGTGAAAACCT GTTGGTGCTTTTAACTAATTGATATCTATAAACTTTTGTACGCAGAGGCTTTGTAAATGGCTTGTTCAACTGCTGATGGC ACTTGATTACTTGCATGCAAATCATATTCTTCATCGTGATGTCAAGGTGAATGATTTCTCTAAATTCAATAACCGATGGG GTTATGTAGCTGGCTATCTGAAACCTTCGAGAACCTACTTTATACTGATGTTTATCCACATCAATTTCAGTGTTCAAATA TCTTTTTGACAAGAGATCAAGATATACGTCTAGGTAATGACTTTCTTCATTCTATCCTTTAGCCTCACTCAGACTTCATG AATGTGTTCAAAGTGTAAACATCTCTAATTTGTGCCTTGTTTTGGTAACCTATTCTTATGCATGGATGCAGGTGACTTTG GTCTTGCCAAAATGTTAACATGTGATGATCTTGCTTCCTCGGTACGTGTTTTGGTCAAAATATTCTTTTGATCACTTTTA CTTTATCTCTTACTGTGTTCTTGACTTGCTTTACACTTCAGGTTGTGGGAACACCAAGTTATATGTGCCCAGAGCTCCTG GCTGATATACCCTATGGCTCTAAGTCAGATATCTGGTCTTTGGGTAAGATAGTACTATTTGTACTCTCAAGATCCTGTGG GCATAAAAACCCTTCCCCTTTCCCTGTTACAATTTTCTGTCAATTGCAATTGAAATTGGGTATAACATAAACATTGTGTC AGGATGCTGTGTATATGAAATGGCTGCTCACAAGCCAGCTTTTAAAGCTCTTGTAAGTTACTATGACTGCCAGTTGTTCA CTTCTATTTTAATGAACCATTATTTGCAGAACTTTTTTATCATAAGGGGAACCTGGTGGGGGGTCAAATAATTCATTTGA AATGTTGAACAAAATATTTACGTTACTTCATCATTCATGTCCATGGTGATGTCTGAGTTATTTCATTATGGAGAACAACA TCAAATCAATGACTTTTTGTTGTCTTCTATTCGAGCAGGATATGCAAGCATTGATTAACAAAATAAACAAGTCTTTAGTG GCTCCACTACCAACAATGTATTCTGGTTCTTTGTGAGTACTCTATTTACTAAGAATCTTATGTTAATCTTTATCTGTATT TTCCCCATTTTATGAAGCGGTTATGTTAGTTCCCATACCTGCAGCATTTGAGTGATGTCTGTGCCTGGTTTATTGGGATA TGCATATATTGCTGATCCTGAAAAAAATGCATCCATTAGTTTGTCAGACGGAGACCTCCATTAGATTTTGTCTTACATTT TCTAATGGACCCAAAGTTGTTGCGAATTGGAAATTTAAGTGATCTTGCATCCATGAAGTGTTTATGTCATCATTTTGAAA ACATCTACACCTTATCTTTCAATTCACTTAGTATTAGCATTCTTTGTGTCAGAAACATGTACAGTATGGGGTTTGGTTTA CCAATTTACATTGTGCAATGATAACCTGCTGGTTTAGCAGCAATCAACCTTGAAACAAATCCTAATACACTCCCAGATGT GGATATATCTTATTGACTCATTCTCAGTCTTTGTACTTGTTATTTGTTGCTGTTTATTCCATTGACCCATTAAATGACTT TATGTAACTTGATGTATATTGTTTTCTTCTTTCAGTCGAGGCCTTGTGAAGAGTATGCTACGGAAAAATCCAGAGCTTAG GCCAAGTGTATGTTTTCTCTCGAGAATTTCTTTTATATTTTTCTATATGTAGATTAACTTAGGAAAAACTGGTCTATACA AAGTAAGTGTAATGCATATCTTGAGTTATAAAGATGAGTCAGATGTCCTAACAGCAGAATATGTTTAGAAGCAGAATATG AGCCAATTGTTATGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTAAATTGTTTGTCAGCGTGTAATTTG CTCTTTTTCCATCATCATATAATGTGTTTGTGCTTATTCTGCTTGGTTACTTTGTTTTGGTAGATTTATTCAAAATGAGT TAAGCGCAATTTGTTTTCGCAGGCAGCAGAGTTACTCAATCATCCACATCTTCAACCTTATATTCTTAAAGTTCACATAA AACTAAATAGCCCCAGAAGAAGTACTTTTCCTTTCCAATGGGCTGACTCAAACTATGCAAGGAGAACACGGTTTGTAGAG CCAGCATCTTTTTCCACTCTTTCTGTCTCCGACAGAGGTAAACGATTGTCATTCAGTAATGACAGGGCCTTGAATCCTAG TATTTCTGGAACTGAACAAGGTTCTCTGTGTTCTACTCAAAGAGCACAAGGATTCTCTGCTTGTTCAAAAGACAAACATT ATGAACAATCTGTTGGCTGTGTCAGTGAAGAATGCAATATGCCAAGAATGAGAACAGCTAAGGAATCTGCCACCCCCAGA CGACACACAATACCATCGAAGATACCCCGAATTAGTTCCAAATATGATTCAGTAAGTTTAAGCACACTAACAACACAGCA GCTCCATTTGTATTCATTTGATAATATAGTGCTAATTACGGAGTTTTCTAATTACATATCACCTATATTTCCTAACTCGA GTTTAGTTACTCTTATACGCAGATTCTCTTATCCATATTAATTTTCAATAGAGCTTAACTTGTCTGGGTTTCTTTGTTGA ATTAATAGTGTGTGTGTGTGTGTGTGTTACTGAAGATTCTGTGCATCGATTTATTTGTTTGCTTATCATCATTTCAGCTT CCAGCATCTTATACTCCAGCTGGTAAACTTACCCCACCAACTCGCAGAGCTTCCCTTCCACTGCCTACAACAACCATGGC CACTACTACCCCTTATAGAACCAGTGTCGGTTTTCTTCGTAGTGTGGATTCTCCTAATATTTCTGTTAATGCGCCACGAA TCGACAAGATGGCTGAATTCCCTCTGGCCTCCGGTGAGAATATTCCTCTCTTCCCTGCTCGTAGAGCTTCATCAACATCA GCTCAGTGCTCTTCTGGTTCCCCAAGGAGCATTATTGACTGCACAATCACAAAGGACAAATGCACAATCCAGGTTGTGGA CAAAGCCAGTGTCCCTACCAGTGGCAGTGATGGTGGTGCTGCAGTTTCACATAGCAACGAGTGCTCTGAACATGTAGCAA CTGCTGTTTCAAGCCGTAGCCATTCCTCCTCTGCTGAGTCTTGCCAGCGCAGGTTTGACACCTCGTCTTACCAGCAGCGA GCGGAGGCATTGGAGGGGTTGCTTGAGTTCAGCGCACGGCTCCTGCAACAGCAGAGGTTTGAAGAGCTTGGCGTGTTGCT GAAGCCGTTCGGGCAAGAGAAGGTTTCTCCAAGGGAAACAGCTATTTGGTTGACTAAGAGCTTCAAAGAAACTGTGGTAT GAGGCTTTCTGATGCACATGCACTTTTGTGATCACTAACAACAGTGTAAATCAATGTAGCAGTAGACAGTAGTACTTTAT ATGTAGCTAGAATTTGAAGGGTAACTTAGCTTCTAATCTTATAATTCTAGTTGACTCCGTAGGTAGGCATTTCTTAGACA GTTTCAACTTTCAAGTTTAATGTTAATGACTTTCTCATCAAAATATCAGTATAGATGTTCAAATTCTTCTGTTTGCGGGA AAAGAAACTCTAATTTAGTTTGTAATGTAGGCAATGTCAGTATGAAAAAAGTTTATCCTTCCATTTTGTGATGTATTTTC ACATTATCGAAGTTTTTTTTAGGATACACATTATCTAAGAAGTTTGATAAATAAAATGATAATACATGGG
CDS sequence (LotjaGi5g1v0170500.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGCAGTATGAAGTTCTAGAACAGATTGGCAAGGGTTCCTTTGCTTCTGCTCTGCTTGTCAGGCACAAGCACGAAAA CAAAAAGTATGTTCTTAAGAAGATTCGCCTTGCCCGCCAGACTGACAGAACACGTAGATCTGCACACCAGGAGATGGAGC TCATCTCTAAAGTGAGAAATCCATTTATTGTAGAGTATAAAGATTCATGGGTAGAAAAGGGTTGTTTTGTATGTATTGTC ATTGGCTACTGTGAAGGAGGAGATATGGCTGAAGCTATTAAAAAGGCCAATTGTGTTCATTTTTCGGAAGAGAGGCTTTG TAAATGGCTTGTTCAACTGCTGATGGCACTTGATTACTTGCATGCAAATCATATTCTTCATCGTGATGTCAAGTGTTCAA ATATCTTTTTGACAAGAGATCAAGATATACGTCTAGGTGACTTTGGTCTTGCCAAAATGTTAACATGTGATGATCTTGCT TCCTCGGTTGTGGGAACACCAAGTTATATGTGCCCAGAGCTCCTGGCTGATATACCCTATGGCTCTAAGTCAGATATCTG GTCTTTGGGATGCTGTGTATATGAAATGGCTGCTCACAAGCCAGCTTTTAAAGCTCTTGATATGCAAGCATTGATTAACA AAATAAACAAGTCTTTAGTGGCTCCACTACCAACAATGTATTCTGGTTCTTTTCGAGGCCTTGTGAAGAGTATGCTACGG AAAAATCCAGAGCTTAGGCCAAGTGCAGCAGAGTTACTCAATCATCCACATCTTCAACCTTATATTCTTAAAGTTCACAT AAAACTAAATAGCCCCAGAAGAAGTACTTTTCCTTTCCAATGGGCTGACTCAAACTATGCAAGGAGAACACGGTTTGTAG AGCCAGCATCTTTTTCCACTCTTTCTGTCTCCGACAGAGGTAAACGATTGTCATTCAGTAATGACAGGGCCTTGAATCCT AGTATTTCTGGAACTGAACAAGGTTCTCTGTGTTCTACTCAAAGAGCACAAGGATTCTCTGCTTGTTCAAAAGACAAACA TTATGAACAATCTGTTGGCTGTGTCAGTGAAGAATGCAATATGCCAAGAATGAGAACAGCTAAGGAATCTGCCACCCCCA GACGACACACAATACCATCGAAGATACCCCGAATTAGTTCCAAATATGATTCACTTCCAGCATCTTATACTCCAGCTGGT AAACTTACCCCACCAACTCGCAGAGCTTCCCTTCCACTGCCTACAACAACCATGGCCACTACTACCCCTTATAGAACCAG TGTCGGTTTTCTTCGTAGTGTGGATTCTCCTAATATTTCTGTTAATGCGCCACGAATCGACAAGATGGCTGAATTCCCTC TGGCCTCCGGTGAGAATATTCCTCTCTTCCCTGCTCGTAGAGCTTCATCAACATCAGCTCAGTGCTCTTCTGGTTCCCCA AGGAGCATTATTGACTGCACAATCACAAAGGACAAATGCACAATCCAGGTTGTGGACAAAGCCAGTGTCCCTACCAGTGG CAGTGATGGTGGTGCTGCAGTTTCACATAGCAACGAGTGCTCTGAACATGTAGCAACTGCTGTTTCAAGCCGTAGCCATT CCTCCTCTGCTGAGTCTTGCCAGCGCAGGTTTGACACCTCGTCTTACCAGCAGCGAGCGGAGGCATTGGAGGGGTTGCTT GAGTTCAGCGCACGGCTCCTGCAACAGCAGAGGTTTGAAGAGCTTGGCGTGTTGCTGAAGCCGTTCGGGCAAGAGAAGGT TTCTCCAAGGGAAACAGCTATTTGGTTGACTAAGAGCTTCAAAGAAACTGTGGTATGA
Protein sequence (LotjaGi5g1v0170500.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEQYEVLEQIGKGSFASALLVRHKHENKKYVLKKIRLARQTDRTRRSAHQEMELISKVRNPFIVEYKDSWVEKGCFVCIV IGYCEGGDMAEAIKKANCVHFSEERLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLTCDDLA SSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMAAHKPAFKALDMQALINKINKSLVAPLPTMYSGSFRGLVKSMLR KNPELRPSAAELLNHPHLQPYILKVHIKLNSPRRSTFPFQWADSNYARRTRFVEPASFSTLSVSDRGKRLSFSNDRALNP SISGTEQGSLCSTQRAQGFSACSKDKHYEQSVGCVSEECNMPRMRTAKESATPRRHTIPSKIPRISSKYDSLPASYTPAG KLTPPTRRASLPLPTTTMATTTPYRTSVGFLRSVDSPNISVNAPRIDKMAEFPLASGENIPLFPARRASSTSAQCSSGSP RSIIDCTITKDKCTIQVVDKASVPTSGSDGGAAVSHSNECSEHVATAVSSRSHSSSAESCQRRFDTSSYQQRAEALEGLL EFSARLLQQQRFEELGVLLKPFGQEKVSPRETAIWLTKSFKETVV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 604 | 604 | 0.0 | – | |
| SUPERFAMILY | 1 | 316 | 316 | 2.43E-82 | ||
| PANTHER | 1 | 604 | 604 | 0.0 | – | |
| Gene3D | 1 | 83 | 83 | 3.0E-21 | – | |
| CDD | 3 | 258 | 256 | 7.87857E-136 | – | |
| ProSiteProfiles | 4 | 258 | 255 | 44.951 | ||
| SMART | 4 | 258 | 255 | 2.9E-82 | ||
| Pfam | 4 | 257 | 254 | 2.5E-63 | ||
| ProSitePatterns | 10 | 33 | 24 | - | ||
| Gene3D | 84 | 273 | 190 | 5.5E-57 | – | |
| ProSitePatterns | 125 | 137 | 13 | - | ||
| MobiDBLite | 395 | 419 | 25 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi5g1v0170500.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…