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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0044300 |
| Transcript ID | LotjaGi6g1v0044300.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | ATP dependent RNA helicase; TAIR: AT1G55150.1 DEA(D/H)-box RNA helicase family protein; Swiss-Prot: sp|Q6BY27|DBP2_DEBHA ATP-dependent RNA helicase DBP2; TrEMBL-Plants: tr|A0A072UY57|A0A072UY57_MEDTR DEAD-box ATP-dependent RNA helicase; Found in the gene: LotjaGi6g1v0044300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:8347432..8357390) extracted from Lotus japonicus Gifu genome v1.2.
TTCTAGGCGAATAGAGTGAAGATTCACCGATTCTCGGTATTCATCTTCGTCGTCGTTATCAATATCAGTATCATTATCAC ATTCACAACAACAAACGCTCATTTCCTCATAACTCACTCATTTCACTTCACTCCCTCTTCCACTCTACTCTCTGCGTCGT CGTTGATAAACCAAAACGATGTCGTATGTGCCTCCACACCTGAGAAGCGCGACCTCAACCACCGTCGCCACCACCACCAG ACCCTCCTCCTCCGCAACCCTAGACAACCACCACCACACCAAGCTCGCATTCTCCTCCTCACACTCCAACAACAACAACA ACAACTCGTCCCTCTCCAATGGCCCTCGCCGCACCTCCGCCCTCCCTGATCCTCTCTTCCCTCTCTGGCAACCCTCCGAA CGCGTTTCCCGCATGAATCCCCAGCAGGTAACTGTTTTCAATTTTATACGCCACTCTAGGGTTTTTCTTTGAGCTGATTT TATTTTCGTCTGTTTCAGTGATGAACACTTTTTTGGTGTTTTTGAATCTTAGCGAGTGATGCATATGTTAATGTTATAGA CTTGGTAGTTTAAGCTAAGATATTCATCAAGGCATGGTTGAGGTTTTGTTTGGTTTCGAATGGCGATATGGTGTATACTG ACATTTTGCTTGTAGTGACTCCTCAGGGTTCGAACCTTGGACCCTTCACCCTCCCAAACCCTTATGTCCCCTAGCTCTTA CGACTTGAGCTAACCTTCGGGGACAGGCTTTTAAAGTGAGTAAAATGGGTAGAACTGTAGAAGTGAGTTTTGGTCAAAGA AGGGGCTATAAAATTTGCCATTTTACCTTGGAGGATGCAAATTGACTTTTTGTTAAGTTTGTGATGAAGTTGGATTCAAC TTTGTGGTTTATCAAGGGCTGTTAGCTTTTTCTTCAACATCCTGAACCCGGCTGTTTTTTTTTTTCATCTCTTGCTTAAT CTGTCCTTTTCACTTGGTCTCAACTCTCAACAATCTCTTATTCTCTCGTGCTTTGGCTTTCTCTACGGTCTCTCCTTTAG GGTACATTTAATAGAGTCATGACTCATGACTATTTCATTTCCTCTTTTTTAAGATTAAACTAAGCTACCTTCTATCTTTG AATGTTATTATTAGCTGATGTTAGTATGTTACCTATCTCTTGTTTTTATTTATAACCATGTTAGCAAGTATTGGTTGCTG ATTTCTAGTGCTTGCTATATCCAGATTGAAGAGGTCCGCATACGGCTTAATCTTGATGTTACTGCTCCATCTGGCTCTCC TGATGCTCCTACACCTATAGAAACGTTTACTGATATGGTACTTGATTTTATTACTTTTTTAATCATATTCATATTTCTTA TTGGTACTTATGAGCTACCTGTGCCCTGAAAATGAATTGCTTCATTATTGCAAATACATGTAAAATTGTGAATTTCTTTG TTTCAGTGTTTGCACCCAAGTATCATGAAGGATATTGCTTATCACGAATACACCAGACCAACTTCTATTCAGGCACAGGC CATGCCGATTGCTCTTAGCGGAAGGGATCTGCTTGGTTGTGCTGAAACTGGTAGCGGGAAGACTGCAGCTTTCACAATTC CTATGATACAGGTCTGAACTTATTAGACATGACAGGTTTGACTGGTCTTTGTAATGATATCCTTAGATACTTTTTGATGA AAAATAAAAAACAAGTGAATTATAAACTATCGTCCTTTCCTTGTGATTTTTTCCTTTCTATTTTTAGCATTGCTTGGCCC AACCTCCAATTCGGCGCGGTGATGGTCCCCTGGCATTAGTTTTGGCTCCTACAAGAGAACTTGCTCAACAAATAGAAAAA GAGGTGATATATGTAATTTTACTTGGATGAATTGTAGGTTATCTGAGGAATAATTCCTTGTTTATTTCTTGGGTTCTAGA CTTCTAGTTGACAATTTTCTTTGTAAGCTCTAAAAAATTTCAGGACTATCTCCAAGTTTTTCATCTACCTTAATTCACAT GGTGCTTGAGGCATTAATTTTTTTTATTGGCAGGTTAAAGCTTTCAGCAGATCTCTTGAGTCATTTAAAACTGCTATAGT TGTTGGTGGAACTAACATTGAAAAGCAGGTAATCAAATGTTGACATAATAGTTCTCTGCTTCTGCCTGTTTTTGTGAGAC TTTGGTAAAAAACAAATGATGCCTATTGTTTTGTTGGCAACACAAAATTCTTTTAAGTATGGTCAAGGAGCAGCATACAT GTCCTGTATATTAAATATGTTCAAACCATTGCAAATTTTGATATCATTTTGTGTTTGCCTCGGACATAAGTTAAATGTAT GTTTTCACGTAGCTAGTTTTCCTGATAGGCTGATACATGCGTTATGTGTCAAGGGTTGTTGGAAACATGCCAAACACAGT GTAATAGTATTTCATAAGTACTGAGTTTCAGGCACAAGGAGGACCGTTTTTTATTTTAAATTTATTTCTGTTCCACATAA TGGTAAATGATCTTGTGTGCGTTCTCTTTCTGTGTTCTATGATAGAGGTCTGAACTAAGAGCAGGAGTTGAAATTGTGGT TGCCACTCCTGGAAGATTTATTGACCACTTACAACAAGGCAACACTTCCCTCTCGAGAATTTCTTTTGTTGTTCTCGATG AGGCCGATAGAATGCTTGATATGGGTTTTGAACCACAGATCAGAGAGGTTAGTTTTGTTGGTGCCTTTTTACTGTGTGTA AGATTTTCCTTTTGTTTTTTAATGACAATTCCATTCTTATTGTAAGATAGTGTGGCTTCTTCTTCATTGTAGTGTTTTTG ATTTCCTTTACAATGTTTCCAAATTCAGTTGATTCCGTGTAACTGTTCTCCTCTTCAATTCAACTTTTGCCATTATGAAA CCTGGACCTCAAACAAGGTGTTTGACTTAAGACATGACAGTCAAATTTCTTCAAGAAAATTTCAGGAGATCTCCTTAGAA AATAAAACCAAAGGAGGTTACCATTTTCAAAGCAAAATTCAGCAATAAAAATTATGCATTATCTGGGTAAAAATTTAATT TTCATTTCCAGATTTAAGCTTTTAGCCTGTTTCATTTGTATGTACACTGTTCTTAACATGAGTTGGATTTTCCTGACATA ACTATTATGGCCTTGCTTGGAAGTTTTGTGCCTTATTATTGCATATATGATCTCATGTAAAGGGGGTTTTCAGCATTAAA TTACCTTTTTATTCTGTTACTATATAACATTCTTATGTTCACTTAATAGATGTTCATCTAGATTACTAAAGAAACATACA TTTTCTAATATTATACCCAGATAATGAGAAATCTTCCAGAGAAGCATCAAACACTGCTGTTTAGTGCGACTATGCCTGTT GAGATTGAAGAATTATCGAAGGTCAGGTTTCCTTTGTTCTTAACACCATGGTTTCTTTATCATTGTTATTTTCTCCTTTG AGCTATGTAAAAATAATGAGTGGTGCTATTCTGATATTCTTAAGTGACTTTTTTGTTTGCAATGCATATGCCGAGATGAA TTATGAAACAATTCTAGAAATTACCATTTGCTTCACTAAAATTACTTTATGAGTAGTCTTGCTGCTTGATCATAAAGTAT AGTAGCATCTTCAATTGTAGATTAAGTTTGACATTTGAAATATCTTTGTTTCTTCTTTATTTATTTTATCTGTTTCCTGT TTTTTTTTTTCTCTTCACTATTGAATGTTATCCCTAAAATATCCTTTTGATGCATTAATCTTTTTCATTAAGGTATTTCT TTGTAAATTGCTGAAAGATTTTTTTTTTTGACGTTTACCAATCTTCTGTTAAATTTCAGGAGTACTTAACCAGTCCTGTC CAAGTTAAGGTGGGAAAAGTCAGTAGCCCAACAACTAATGTTTCGCAAAACCTTGTGAAGGTTTCTGAAAATGAAAAGGT ACATATACTTAGCTGACAAAGTGCAATTTTGTTATGAGCTGGATTAAAAATTATCAATTTAGTTTCATGTTTTTTCATAG AATATTGGCCATCATTAATCCTCAAAGATTGTTATTAGTTTCTTTCGGTTTCTTGTTTTGGTTCCCCTTGTTTCTGGAGA AAACGCTTCTGGAATACTTGACATGATGTGTGTGTGTGCATATTAGTGAAGTGGGAGAGAATGGGATGAGAGTGAGAAAA AGTTATAGAGCTAAGGATGAGGAGAAGGTGAGGAGTGAGGACAGTGGAGAAAGAAGTTGGATAATCTATTTAATTTATTT ACATTTTTACCTTGAAATTTTTAAAATGTGTAATTCTTTCTCTTCAACTTTTTATTTTTTTGTTACTCTTTTTCAATCTG ACTCTTTTGGTTTCTTCTCTGAAATCTTATTATGCTGTTGTAGATTGATAGGCTTCTAGGTTTGCTTGTAGAGGAGGCAT CACAGGCTGAAAAGTGTGGTCATCCATTCCCATTAACAATTGTGTTTGTTGAGAGAAAGGTAAACTGTGTTCTGTGTTCA TGCTATGTATCAGTATCAGTATCATATTTATATTTTTATTGTCTATTGTATATTTTACATGCAAAAAGTAAAAGTTAAAT GCTTGAATATTTATATTAGTTGTTAGAAGTATCTTCCTAATGGGGTTATTTGCTAGAAATTGGGAGTTTGAGTATATTAG TTCAAAATTGGAACAGTGGGAGTTTGTCCTTACTTGTTCAATTATTTTTATGTGCATATAGACAAGGTGTGATGATGTTT CTGAAGCATTGGTAGCTCAAGGATTATCTGCTGTTTCTCTTCATGGTGGTCGCACTCAGAGTGAAAGAGAGGCTGCCTTG CGTGATTTTCGGAGTGGCTCTACCAGCATTTTGGTACTCTCTCCTACATTACTGGAGCACAATACCCTAGCTTTATCACT TCACCATTTTCTTCCTATATTCTGTGATTCTCTTTAAAGATTTGGTCATGTGTCTCACCACTCCTAGCAGCTAATAGTTT TGAATAGATATCTAAGGTTATGAATATATTGTTGAGAAATATAATGAAGCTAGGTGTCACTTGCCAAAATATAGTGAAGC AGCCTTGGCTTGTTGTGTTCCCTTCGCTAAATGAAATTCCTTGTATCAACATGGGAAAAGAAGAATGCATGGGCTTAATG ATCTTTTTTATAATCTGAATTTTCTAAAAGTATTGTCCTTCTATTTCAGTTTTCTGAACTGATTAAAGTACCATGCACTG CACTTTCTGCATGCTAAAACACTTACCTTTGATATTCATATTGTACATTCCTTTATCCTTCAGACAATTCTAGCTAGAAT TTTGAATGCTCTGCCATTTTTGCATAACTACATTGCAACAGTTTGGGATTTTTTTATCTACTAACCATTTTATACTTTAT TATGCAGGTTGCCACTGATGTTGCATCTCGTGGACTGGATGTCACAGGAGTATCACATGTCATCAATCTAGATCTTCCAA AGGTATTTATGCAATTCTACTCCTAACAAAAACTACTTGATGACTGATTCTTATCTGTAAACCGCTTGGCTAAGGTTATC TGAAAAAGTATGGGGTTATGGGCTTATGGCAGTTAGTGGGTTGCCATTCTGCTACTGCTATGTTGGCATCTCATTTGCCT GGTATTTTTCTGTCCAATTTAATTTTCTTGAGAATTGCACACCTGAAGCTTCAGTTATGGCTGCCTCAATTATAGACCAT GGAAGATTATGTACACCGGATTGGAAGGACGGGGCGTGCAGGATCAACCGGCCTATCTACCTCATTTTATACTGATCGTG ACATGGTACTTTCTATCCTCCTTTTCTTTCAATTAAAGAAATTGAATTGTACATTTTTCTCTTGATTTTAACTTTAATAT AATTCTGCTCTAGTTCCTTGTGGCAAATATAAAGAAAGCAATAGCTGATGCTGAATCTGGAAATACTGTGGCATTTGCAA CTGGAAAGGTACAGTGTTTATTCTGCTTGAATATTAGGACCCCTATCATGGTCCATTTGGTATAACTCTTAAAATTGTAA ATGAAAAATTAAGGAGTGAGTTTTCAATATAATTTTACAGGAGTCTCATCCATGAATTTTTTTACCCATATTTTAAAGGT ATTCTACATGGGAAATTAGTATTTCAGAACTCTTATGGTGTTGGTTGTTTTACTGGGCTGGGCATGGACTTATATTATGC TAGTACTTGCCCTTAGATTAGTGGTATAAATAGGTGTGCTAGGTTTCTGTCCTTTATGCTCAATTTTGCCCAAGCACTGT CAATTCAGGATGTTGTTTCAACCTTGTGCTGTTGGCCTCCAGGTTGCTAGAAGAAAGGAGAAAGAAGCAGCAGCTGCACA AAGAGAGGCAAATATTGTTTTATCCAAACACATTGGATCGGGAGCTGCTTCAGTTAACATTGAAGATAAGTTCAAATTTA TGATGACTGCCTCAAACATTAAAGGAGACGGAGCAGCAGATAGTGCCTGGGATGATTAATGAAGTATCTGGTGCTTCCCA TATTTGGTTGACGGCAATTGCTAAAGCCTTCAAGGTTGGTAATTGGCCCTTTTTTTTCTTGGCTTTTTCCTTTTTCTTTT CAATACTTCATTATAATGTGAACTTTATGTGCATCTCATCTAGACCCATCAAATTAGGAGTAAGATCCACATGATTTAGT ATATCTTACCTGAATTTCACCCAATAAAGAAGTGTTGCTGGCTTGTATTCCTATAACTTATTTATGATGGATCTTCCTGC TGCATCTCACTTACTCTTTCGGACTTTCCCCCTCCACCTAATACTTATTTGATATGCTCTGCTGACTTGGACTTAGTGCA TCTATAGGTTTGTTGCTTCGAAGATGCTGGAGAACGGGCAAGTTTCTTGTTAAGTTTGCGAGTCTACGTATTGTTTCACA CTTGCTAGACACACACTGTAGAGTTTGTCATTTAGGTGATGCATCTTATGTAATCTTAGGAACAATAGTTCTGTTTAAAT TTCTGTTGCTTCAAATATACATTTATTTCCTCATTGTAATTATCTCAGAATTATGTATATCCCGTGCGGTGTATTCCACT CCCATATTTTGTTTGTTACTTTGCATGTTTGAGTACAATGTGCAAAACCACGGTGAGTGAAAACTGGGGTGGATAGAAGC AATTCTCTTGGGTTTTGTAGCTGTCCACCGATTTTTCGCCGTGTATCCAAACATGCATTTTAAGACTTTTAAGCATTTAA CCCATGAAAACAAGGCAATTATGCTTTTTCGATTACAACTTCAGCTATCGTTTGCTCTTTTATTTTGGTGGCCGTCCTTT GTGCTTGTGTCACTCAGTTGTAAGTTTATACACCTTAGATGCTACAAATTGAGCAATTATTTTAAGTAATACTTTTCTTG GGTCAAGTCATTAGTTTACCATTATATTTTAATAAATAGCAAAACTAGTATGTGTAATATACCTTATTATCGATAATTGG GTGGATTATTGAAAAAAATTATAGTATCATCCAAAGAGTCAATCACCTATAACTCATGGATAGTAAGTGTTATCTTCTTA AAAAAAAGTGGATAGAAAGTGTTTCTAAGGCATAAAGTCTACCCTCTTGCAGAAGTTGAAGAATGGAAAACTTGAAACCG AATCCACCACAGAATTTTGCATGCACTGCAACAGAAAATCGACTTCCTTGACTCAACAGAAAAAGTGGGGATACAGATAT CAACTGGTCCACATTTATGAGTTCTCCTCAATATGCAGAGTTTCCTAACTGAACGGATGAGACTTAGAACCAACATATAT AAACAGGTTTGTCATTCAAATCATGAAACTATGGCTACCGTATCTAAGTTCTACTTTCTCATGACCTTGGGTTATATACA TTACACACCAAAGTATAAGAAAGACATCTCAGACACAGGAGTTAGGGTGAGGGAAAGAAAAAAGAATACAAGGGGAAAGA AGGGTAGGGTTATTCTAGTAGATTTTACAAGATCACATGTAATCATGCAGATGTATTAGGTTGCCAAAACTGGGAGCCTC TTGTGTCATATGAAAGCCTCACGAAGCTTGTTATACCCATTTCTGTAGTGTTCAAGTGAGAAGCATAGCTGCCTTATGGC CTCACGTTTCTCTTCAGCACCTTCTAAGATCTCAACCCTTTGTCTCTCAATCTCTTCCTCTAGTTCCTTAGATCTTGCTT TTAGCTCTCTCACCTGTCTTTGTGCCTCTTCCATTCCAGCAATTAGTTGCACATGCTCCATGTGTAACTGCTTCAAATTC ATGTCCATTTGTTCAATCTGATTATCTCTGGAATTTAAAACTTCCTTAAGTGAACCTCCTTCTGCATTGAGATCATCTCT CTCTAATGTTAAAGCATCAATGCTCTCATTGAGATCTTTTATGCTGTTCTTCATGCAGCTATTGTCTTCCTTTAATTGCT CAATTTCTCCTTTGAGTATCTCTTCCATCTCTATTTTTTCAGAATAGATCTTTCTTATCTTCTCTTGCAAAGATTGACAA TGAATTTCCCATTCTCTGACCTTCTCTTCCATATGAGTCTGTTTCTCCATCAATTTGGACATTTCAGACTTTACCTGAGC TTTCTCACAGAAGATTTTTTGCTCTGCATCAGTTAAAGCACTTTTTAAATCCCTGATGTCATGATCTCGGTCTACTAGGC TAGTTTTCAACTTCGCGAGCGTTTCTTGGAGTTTAGTGCTCTCTCTTTTCTCAGAGTTGAATTTCGTTTTCCAACTAGCA CTTTCCTTCTGAGCCAAGTTAAGTTGATCCTGCAATTGCTGAATACTTTCAGATGATTTACTTGCCTCAAATTTCAATGA AGCAATTTCAGTTTCCGAAGACTCAAGTTTTTCTTTTGTGAATCTTAGCTCCATCTCAAATTCTTCTTCAGTTGATGGTA ATTCAGCACCAGCAGTATGAAACTGATCTGGTTCCATTGCTCTCCATTTTTCAAGCTCAGCCTTCAATTTAGAGATTTCC TTCTCCGAGAGTCTTAACTTATCATTCACATACCTCAGTTCTTGTTCATATGCATTAATTTTGGCCCGGACATTATTTTC AGCATTCTCAATTCTTCCCCCTCTACAAGAAGCATCCACACGTTCCTCCTCACGGATGCATAACTTTTCTTTCATCTCAC GCAGCTCAATCTCCAATTCCATCACCCTTCTGTTCATGCTGTGCTCGCTTGCATTCGCAAAGAAACCTGAACAACTATTA AAAGATGAAGCATCATCAAATTCCTCATCAGAATCTGTCAAAGTAGAAGACACATCTCCATCTTTTTGAGATGCAGAATC ATAAGCATTGTTGTTCCCACCAGAACCAAGGAAGAAATCAAAGCCTGCAGCGCGGTTGCTAGATATGCGACGCCCCACTT TTCTAGGAGAAGGAGATGGCCAAGAAGAGGGTGGTTCAGAACCGGTGTCTGAAATACATGAAGCTTGGGATTGGCTATCA GAGTGCATGTTCTTCCCCAATTCACCTGTCGCGTGTTCGTAACGTTCAGCCAAAAATCTATAACCACGGTAGAACTCTTC AACCAGAGAAATCAATTCTGGCCTCTTCTGGTAATACATCTCAGCTTTTTGGGCAAATGAATCTCCATCATCTTCAATCA GCTTCAACATTTGCCTCACGTTACGGTCCATCTCAAAGGTTATAGATCGTTTTGTCAATTTCTTCATTGTGATGAAAAAA GGTTATTGCCTGTGAATTACTTTTGAATAGAAGAAATGAAAAGAAAATAATCACCTTTCCCAACTTTTGCAAAGTTGGGA ATGGTTAATCCTTTTCCCAGTATATTGATTCAAGGATGAGACAAGATGTTGTTAACAACTTTTTATGTTTTGTTTTGAAA GGATTGTTGATAACTTAATATAACACCAGTGTTAATTTGTTTACTTGTTTTAACCTTTCCTTGTTTAGAACGTGGAACTA CCCATAATTTTGTTGACTGAAGCTACAATTGCCGTTAAG
CDS sequence (LotjaGi6g1v0044300.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCGTATGTGCCTCCACACCTGAGAAGCGCGACCTCAACCACCGTCGCCACCACCACCAGACCCTCCTCCTCCGCAAC CCTAGACAACCACCACCACACCAAGCTCGCATTCTCCTCCTCACACTCCAACAACAACAACAACAACTCGTCCCTCTCCA ATGGCCCTCGCCGCACCTCCGCCCTCCCTGATCCTCTCTTCCCTCTCTGGCAACCCTCCGAACGCGTTTCCCGCATGAAT CCCCAGCAGATTGAAGAGGTCCGCATACGGCTTAATCTTGATGTTACTGCTCCATCTGGCTCTCCTGATGCTCCTACACC TATAGAAACGTTTACTGATATGTGTTTGCACCCAAGTATCATGAAGGATATTGCTTATCACGAATACACCAGACCAACTT CTATTCAGGCACAGGCCATGCCGATTGCTCTTAGCGGAAGGGATCTGCTTGGTTGTGCTGAAACTGGTAGCGGGAAGACT GCAGCTTTCACAATTCCTATGATACAGCATTGCTTGGCCCAACCTCCAATTCGGCGCGGTGATGGTCCCCTGGCATTAGT TTTGGCTCCTACAAGAGAACTTGCTCAACAAATAGAAAAAGAGGTTAAAGCTTTCAGCAGATCTCTTGAGTCATTTAAAA CTGCTATAGTTGTTGGTGGAACTAACATTGAAAAGCAGAGGTCTGAACTAAGAGCAGGAGTTGAAATTGTGGTTGCCACT CCTGGAAGATTTATTGACCACTTACAACAAGGCAACACTTCCCTCTCGAGAATTTCTTTTGTTGTTCTCGATGAGGCCGA TAGAATGCTTGATATGGGTTTTGAACCACAGATCAGAGAGATAATGAGAAATCTTCCAGAGAAGCATCAAACACTGCTGT TTAGTGCGACTATGCCTGTTGAGATTGAAGAATTATCGAAGGAGTACTTAACCAGTCCTGTCCAAGTTAAGGTGGGAAAA GTCAGTAGCCCAACAACTAATGTTTCGCAAAACCTTGTGAAGGTTTCTGAAAATGAAAAGATTGATAGGCTTCTAGGTTT GCTTGTAGAGGAGGCATCACAGGCTGAAAAGTGTGGTCATCCATTCCCATTAACAATTGTGTTTGTTGAGAGAAAGACAA GGTGTGATGATGTTTCTGAAGCATTGGTAGCTCAAGGATTATCTGCTGTTTCTCTTCATGGTGGTCGCACTCAGAGTGAA AGAGAGGCTGCCTTGCGTGATTTTCGGAGTGGCTCTACCAGCATTTTGGTTGCCACTGATGTTGCATCTCGTGGACTGGA TGTCACAGGAGTATCACATGTCATCAATCTAGATCTTCCAAAGACCATGGAAGATTATGTACACCGGATTGGAAGGACGG GGCGTGCAGGATCAACCGGCCTATCTACCTCATTTTATACTGATCGTGACATGTTCCTTGTGGCAAATATAAAGAAAGCA ATAGCTGATGCTGAATCTGGAAATACTGTGGCATTTGCAACTGGAAAGGTTGCTAGAAGAAAGGAGAAAGAAGCAGCAGC TGCACAAAGAGAGGCAAATATTGTTTTATCCAAACACATTGGATCGGGAGCTGCTTCAGTTAACATTGAAGATAAGTTCA AATTTATGATGACTGCCTCAAACATTAAAGGAGACGGAGCAGCAGATAGTGCCTGGGATGATTAA
Protein sequence (LotjaGi6g1v0044300.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSYVPPHLRSATSTTVATTTRPSSSATLDNHHHTKLAFSSSHSNNNNNNSSLSNGPRRTSALPDPLFPLWQPSERVSRMN PQQIEEVRIRLNLDVTAPSGSPDAPTPIETFTDMCLHPSIMKDIAYHEYTRPTSIQAQAMPIALSGRDLLGCAETGSGKT AAFTIPMIQHCLAQPPIRRGDGPLALVLAPTRELAQQIEKEVKAFSRSLESFKTAIVVGGTNIEKQRSELRAGVEIVVAT PGRFIDHLQQGNTSLSRISFVVLDEADRMLDMGFEPQIREIMRNLPEKHQTLLFSATMPVEIEELSKEYLTSPVQVKVGK VSSPTTNVSQNLVKVSENEKIDRLLGLLVEEASQAEKCGHPFPLTIVFVERKTRCDDVSEALVAQGLSAVSLHGGRTQSE REAALRDFRSGSTSILVATDVASRGLDVTGVSHVINLDLPKTMEDYVHRIGRTGRAGSTGLSTSFYTDRDMFLVANIKKA IADAESGNTVAFATGKVARRKEKEAAAAQREANIVLSKHIGSGAASVNIEDKFKFMMTASNIKGDGAADSAWDD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 66 | 66 | - | – | |
| MobiDBLite | 1 | 58 | 58 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 25 | 25 | - | – | |
| Gene3D | 70 | 320 | 251 | 1.1E-85 | – | |
| PANTHER | 102 | 481 | 380 | 3.3E-129 | – | |
| PANTHER | 102 | 481 | 380 | 3.3E-129 | – | |
| ProSiteProfiles | 109 | 137 | 29 | 10.097 | ||
| CDD | 120 | 317 | 198 | 1.19115E-100 | – | |
| SMART | 128 | 331 | 204 | 3.0E-66 | ||
| Pfam | 133 | 304 | 172 | 2.9E-54 | ||
| ProSiteProfiles | 140 | 316 | 177 | 34.848 | ||
| SUPERFAMILY | 181 | 476 | 296 | 9.52E-74 | ||
| ProSitePatterns | 262 | 270 | 9 | - | ||
| Gene3D | 322 | 516 | 195 | 9.2E-51 | – | |
| CDD | 328 | 466 | 139 | 1.92257E-58 | – | |
| ProSiteProfiles | 340 | 498 | 159 | 22.489 | ||
| Pfam | 359 | 457 | 99 | 2.3E-29 | ||
| SMART | 376 | 457 | 82 | 2.3E-34 | ||
| Coils | 498 | 518 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleic acid binding | Interacting selectively and non-covalently with any nucleic acid. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. |
Expression pattern of LotjaGi6g1v0044300.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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