Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR011545
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

Export options

Download the entire search result as a CSV file.

We have found 320 results. Now displaying 1 of 7 with 50 rows per page. This search has taken 6.713s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0050249.1
n.a. PREDICTED: DEAD-box ATP-dependent RNA helicase 27-like [Glycine max] gi|356563121|ref|XP_003549814.1| chr0 17066995 17071627 -
2 domain predictions
2 GO terms
Lj0g3v0054419.1
n.a. PREDICTED: Werner syndrome ATP-dependent helicase-like isoform X1 [Cicer arietinum] gi|502129734|ref|XP_004500407.1| chr0 17451173 17455169 -
2 domain predictions
2 GO terms
Lj0g3v0055059.1
n.a. PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like [Glycine max] gi|356572874|ref|XP_003554590.1| chr0 17701136 17705897 +
2 domain predictions
2 GO terms
Lj0g3v0055519.1
n.a. PREDICTED: DEAD-box ATP-dependent RNA helicase 50-like [Glycine max] gi|356507351|ref|XP_003522431.1| chr0 17935595 17940819 -
2 domain predictions
2 GO terms
Lj0g3v0060759.1
n.a. PREDICTED: DEAD-box ATP-dependent RNA helicase 20-like isoform X2 [Cicer arietinum] gi|502081287|ref|XP_004486821.1| chr0 20260185 20264457 +
2 domain predictions
2 GO terms
Lj0g3v0077789.1
n.a. PREDICTED: DNA polymerase theta-like [Glycine max] gi|356554501|ref|XP_003545584.1| chr0 29901195 29907311 -
2 domain predictions
2 GO terms
Lj0g3v0084329.1
n.a. PREDICTED: ATP-dependent DNA helicase RecG-like isoform X3 [Cicer arietinum] gi|502123899|ref|XP_004498303.1| chr0 33482812 33490207 -
2 domain predictions
2 GO terms
Lj0g3v0093619.1
n.a. PREDICTED: DEAD-box ATP-dependent RNA helicase 41-like [Cicer arietinum] gi|502092702|ref|XP_004489746.1| chr0 39254538 39257193 +
2 domain predictions
2 GO terms
Lj0g3v0110109.1
n.a. PREDICTED: DEAD-box ATP-dependent RNA helicase 39-like [Glycine max] gi|356499257|ref|XP_003518458.1| chr0 47752139 47762218 -
2 domain predictions
2 GO terms
Lj0g3v0125239.1
n.a. PREDICTED: DEAD-box ATP-dependent RNA helicase 28-like [Vitis vinifera] gi|225457931|ref|XP_002273443.1| chr0 56205455 56207107 -
2 domain predictions
2 GO terms
Lj0g3v0126049.1
n.a. PREDICTED: probable DEAD-box ATP-dependent RNA helicase 48-like [Cicer arietinum] gi|502139411|ref|XP_004503757.1| chr0 56681371 56685755 -
2 domain predictions
2 GO terms
Lj0g3v0190499.1
n.a. PREDICTED: DEAD-box ATP-dependent RNA helicase 28-like [Cicer arietinum] gi|502128963|ref|XP_004500137.1| chr0 93121919 93127115 -
2 domain predictions
2 GO terms
Lj0g3v0195829.1
n.a. PREDICTED: ATP-dependent RNA helicase DHX29-like isoform X1 [Cicer arietinum] gi|502126630|ref|XP_004499378.1| chr0 95538193 95543632 -
2 domain predictions
2 GO terms
Lj0g3v0195839.1
n.a. PREDICTED: ATP-dependent RNA helicase DHX29-like isoform X1 [Cicer arietinum] gi|502126630|ref|XP_004499378.1| chr0 95538874 95543632 -
2 domain predictions
2 GO terms
Lj0g3v0209329.1
n.a. PREDICTED: DEAD-box ATP-dependent RNA helicase 56-like [Glycine max] gi|356519355|ref|XP_003528338.1| chr0 104933873 104939786 -
2 domain predictions
2 GO terms
Lj0g3v0210949.1
n.a. PREDICTED: probable ATP-dependent RNA helicase DHR1-like [Glycine max] gi|356506353|ref|XP_003521949.1| chr0 106172230 106176681 +
2 domain predictions
2 GO terms
Lj0g3v0238469.1
n.a. Pre-mRNA splicing factor ATP-dependent RNA helicase-like protein [Medicago truncatula] gi|357463271|ref|XP_003601917.1| chr0 123745271 123748239 +
2 domain predictions
2 GO terms
Lj0g3v0241739.1
n.a. PREDICTED: DEAD-box ATP-dependent RNA helicase 7-like [Glycine max] gi|356535937|ref|XP_003536498.1| chr0 125463002 125465782 -
2 domain predictions
2 GO terms
Lj0g3v0244469.1
n.a. PREDICTED: DEAD-box ATP-dependent RNA helicase 31-like [Glycine max] gi|356560282|ref|XP_003548422.1| chr0 126844680 126846609 -
2 domain predictions
2 GO terms
Lj0g3v0245039.1
n.a. PREDICTED: DEAD-box ATP-dependent RNA helicase 7-like [Cicer arietinum] gi|502146038|ref|XP_004506292.1| chr0 127049994 127053584 -
2 domain predictions
2 GO terms
Lj0g3v0245039.2
n.a. PREDICTED: DEAD-box ATP-dependent RNA helicase 7-like [Glycine max] gi|356535937|ref|XP_003536498.1| chr0 127051758 127054753 -
2 domain predictions
2 GO terms
Lj0g3v0245489.1
n.a. PREDICTED: DEAD-box ATP-dependent RNA helicase 22-like [Glycine max] gi|356570099|ref|XP_003553228.1| chr0 127245878 127248388 +
2 domain predictions
2 GO terms
Lj0g3v0246069.1
n.a. Dead box ATP-dependent RNA helicase isoform 2 [Theobroma cacao] gi|508724625|gb|EOY16522.1| chr0 127445886 127452228 -
2 domain predictions
2 GO terms
Lj0g3v0250239.1
n.a. PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA helicase-like [Fragaria vesca subsp]. vesca] gi|470142342|ref|XP_004306870.1| chr0 129717504 129724134 -
2 domain predictions
2 GO terms
Lj0g3v0258839.1
n.a. PREDICTED: DEAD-box ATP-dependent RNA helicase 10-like [Glycine max] gi|356504849|ref|XP_003521207.1| chr0 134391357 134397770 -
2 domain predictions
2 GO terms
Lj0g3v0265449.1
n.a. PREDICTED: DEAD-box ATP-dependent RNA helicase 39-like [Glycine max] gi|356502333|ref|XP_003519974.1| chr0 137540343 137542930 -
2 domain predictions
2 GO terms
Lj0g3v0271549.1
n.a. Pre-mRNA splicing factor ATP-dependent RNA helicase-like protein [Medicago truncatula] gi|357463271|ref|XP_003601917.1| chr0 140673021 140679894 -
2 domain predictions
2 GO terms
Lj0g3v0273279.1
n.a. PREDICTED: DEAD-box ATP-dependent RNA helicase 8-like [Glycine max] gi|356520426|ref|XP_003528863.1| chr0 141625346 141640119 +
2 domain predictions
2 GO terms
Lj0g3v0297599.1
n.a. PREDICTED: pre-mRNA-processing ATP-dependent RNA helicase prp5-like [Glycine max] gi|356500419|ref|XP_003519029.1| chr0 154707796 154722146 +
2 domain predictions
2 GO terms
Lj0g3v0298949.1
n.a. PREDICTED: DEAD-box ATP-dependent RNA helicase 32-like [Glycine max] gi|356501519|ref|XP_003519572.1| chr0 155380623 155387217 +
2 domain predictions
2 GO terms
Lj0g3v0326409.1
n.a. PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Glycine max] gi|356533151|ref|XP_003535131.1| chr0 170633599 170648023 -
2 domain predictions
2 GO terms
Lj0g3v0345299.1
n.a. PREDICTED: endoribonuclease Dicer homolog 3a-like [Glycine max] gi|356509849|ref|XP_003523657.1| chr0 181163779 181168747 -
2 domain predictions
2 GO terms
Lj0g3v0354659.1
n.a. PREDICTED: activating signal cointegrator 1 complex subunit 3 [Glycine max] gi|356516857|ref|XP_003527109.1| chr0 186796725 186819693 -
2 domain predictions
2 GO terms
Lj0g3v0354659.2
n.a. PREDICTED: activating signal cointegrator 1 complex subunit 3 [Glycine max] gi|356516857|ref|XP_003527109.1| chr0 186796725 186827230 -
2 domain predictions
2 GO terms
Lj0g3v0354659.3
n.a. PREDICTED: activating signal cointegrator 1 complex subunit 3 [Glycine max] gi|356516857|ref|XP_003527109.1| chr0 186802567 186827230 -
2 domain predictions
2 GO terms
Lj0g3v0354659.4
n.a. PREDICTED: activating signal cointegrator 1 complex subunit 3 [Glycine max] gi|356516857|ref|XP_003527109.1| chr0 186819578 186827230 -
2 domain predictions
2 GO terms
Lj0g3v0361239.1
n.a. PREDICTED: DEAD-box ATP-dependent RNA helicase 42-like isoform X1 [Cicer arietinum] gi|502076924|ref|XP_004485495.1| chr0 190278308 190283531 -
2 domain predictions
2 GO terms
Lj1g3v1911750.1
n.a. PREDICTED: DEAD-box ATP-dependent RNA helicase 56-like [Glycine max] gi|356507736|ref|XP_003522620.1| chr1 22694596 22700809 +
2 domain predictions
2 GO terms
Lj1g3v2628740.1
n.a. PREDICTED: DEAD-box ATP-dependent RNA helicase 8-like [Fragaria vesca subsp]. vesca] gi|470142207|ref|XP_004306806.1| chr1 30744419 30753054 -
2 domain predictions
2 GO terms
Lj1g3v3022240.1
n.a. PREDICTED: DEAD-box ATP-dependent RNA helicase 51-like [Cicer arietinum] gi|502086882|ref|XP_004488356.1| chr1 34325854 34332933 -
2 domain predictions
2 GO terms
Lj1g3v3329390.1
n.a. PREDICTED: superkiller viralicidic activity 2-like 2-like [Glycine max] gi|356527455|ref|XP_003532326.1| chr1 37641867 37652700 +
2 domain predictions
2 GO terms
Lj1g3v3930430.1
n.a. PREDICTED: transcription-repair-coupling factor-like [Cicer arietinum] gi|502106943|ref|XP_004493106.1| chr1 45895969 45907657 +
2 domain predictions
2 GO terms
Lj1g3v4579160.1
n.a. PREDICTED: DEAD-box ATP-dependent RNA helicase 57-like [Cicer arietinum] gi|502111093|ref|XP_004493954.1| chr1 54496843 54502619 -
2 domain predictions
2 GO terms
Lj1g3v4657810.1
n.a. PREDICTED: DEAD-box ATP-dependent RNA helicase 7-like [Glycine max] gi|356535937|ref|XP_003536498.1| chr1 55282481 55288872 +
2 domain predictions
2 GO terms
Lj1g3v4819930.1
n.a. PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like [Glycine max] gi|356505715|ref|XP_003521635.1| chr1 58122222 58128209 +
2 domain predictions
2 GO terms
Lj1g3v4848440.1
n.a. DEAD-box ATP-dependent RNA helicase [Medicago truncatula] gi|357511395|ref|XP_003625986.1| chr1 58700838 58704576 -
2 domain predictions
2 GO terms
Lj2g3v0780560.1
n.a. PREDICTED: DEAD-box ATP-dependent RNA helicase 35-like [Glycine max] gi|356505847|ref|XP_003521701.1| chr2 12477348 12480299 -
2 domain predictions
2 GO terms
Lj2g3v1365820.1
n.a. PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2, chloroplastic-like [Cicer arietinum] gi|502182992|ref|XP_004517036.1| chr2 21415162 21420994 +
2 domain predictions
2 GO terms
Lj2g3v1451720.1
n.a. PREDICTED: DEAD-box ATP-dependent RNA helicase 46-like [Glycine max] gi|356511678|ref|XP_003524550.1| chr2 22818599 22823838 -
2 domain predictions
2 GO terms
Lj2g3v1536140.1
n.a. PREDICTED: DEAD-box ATP-dependent RNA helicase 5-like [Glycine max] gi|356531475|ref|XP_003534303.1| chr2 24097685 24102789 -
2 domain predictions
2 GO terms