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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0220600 |
| Transcript ID | LotjaGi5g1v0220600.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Beta-mannosidase, putative; TAIR: AT1G09010.1 glycoside hydrolase family 2 protein; Swiss-Prot: sp|Q5H7P5|EBM_LILLO Mannosylglycoprotein endo-beta-mannosidase; TrEMBL-Plants: tr|I1NIZ2|I1NIZ2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0220600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:52699270..52705041) extracted from Lotus japonicus Gifu genome v1.2.
AACTAACCAAATAAACTAGAAACTAACCAGAAAAATTGATTGGAAAATGAAGTGAAGTAAAAAGAGTGAAGAATGCTGTA AACTGAAGCAATCTATCTACAAGTAATATATATAGATAGGATATATAAGATCTTTGGCACATGTGTGGGCAACGTTGTTT GTCAGTTGCATAGACATATCTCACGTGCCTCACATAACTTGATTAATTAGATTCAGCTCTGTCTGTGTCTGTGTCTGTCT TGTGCTTAATTACCGACATAAATTATAGTAGTAATATTATCTAGCTAGAATCTATCTACCAATGTTATGGCTCACTGAAA CACACACCCAAGAGTAGAGTACAGAAGACAAGGCTCATTGTTGGTATCAGTGTAATGGGCAAGATGCAAGGGAAGACAAA CCTGGATTCTGGGTGGCTAGCTGCAAGGTCCACTGAGGTCCATTTCAATGGCTCTCAGCTCACCACCACTAACCCTCCTT CTCTTACTGGCCCCACTGAACCATCACCATGGATGGAAGCTCTTGTCCCTGGAACGTAATCTCTCTGTTCTGTACTGTAA TGCTTCATACATTGTATTGTACTATCTATAGTGACTGTGATTTATTAAGGGATGTTGTTTTTAATTTACTGACAGTGTTC TGGCAACCTTGGTGAAGAACAAAGTGGTGCCTGATCCTTTTTATGGACTAGGAAATGAGGCAATCTTAGATATTGCTGAT TCTGGAAGAGACTATTACACTTTCTGGTTCTTTACAACCTTTCACTGTAAACTGGTAGGTTATGAATTGTGTTCTGCTAT CTCTGTTTATACCATTTTAGATTGATTCACTGCACCTGTTCCCCTCTTTCCGCTTATATGTTCCAATACAAAATTGCCCT TTTTATTGCCAAATTTTGCTGTCTGTTTAATTTGAGTTAAGCCAAATTGAAATGTGATACTTTGAAGTGAGTTTATGGAC TTGGTTTTTAAGTTCAACCCAGATAGAGATGTGATTTTCCTTGTTTGGTGATTCTAGACATTGCTAATTACTGGATCCTT TGCAGGCAGGCAATCAGCACTGTGATCTGAACTTCCGTGGAATCAATTACTCAGCCGATGTTTACTTAAACGGGCACAAA ATGGTCCTCCCGAAAGGAATGTTTCGGAGGCATTCTCTTGATGTCACTAGTATTCTTCATCCTGATGGCAATAACCTGCT CGCGGTTCTTGTTCATCCTCCTGATCATCCTGGGAGTATCCCACCTCAGGGAGGACAGGGGGGCGATCATGAGGTCAGGA ATTAAATAAATAAAGCCTATCTTCTAACTGTGTCCTTCTCTATTATCTAACTTCCTGTTATAAGAAAGCATCAAATATCA ACTTAAGTGATTGGTGACTTTTGAAATCTGTTTAGTTTTGGGGAGAGTGGAAGAGATGATGCTTAAGAATATATATATAA GTCATTTATTTTTTGTTTTTCCTTTTGTGTAGATAGGAAAGGATGTGGCTACACAATATGTTCAAGGTTGGGACTGGATA GCTCCTATAAGGTGACATTGCTATTACCTGTGTGGTAAATAATTTTCTTTTTCCTTGAATTGAAAACCTACCATTCTTTA TTGGTTAGCCACTGCTAGGTCATAGATCCTTGTATGGTAACAAGCTGGAAATCTCACCATTATTATAATATTGCTTTGTC AACATGAGAAAATTTTACTGTCATTCATTTTCACTCACAATGAATGTTGTTGCAAAAGAGGACATATTGCTTACATTGAA CGGGAAAAAAAGGCATCAAATGAGTAGATGCATACATTAGTATATATCATCTCACACTGAAATTTCTTTAGGACATGTTC CTTAATGACTTTATGATGTTCTCATAAGCACATGAAAAGGAAAGGAAAACGGAACTAATTTTAGGGAATTTTGGAATTGC TTATTGACTGCCTATAGAGTTTTGATCAGTTTCTGAGCTATGAAGAAGCAATATAATGCAAACTGTATTAGCAACTAATA ACTAATGCAAGTATTAAATTTGATTGCAGGGATAGGAATACTGGAATTTGGGATGAGGTTTCCATTTTTATTACCGGGGT GAGTTGAATAAAATGCTTTAGTTCCTTCCAATGTCTATGGTTTATAACCCAAACACCTAAGAATTGAGACCAATTGCAAA TCCTTTTCTTTCTCTTTGCAATGCACTGTCTTTTCTCTTTACCCCAAAACAAGAGTTTAGCTTTTCGTCTATTCTTATCT AGTTCATAATTAAATATTGCTGAATTTCTCTGGATCTGACCATGATGAGAAATAATGTGGGAAATCACTGGGATGTCTGG AAAACAAAACCAGAATATTGTAGAGACATGGGCTAAACATCGAAATTGCTTTGTTAATTTTGCTTTTCATGCATTTCAAA AATTGAGGAAGCATGTCATAGATATGATTTTTTTAAATTTAATGGTGTTTCCAGCAGTTCGTTGATAGGATGATTCTGTT GTCTGTGTTTGCTGCAGCCAGTGAAAATAATTGATCCCCACTTGGTGTCATCATTTTTTGACAATTACAAGAGAGCATAT CTACATGCCACAACAGAGTTAGAGAACAGGAGCTCCTCGACTGCTGAATGCTCTTTGAGTATCCATGTCACAGCAGAACT TGAGGGAAGCATTCACCTAGTAGAGCAGCTTCAAACTCAAAATATTTCAGTTCCTGCAGGATCACGGGTGCAATATACAT TTCCTGAGGTCTGGGGAAAACTTGTCTGTGTGACTTATGTCACATTTTAATTTTTTCCAGAATTTACAAAGCCTGCGATC CTGTATTGATAATTTTTTGTATCCTTGTTTTACTTGATCCTGTTAATTTGCATAATAAAGTAATAATGGGATGATTGGCA GCTCTTCTTCTACAAGCCCAATTTATGGTGGCCTAATGGAATGGGGAAGCAATCTTTGTACAATGTTGTTATTGACATTG ACGTTAAAGGATTCGGTGAGTCTGATTCGTGGAGCCATTACTTTGGATTCCGCAAAATTGAGAGCCACATTGATGGTGCT ACTGGTGGAAGGTATGGTGGTTGTAATGTTTCTTCAATGTTGTAATATTTTACTTTTCCTTGTTAAAAATAATTCAAGCT TTAAACTGTTTTTGTATATGTTCTTCTGCATGTATTTTATTTCATAGGTTGTTCAAAGTCAATGGAGAACCAATTTTCAT ACGCGGGGGTAACTGGATATTGTCTGATGGACTACTGCGACTGTCAAAGAAGCGATATAGTACAGATATCAAGTTTCATG CAGATATGAATTTTAACATGATTCGGTGCTGGGGCGGTGGACTGGCTGAAAGGCCAGAGTTTTATCATTATTGTGACTAT TATGGTCTTCTGGTAAGTTGTAATGCACCCTTATTCTTGCTTACATGTGCAGCTTAATATGCTTATATGTGACTATTACT GCACCCTATGTCTTAGACTCTGATACTTATAAGTTGCATTTGTGGCAGTTTTGGTTTATAATTGATCGTGTTGCTGTCTT AAATCTCGTAGGTATGGCAAGAGTTCTGGATTACTGGGGATGTTGATGGACGTGGTGTCCCAGTATCAAATCCGAACGGT CCACTGGACCATGACCTTTTCTTGTTTTGTGCCAGAGACACAGTCAAGCTTCTTAGAAATCATCCCAGTCTTGCCCTCTG GGTTGGTGGAAATGAACAAGTTCCACCACGTGATATAAATGCTGCTCTGAAGAATGATCTAGAACTCCATCCTTATTTTG AACATGTAAATGAAAAGAGAAAACCTTTAGGTGATTTGGAAGATCCTAGTCAGTATCTCGATGGTACACGTATGTACATA AAAGGATCATTATGGGATGGATTTGCAGATGGGAAGGGAGATTTCACTGATGGACCTTACGAGATTCAAAACCCTGAGGA TTTCTTCAAGGATGATTTTTATAAATATGGATTCAACCCAGAGGTTGGTTCTGTTGGAATGCCGGTTGCCGCTACCATAA GAGCAACAATGCCTTCAGAAGGATGGCAGATACCATTGTTCAAGAAACTTCCCAATGGTTATGTAGAGGAAGTTCCAAAT CCCATATGGAAATACCATAAATACATTCCATATTCAAAACCAACCAAGGTTCATGATCAGATTCAGCTTTATGGTGCTGC AAAAGATCTTGATGACTTTTGTTTGAAGGTAAGAGAAAACTTAATCCATATGGCCGTTCGTGATGCATTTTTAATCCCCG TACCTCTTTTTGTTCTGTTGTTGATATTTATGTAATATTCTTAGGCTCAACTTGTTAACTACATACAATATAGAGCTCTT TTAGAAGGATGGAGTTCTCGCATGTGGAGCAAATATACAGGTGTATTGATTTGGAAGACGCAAAATCCTTGGACTGGTCT GAGAGGTCAATTTTATGATCATCTACTTGACCAAACAGCCGGTTTCTATGGCTGTCGATGTGCTGCCGAGCCAATTCATG TACAGCTTAACCTCGCTACATATTGTATAGAGGTAAGTACCTAACCCGTTTGGAAGAGCTTATTTGAGCTTATCTTACAA CCTAAATGCTTATGCAAGTGTTTGAGAGAGCACTTATGTAAACAACTTAAGCGCTTATGGTACATAAGCTCTCCTACACA CTTGCATAAGCTTATGTTTGGGAGAGCTTATGTATAATTTAATGATCTAGTTATGAATAGCTTCTTACAGGTTTTGTATA TCATTTTTTTATTTCTCAAAACAGGTTGTGAATACAACATCAGAAGAGTTGTCTAATGTAGCTATTGAAGCCTCAGTGTG GGATCTGGAAGGAACATGTCCATACTACAAAACTCATGAAAATCTCTCTTTGCTGCCAAAAAAAGTAACATCTATTGTTG AGATGAAGTATCCAAAGTCGAAAAATCCTAAGCCAGTCTATTTTCTTCTTCTCAAACTCTACGACATGTCAGATTTTAGA ATCTTATCAAGAAACTTCTATTGGTTGCATCTCCCTGGTGGAGATTACAAGCTATTGGAGCCGTATAGGAAGAAGAAAAT ACCTCTTAAGATAACATCGGAGGTTTTTATTGAAGGATCCACTTATAAACTCCAAATGCATGTGCTGAACTCATCGAAAA GACCAGATACGAAGAGTTTAGTACTTGAGTGCGGTTCAACTGCTAAACAACGCGACAGTTGCATTGTTACAGACTCAGTG GATAACATGCATAATGAGGCTGGAAAAGATCAAGAAGTTGGTTGGTTTAAGAGGATACACAGATGCTTAGCTGGGAAAAG TGATGGCTTGAAGGTTTCTGAAATAAATGGACAAGATATAGGAGTTGCTTTCTTTCTTCATTTTTCTGTTCATGCTTCAA ATAGGGACCACAAGGAAGGGGAAGACACAAGAATTCTCCCTGTTCACTACTCAGATAACTATTTTTCACTGGTGCCCGGA GAGGCCATGACTGTTAAAATCTCTTTCGAGGTCCCTCCAGGTGTCGCTCCTCGAGTTACCCTTCATGGCTGGAATTACCA TGGAAAAGCCATCCATGAAGCTCTTTAGAGATGTCACAGGAAAACTTGTGAACTGATAAAAAGAAATGCATGAGTTTATT TTTTGTTTTCATACTATGTCTTCAAGAGAATTCATATTTCCAATTGTATGTCACGGATGAGACGTATCGACCATGTCAAT TTCCATTGTTTTTTCAATCAGTGCAATAAAAAGGGAAGCTGAGATTGTTAAACCATCCTAAAAAGAAATATTATTTTTAA ACGTTCCTTTAA
CDS sequence (LotjaGi5g1v0220600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGCAAGATGCAAGGGAAGACAAACCTGGATTCTGGGTGGCTAGCTGCAAGGTCCACTGAGGTCCATTTCAATGGCTC TCAGCTCACCACCACTAACCCTCCTTCTCTTACTGGCCCCACTGAACCATCACCATGGATGGAAGCTCTTGTCCCTGGAA CTGTTCTGGCAACCTTGGTGAAGAACAAAGTGGTGCCTGATCCTTTTTATGGACTAGGAAATGAGGCAATCTTAGATATT GCTGATTCTGGAAGAGACTATTACACTTTCTGGTTCTTTACAACCTTTCACTGTAAACTGGCAGGCAATCAGCACTGTGA TCTGAACTTCCGTGGAATCAATTACTCAGCCGATGTTTACTTAAACGGGCACAAAATGGTCCTCCCGAAAGGAATGTTTC GGAGGCATTCTCTTGATGTCACTAGTATTCTTCATCCTGATGGCAATAACCTGCTCGCGGTTCTTGTTCATCCTCCTGAT CATCCTGGGAGTATCCCACCTCAGGGAGGACAGGGGGGCGATCATGAGATAGGAAAGGATGTGGCTACACAATATGTTCA AGGTTGGGACTGGATAGCTCCTATAAGGGATAGGAATACTGGAATTTGGGATGAGGTTTCCATTTTTATTACCGGGCCAG TGAAAATAATTGATCCCCACTTGGTGTCATCATTTTTTGACAATTACAAGAGAGCATATCTACATGCCACAACAGAGTTA GAGAACAGGAGCTCCTCGACTGCTGAATGCTCTTTGAGTATCCATGTCACAGCAGAACTTGAGGGAAGCATTCACCTAGT AGAGCAGCTTCAAACTCAAAATATTTCAGTTCCTGCAGGATCACGGGTGCAATATACATTTCCTGAGCTCTTCTTCTACA AGCCCAATTTATGGTGGCCTAATGGAATGGGGAAGCAATCTTTGTACAATGTTGTTATTGACATTGACGTTAAAGGATTC GGTGAGTCTGATTCGTGGAGCCATTACTTTGGATTCCGCAAAATTGAGAGCCACATTGATGGTGCTACTGGTGGAAGGTT GTTCAAAGTCAATGGAGAACCAATTTTCATACGCGGGGGTAACTGGATATTGTCTGATGGACTACTGCGACTGTCAAAGA AGCGATATAGTACAGATATCAAGTTTCATGCAGATATGAATTTTAACATGATTCGGTGCTGGGGCGGTGGACTGGCTGAA AGGCCAGAGTTTTATCATTATTGTGACTATTATGGTCTTCTGGTATGGCAAGAGTTCTGGATTACTGGGGATGTTGATGG ACGTGGTGTCCCAGTATCAAATCCGAACGGTCCACTGGACCATGACCTTTTCTTGTTTTGTGCCAGAGACACAGTCAAGC TTCTTAGAAATCATCCCAGTCTTGCCCTCTGGGTTGGTGGAAATGAACAAGTTCCACCACGTGATATAAATGCTGCTCTG AAGAATGATCTAGAACTCCATCCTTATTTTGAACATGTAAATGAAAAGAGAAAACCTTTAGGTGATTTGGAAGATCCTAG TCAGTATCTCGATGGTACACGTATGTACATAAAAGGATCATTATGGGATGGATTTGCAGATGGGAAGGGAGATTTCACTG ATGGACCTTACGAGATTCAAAACCCTGAGGATTTCTTCAAGGATGATTTTTATAAATATGGATTCAACCCAGAGGTTGGT TCTGTTGGAATGCCGGTTGCCGCTACCATAAGAGCAACAATGCCTTCAGAAGGATGGCAGATACCATTGTTCAAGAAACT TCCCAATGGTTATGTAGAGGAAGTTCCAAATCCCATATGGAAATACCATAAATACATTCCATATTCAAAACCAACCAAGG TTCATGATCAGATTCAGCTTTATGGTGCTGCAAAAGATCTTGATGACTTTTGTTTGAAGGCTCAACTTGTTAACTACATA CAATATAGAGCTCTTTTAGAAGGATGGAGTTCTCGCATGTGGAGCAAATATACAGGTGTATTGATTTGGAAGACGCAAAA TCCTTGGACTGGTCTGAGAGGTCAATTTTATGATCATCTACTTGACCAAACAGCCGGTTTCTATGGCTGTCGATGTGCTG CCGAGCCAATTCATGTACAGCTTAACCTCGCTACATATTGTATAGAGGTTGTGAATACAACATCAGAAGAGTTGTCTAAT GTAGCTATTGAAGCCTCAGTGTGGGATCTGGAAGGAACATGTCCATACTACAAAACTCATGAAAATCTCTCTTTGCTGCC AAAAAAAGTAACATCTATTGTTGAGATGAAGTATCCAAAGTCGAAAAATCCTAAGCCAGTCTATTTTCTTCTTCTCAAAC TCTACGACATGTCAGATTTTAGAATCTTATCAAGAAACTTCTATTGGTTGCATCTCCCTGGTGGAGATTACAAGCTATTG GAGCCGTATAGGAAGAAGAAAATACCTCTTAAGATAACATCGGAGGTTTTTATTGAAGGATCCACTTATAAACTCCAAAT GCATGTGCTGAACTCATCGAAAAGACCAGATACGAAGAGTTTAGTACTTGAGTGCGGTTCAACTGCTAAACAACGCGACA GTTGCATTGTTACAGACTCAGTGGATAACATGCATAATGAGGCTGGAAAAGATCAAGAAGTTGGTTGGTTTAAGAGGATA CACAGATGCTTAGCTGGGAAAAGTGATGGCTTGAAGGTTTCTGAAATAAATGGACAAGATATAGGAGTTGCTTTCTTTCT TCATTTTTCTGTTCATGCTTCAAATAGGGACCACAAGGAAGGGGAAGACACAAGAATTCTCCCTGTTCACTACTCAGATA ACTATTTTTCACTGGTGCCCGGAGAGGCCATGACTGTTAAAATCTCTTTCGAGGTCCCTCCAGGTGTCGCTCCTCGAGTT ACCCTTCATGGCTGGAATTACCATGGAAAAGCCATCCATGAAGCTCTTTAG
Protein sequence (LotjaGi5g1v0220600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGKMQGKTNLDSGWLAARSTEVHFNGSQLTTTNPPSLTGPTEPSPWMEALVPGTVLATLVKNKVVPDPFYGLGNEAILDI ADSGRDYYTFWFFTTFHCKLAGNQHCDLNFRGINYSADVYLNGHKMVLPKGMFRRHSLDVTSILHPDGNNLLAVLVHPPD HPGSIPPQGGQGGDHEIGKDVATQYVQGWDWIAPIRDRNTGIWDEVSIFITGPVKIIDPHLVSSFFDNYKRAYLHATTEL ENRSSSTAECSLSIHVTAELEGSIHLVEQLQTQNISVPAGSRVQYTFPELFFYKPNLWWPNGMGKQSLYNVVIDIDVKGF GESDSWSHYFGFRKIESHIDGATGGRLFKVNGEPIFIRGGNWILSDGLLRLSKKRYSTDIKFHADMNFNMIRCWGGGLAE RPEFYHYCDYYGLLVWQEFWITGDVDGRGVPVSNPNGPLDHDLFLFCARDTVKLLRNHPSLALWVGGNEQVPPRDINAAL KNDLELHPYFEHVNEKRKPLGDLEDPSQYLDGTRMYIKGSLWDGFADGKGDFTDGPYEIQNPEDFFKDDFYKYGFNPEVG SVGMPVAATIRATMPSEGWQIPLFKKLPNGYVEEVPNPIWKYHKYIPYSKPTKVHDQIQLYGAAKDLDDFCLKAQLVNYI QYRALLEGWSSRMWSKYTGVLIWKTQNPWTGLRGQFYDHLLDQTAGFYGCRCAAEPIHVQLNLATYCIEVVNTTSEELSN VAIEASVWDLEGTCPYYKTHENLSLLPKKVTSIVEMKYPKSKNPKPVYFLLLKLYDMSDFRILSRNFYWLHLPGGDYKLL EPYRKKKIPLKITSEVFIEGSTYKLQMHVLNSSKRPDTKSLVLECGSTAKQRDSCIVTDSVDNMHNEAGKDQEVGWFKRI HRCLAGKSDGLKVSEINGQDIGVAFFLHFSVHASNRDHKEGEDTRILPVHYSDNYFSLVPGEAMTVKISFEVPPGVAPRV TLHGWNYHGKAIHEAL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 4 | 976 | 973 | 0.0 | – | |
| PANTHER | 4 | 976 | 973 | 0.0 | ||
| SUPERFAMILY | 5 | 211 | 207 | 8.36E-37 | ||
| Gene3D | 19 | 209 | 191 | 1.5E-36 | ||
| Gene3D | 213 | 333 | 121 | 2.5E-20 | ||
| SUPERFAMILY | 213 | 333 | 121 | 1.15E-20 | ||
| Pfam | 214 | 333 | 120 | 2.3E-12 | ||
| SUPERFAMILY | 330 | 696 | 367 | 5.8E-68 | ||
| Gene3D | 338 | 695 | 358 | 3.1E-74 | – | |
| Pfam | 347 | 478 | 132 | 5.0E-5 | ||
| ProSitePatterns | 455 | 469 | 15 | - | ||
| SUPERFAMILY | 696 | 799 | 104 | 2.3E-24 | ||
| Gene3D | 696 | 795 | 100 | 3.6E-20 | ||
| SUPERFAMILY | 783 | 970 | 188 | 1.8E-26 | ||
| Gene3D | 887 | 973 | 87 | 1.5E-13 | ||
| Pfam | 902 | 966 | 65 | 4.6E-11 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity, hydrolyzing O-glycosyl compounds | Catalysis of the hydrolysis of any O-glycosyl bond. | ||
| Biological process | Carbohydrate metabolic process | The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule. | ||
| Molecular function | Mannosylglycoprotein endo-beta-mannosidase activity | Catalysis of the hydrolysis of the alpha-D-mannosyl-(1->6)-beta-D-mannosyl-(1->4)-beta-D-N-acetylglucosaminyl-(1->4)-beta-D-N-acetylglucosaminyl sequence of glycoprotein to alpha-D-mannosyl-(1->6)-D-mannose and beta-D-N-acetylglucosaminyl-(1->4)-beta-D-N-acetylglucosaminyl sequences. |
Expression pattern of LotjaGi5g1v0220600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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