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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0092300 |
| Transcript ID | LotjaGi6g1v0092300.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Ribosomal RNA small subunit methyltransferase F; TAIR: AT2G22400.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; Swiss-Prot: sp|Q5ZLV4|NSUN2_CHICK tRNA (cytosine(34)-C(5))-methyltransferase; TrEMBL-Plants: tr|I1LNJ4|I1LNJ4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0092300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:19941345..19949620) extracted from Lotus japonicus Gifu genome v1.2.
AAACAAGTGCAGTGAAGTGAAGTGCGACTCATTTTAGCACCGAACCAGTCCAGTGCAGTGAAGTGCGTGCGGCAATTGCG CTCTGAAACTGGAACGCCACCATGGGTGGAGGAAAAGGAAAAGACCCTACCTGCTCCACTTTGGCTATTCAAAACCCTGC TTTCGATCACTATTACAAGGCAAGATTGAATAACAACGTCTATTTCTTATCCAATAAATATCATTTCTCTTTGCTCATTT CAGAGTCATTTTCTTTTCACCAGGAACAGAACATCGTGTCCCCAGAAGAATGGGATTCATTCATGCAAGTTCTCACTACT CCATTGCCCGCAGCATTTAGAATCAATTCCTGGTTTGTTTTTATTTCTTCACTCTATCGATTCCTCACCTAGTTAATACA ATTGTGTAGAAATAACACTAACTTACTAATGAAATAAAGTACATATTAGAAAATTAAACAATAATTTTAGATATCAATGT TTCTTGTCACAACCTTGTAGCACTTGAAAACAAACTGAGCCAGTGTAAATTCAAATATGGATAGTAATACTATTCAACTT CAATTAATCCACATTCATTCATCCAATATGCATTGATTCATTGTTGATTTTTTTTGTTTGTTTGATGATTCCAGCAGCCG GTCTTCCGCAGATGTCCGGTCTCAACTGGAGAATGACTTTGTACAGTCTCTTCAGGCCAAGGTAAGTCACTAATAGCAAT GCTGGTAAATTAATCATGCTGCTGCATTTTTTAGGTGCTGAATTGTTATATATAGGTTGTTGAAGAGGATAGTCATACAG AGGCACTTAAACCGTTGCCATGGTATCCTGATAATCTTGCTTGGCATTCAAATTTTTCCCGTATGCAGCTCAGGAAGAAT CGAACACTTCGAAGGTAAATACGTTATGATATACGGGTGTGTCTGAATTCATAGCATGAATTGTACCTATGGAGTTTCGC ATTGGATATGTAGTTGTAAGTTTCTATCAGTCCAAACAGTTTATATAGATGCATTATGATTTTACTTTTGGTCATTACCG TTTTCTTACTTTGATGGTCTTTGCTTATGACTGTAGTAGGATTGGTAGGTGCATTTAATTATTTCAGAATGCATGATTCT TTCCTACTACTAATTGAAATTGATTATCTATATAAGTTAGTTCTTCTAACTAATGTTTCAATTCCTGCTTCTTATTATGT TAATCTCTCAGGTTTCATGAATTCTTAAAGCTAGAAAATGAACTTGGGAATATTACGAGACAGGAAGCTGTCAGCATGGT GGGCGAGTTTACATACTGTCTGACACTCGTCATGATCATACAGGATCATTTGCTTTTGTTTTGGAAATGTGTACGGTTTA GTGCATGTAGATTAGTTTACACTCTTTCAAGAAATTAATTGGTGCAGACAAATGTTTGTTTGCAATACAGGTGCCTCCTA TGTTCTTGGATGTACATTCAAATCATTTTGTTCTTGATAGTAAGCAACTTACGCTGCACCAAAATACTTTTTCTCATTAT CGATTGATCTTTTCCTATTTTGGTTATTAGGAATGCTGATTTCAGTGTTCTAACTACTTTGCTTTTACATTGCTTCTATT CAGTGTGTGCGGCACCAGGTTCAAAAACATTTCAATTGCTTGAGATTTTACACCAATCATCTAAAGCTGGATCACTTCCT GATGGAATGGTTTGTGTCTCTATCATTATGTAATGTTATTTTCCAGACTAAATATTTTTCTGATTATGACCTGTCCTCAT CAGGCTTCATTTGCAAAATTTATTGACTAGTCTTTGTTTGATAATTAGGTTATAGCTAATGATCTAGATGTCCAGAGATG TAATCTTCTCATATACCAAACAAAAAGAATGTGCACAGCCAACCTAATCGTCACTAATCATGAAGCTCAGCATTTCCCAG GATGTCATTTAAACATGCATGATGGTACAATGGAGGCTGATGAACATATCACCCAACTGTTATTTGATCGTATTCTGTGT GATGTACCATGCAGTGGAGACGGTACATTTCGTAAGGCACCTAAGCTCTTGAATAAATGGTATTCCTTCCATCACCACAT TCCTTTCCTTTTTCACTTTTAATCTATTCTATTCAGAACCTAAGCCTAATATTGCTTTTATGCAGGAACACAGGGACAGG AAATGGGCTTCATAACCTACAAATCATTATTGCCATGCGAGGTACGTTTCGATTGTTGCCTACCTGCTCTTGGGGAATGG GGATTGGGGACTGACTTTTTTAGGCTTGATTTGATTTCTCTTTTAATATGTTATTAATGCAAGACAATGAGTTGACTGAA TCTTAGTTTTTAGTTTATTTGGTAAGGAAGTTGTATCATGCTGTTAAGAATGCTGTCATTTGGTTAAACGAAAATTCAGT TATTTTTTAATTATGATAATGAAAATAGACTTCAGTTTATTGGAGAGGGAAGTCATATTGATGATGAAAAGCATTCTTAG CACCAAGGAATCGAACCATAGTGATATATTGATCAAACCCTTGAATTGTTCATTTCTCTTAAGATCTTTTTAATGTTTAT TTTTAGTTTTACACACGCCTATTTTTGGGCGACCGACATCCATTATGTGGCATAGGATTACATCCTGTATAAAATTTAAT AATATACTGCTTCTACGAATAACTAATTCTGCATCTCTTTTGAGACGGGGACCTTTTATCATGATGTCTGCTCATCATAT TGTATTTTTTTAGTGTAAATTGGCTGCCTCTTGTGATTTGATTCTAAAATTTATAAAGATGGTACTGGCCTACTAAGATC AAAGTCCTGCTATTTATCATCTTAATATATATGAACTAGGGTTAGTGTGACTGTGACTTGACTGGTAGCATTATTTTAGC AAATTCAGCTGCCTTTTTTTAATTTTCTCAGGTGTATCCTTACTTAAAGTTGGTGGAAGAATGGTTTACTCAACCTGCTC AATGAATCCTATTGAGAATGAAGCTGTCGTTGCAGAGGTAATCAGCCTTGAATGCTCTACAGTATATGGTTCCTAGCCAT CCTAAGTAGTCTTTCCGTTGTAGGCTTTGTAAATGAAGAGTTTTGCTTTCTTAAAATCAAGTAAATAACTCATGTATTGT CATATGAATTTGTTGCCTCCGTTGATGAAGTCCCTCACCCTCCAAATTCTATATTTTGAAATATCAGATCTCAATTGCCT ATGTTAGATATCTGGCTGGTAACATTTTTTTATGAAACATGGGCTTTGATTTGAAGAAAGTATTTGACATCAAATTATAT TTTAATAGAAGATAATTAATGGAATAATATGGTTTTGGACTAGTAACTTATCGATAGTTCAATTCATTACTGGCACTAAT TGATGGATAACAGTTCTGGAGCAAATTATCAATGATCAAATTCATTACTTGGACAATCTTATCCTACATTTGACTTCCTA CTTCTGTTATTAATATAATTTTCCATTCGTCATTTTACGTTGCCTATAATAAGATCTTCTTTCTAAAGAGATTCGATTCG GAACTATGATATGTCCAAGGTCCAATATTGAAAGAATTTCAGAGGTTTTCCTTGACTTTGTCCCAAGTTTTCTGTGGTGG TGTGAACATGAGATTACAAAGGCCAAATTCCACAAGATATTACTGCTTTATAATTAGTATAAAGCATACAATGAGTTTTC TTCCATAAATTAAAAAGATGCTTTCAAGTTTATGTTTATTTTTTTAGTAATTTATAAGGAGAGGAGCTGGCTTAATTCAT TCCCCCTACCTTACTTTTCTAATCAATTGCAGGTTTTGCGGAGGTGTAGAGGGTCTCTGGAACTTGTTGATGTCTCTAGT GAACTTCCACAACTTGTTCGTCGACCAGGTCTTAAGAGATGGAAGGTTTATGTTTCTTGTGACCATGTGTCTTGAGTTGC AGAGTTTTGAAGATAATACATGTAATGTCAAGAAACAGATATCTAGGTTGGCTTACACATGGCAAAGTTTAGCATGTTTG TCATCTTTCGGGAATATTGGGGGGGGGGGGATGCACTCATTACTCGTAAATGAATTCTTTCAATTTTCATACACGTGTCA ACTGGAAGGGTTTTAAAGGAAAGTTGTGAGTTAGGGTGTCTATTTTTCAGCATTCTCCCTCTGAAAGGTTTAAATTCAAT ATATTCCCATACAGTAGCTGTAGGCTGTAAAACTAGTTCAGCTCAGCTCACCAGTTATATCTCTTACAACACTTCATTGC TTGGTTGATGTGTTTGTTTCTTCATTAAAAAGTATTATTCGTTTCCAATTGATGGACTAGGACTGTTAGTTTTCTGATTG GCTTATTGTTCTTAACTGTGTCTTGCTTGTTGATTCTTTCTAATTGGACCATTTGGATTTCCATCAAGTTATTTCCATGT GCATGGGAAATTGGGAATACATTGAATTTTAACCTTTCAGAACAGAAAATTCTTATGTTTATTGAGCTTGAATGTTTACT TCCACCAAAAGTAGTTGGATTATGTATGTAATCAAGCTCTTGTCTTCAAATCTAGAATACTAGAACAGGTAAAATGTTTG TTATGCAGCTGTACATCTGAATGTATGATTTTGGAGATGCAGGTATTTGACAAGGGCATGTCATATGTCTCTTGCAAAGA TGTTCCCAAGTTTCGTAGAAGTATAGTTCTTCCCAGCATGTTTCCGAATGGTGGAAGCTACCAAGATGTTGTTAAAAGTA ACAGTAACTGTAATATCAGCATTGGAGATGAAATTGCTGATGATGTTAATGGAAATTCTGATGATGGTGTTCAAGAAGCG GAGAATCCCGTGATGCACGATATCACTGAGGTTTCTGCTTTGCCACTAGACCGATGTGTGAGGTTAGTGCCTCATGATCA GAACACTGGAGCATTTTTTATTGCTGTATTGCAAAAGGTTTCTCCTCTGCCAGGTAATTTCTCATATGATTTGTGTTGTT TTTTCTCTCTCTCCGAAATCCTAATAAAGAGAATTAAGGAATTTGATAAACACTGGGAATAACTCCTTCAAGATGCCATT TTTAAACTATCTACATTATTTATGTATGTTGTGAGACATGCCTTTGCTTGCCACTATTGGCTTGTGATTATTTCCTCTTT GCAGTGATTCAGGTAAAAACTAGAAAAGACGCTGATAATCGACATGTAGATTCAGCAGACCAGGGAAATGAGGATGCACA AGTATTGCAGATCAATCCATCAGAAAGTACACATGAAAATGTTTCAGAGACTAATACAAATGACAATGAACCCGATTCAG CAGATTTGAAAGTTACTCCTGTTATATGTGAAGATGGGGATTCCAACGAAGCCCAAGAGCCCCTCAATGTAGAAAATATA GCAAAGATCACTCCAGGAAAAAGAAAGCTGCAGATGCAAGACAGATGGAGAGGCATTGACCCTGTTGTCTTCTTCAAAGA TGAAGTAGTTATTAACAGCATTAAGGCATTTTACGGGATTGACGAGCAGTTCCCATTCGATGGTCACCTTGTAGCAAGAA ATGGTGATACTAGCCGTGTCAAAAGGATCTACTATGTCTCCAAGTCAGTCAAGAATGTTCTTGAGTTGAACTTCTCTGTT GGGCAGCAATTTAAAATAGCTTCCGTTGGCCTAAAGATTTTTGTAAGTCTACTTTACTCTGAATTCAGAATTGTTGTTTT TGTTACTATGATAATTTAACATTTTTTGACACGCCTTACTTAAATTCACGATCTCAACAAACTATTTTATTACTCAAGTG CAAATTTTTAAGAATAAAATTTAATACTCAATGACACACAATTACCCAAATCCCAATCAGCCAGAGAATTAGAGTTTTTA TGGTGAAGAAACTCAAACTAATTCTTCATATTTATGAAGTAAATTCCATAAATAAAAATTTACTTCAAGAGGTTAAAAAT TAGGCTCAATTGTACTTTCAGTTGAGCAAATGTAATCCCTTATATATAGCACTATCCTTTTCCATAACTCAATTTCTACT GAAAATCTTCACAAATTAAATAGATTATACTAGTTTAAGTCTTTCCACTCAAAATTCACCATTAAAAGACATGAATCCTT TTGATGTCCAATTACAACTCAAACTTCCGTTTTGTTTTAAAACCTTCCACTCAAAATTCACCACTCTTCACCAACGGTTT TGATGTCCAATCTCCGACTCGCCCAATACCCAATTTCGATCTTCCACTTCCTGCACCAGTTTCATCAACGTTCCTATGTC TCCCGAACTATGTAGTTGGACTTCTGCTGGTATTTCATCGGATAACCTTAACATCTTGAGCACCTCTTGTTACCATGTCA AAGATGAGCCCCCAAGACTCAAACTCATCAGAACTTCATATGGTGTTCTGTGACAGAGATTTGAAATTGACCCAGAAATG CTCGCTTGAAGATCACCCTAACACCAATTTTTGCATAATCCACCTCGCTCTTTGCCCTCTTTTTTGTTATCCTGATCTGA ATGCCTCCTGTCACATTCAGTTGTGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGCTAACAGCAT TCCCATTCCACCCATTTCAACTATCCTCATCATTCCCCACATTCCTCTCATTAACCACTTAAATATGATTGCCTTGGGGC CCTGTTTCCCTCGTTGCCTATATACATGAATTATAGGCTATCAGTACCCATGACTCTGTTAGTTAGTTGTTTCTATTTCT GCTTTCCTCGACTTAATTTGAAATACATTTTGACTTTTATCGGATATGAAAAACAGAATCAGCTATGCTGCATGATTTCA TTTTGACATGATTATTGGTAGAGTATAGACTATAGAATATTTACTGTAATATGTTGTCAGATTTGGCTTCTAAGAGGTGC ATTTTTTAGAATACAAGGATAACCGCTTACTGAAAGAAAAACAGTTAAGATTATGATTATATATATATAATAAATTAAGT TTTTTAAATCTTAACTTATTGATTTTTATACCAACGGGATAATAATTTTGCACCTTATTCTCTATAATGCATTTCTCATT TTAGAGGAACTATATCATGTAATGTCAAAATAGTTTGTTTAGGTTTTTTTTGTAAAAAAATAAACCTAATTACTTCGCAA TAAAAGAAAGTATTGATCTGCCCTTGACTGACAGTGAGAAATAAGTTCTTTGATTAGTTGTTTTTGTGAATAACCACGTA ATGTGTACTATGTCCTTATCATTCAGGAAAGACACACATCACGTGAAGGTGCCTCTGCACCATGTCCTTTCCGGATCACT TCTGAAGGATTGCCCCTTATCCTCCCTCACGTCACCAAACAGATTCTGCGTGCATCTCCTATAGATTTCGAGCATCTTCT GCAGTATAAGACTGTAAAATTTGCAGATTTTGTTAATGCCAAGTTTGGTGAAAGGGTTGCAAACCTAATGCCAGGCTGTT GTTTGGTAGTTCTAGGTGAAGGTATGTATCACTACCACCTTGAGAGTTGAGAGTAAGAGTGTGTTTGTTTATCCATTGGA TTGGACGTGAATGTGTTTTTTCTCAATCCAACAACTTTGATCGGTTGGAAAGACTATCTTGGTAAGCCATATATATATAT ATATATATATATATATATATATATATATATCTGGAAAGCCAAACACACTCTTAATGCTCATTTGTTTTGACGGTTTACGT GGTAACCTCCTTTCTGCAGGGAACATAGCTGCTCCAGAGCCCCTCCAAGTGGATGAGTCAACAATAGGCATTGGCTGTTG GAAGGGGATGGCAAGTTTGACCGTGATGGTCACTGCAATAGAGTGCCAAGAACTGCTTGAAAGGCTTTTAATTCGTGCAA ACACTAACAGAATAGGACTCCTCATGCATGAGGACCAACCCTCTCATAATGTGGGAGATGAAGAACAGCAGTCGAATGCA AAACACGAAGATGTGGAAGCTGCTTGGTGATAAAATTGAATAGTTTAAACTCTTCAATAGAGATTAATCACTCATTTCTA CGTTGAGTAGTTAAACTACGTTTTAATCTTTTGTCATGGGCTCTTTTCCTTTATAGTCATGTCTTCTTAGTTCTTACACA AGCATTTACAGAAATTAAGGCTTTTGCTTCAGCCATGAAAATTGTTTACGATTTTGTTGCTTTTCTTTCCTTTTTTGTCA TGTTCTTTGTAGCAATGTGAACATCCTTCGGTAATAGAATAGTATTCTAATGCTACATTGCCCCTCAAAATTCTTACACT ACATCTAATTAGTCATTTGTTGATTTCAAGTATTGA
CDS sequence (LotjaGi6g1v0092300.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTGGAGGAAAAGGAAAAGACCCTACCTGCTCCACTTTGGCTATTCAAAACCCTGCTTTCGATCACTATTACAAGGA ACAGAACATCGTGTCCCCAGAAGAATGGGATTCATTCATGCAAGTTCTCACTACTCCATTGCCCGCAGCATTTAGAATCA ATTCCTGCAGCCGGTCTTCCGCAGATGTCCGGTCTCAACTGGAGAATGACTTTGTACAGTCTCTTCAGGCCAAGGTTGTT GAAGAGGATAGTCATACAGAGGCACTTAAACCGTTGCCATGGTATCCTGATAATCTTGCTTGGCATTCAAATTTTTCCCG TATGCAGCTCAGGAAGAATCGAACACTTCGAAGGTTTCATGAATTCTTAAAGCTAGAAAATGAACTTGGGAATATTACGA GACAGGAAGCTGTCAGCATGGTGCCTCCTATGTTCTTGGATGTACATTCAAATCATTTTGTTCTTGATATGTGTGCGGCA CCAGGTTCAAAAACATTTCAATTGCTTGAGATTTTACACCAATCATCTAAAGCTGGATCACTTCCTGATGGAATGGTTAT AGCTAATGATCTAGATGTCCAGAGATGTAATCTTCTCATATACCAAACAAAAAGAATGTGCACAGCCAACCTAATCGTCA CTAATCATGAAGCTCAGCATTTCCCAGGATGTCATTTAAACATGCATGATGGTACAATGGAGGCTGATGAACATATCACC CAACTGTTATTTGATCGTATTCTGTGTGATGTACCATGCAGTGGAGACGGTACATTTCGTAAGGCACCTAAGCTCTTGAA TAAATGGAACACAGGGACAGGAAATGGGCTTCATAACCTACAAATCATTATTGCCATGCGAGGTGTATCCTTACTTAAAG TTGGTGGAAGAATGGTTTACTCAACCTGCTCAATGAATCCTATTGAGAATGAAGCTGTCGTTGCAGAGGTTTTGCGGAGG TGTAGAGGGTCTCTGGAACTTGTTGATGTCTCTAGTGAACTTCCACAACTTGTTCGTCGACCAGGTCTTAAGAGATGGAA GGTATTTGACAAGGGCATGTCATATGTCTCTTGCAAAGATGTTCCCAAGTTTCGTAGAAGTATAGTTCTTCCCAGCATGT TTCCGAATGGTGGAAGCTACCAAGATGTTGTTAAAAGTAACAGTAACTGTAATATCAGCATTGGAGATGAAATTGCTGAT GATGTTAATGGAAATTCTGATGATGGTGTTCAAGAAGCGGAGAATCCCGTGATGCACGATATCACTGAGGTTTCTGCTTT GCCACTAGACCGATGTGTGAGGTTAGTGCCTCATGATCAGAACACTGGAGCATTTTTTATTGCTGTATTGCAAAAGGTTT CTCCTCTGCCAGTGATTCAGGTAAAAACTAGAAAAGACGCTGATAATCGACATGTAGATTCAGCAGACCAGGGAAATGAG GATGCACAAGTATTGCAGATCAATCCATCAGAAAGTACACATGAAAATGTTTCAGAGACTAATACAAATGACAATGAACC CGATTCAGCAGATTTGAAAGTTACTCCTGTTATATGTGAAGATGGGGATTCCAACGAAGCCCAAGAGCCCCTCAATGTAG AAAATATAGCAAAGATCACTCCAGGAAAAAGAAAGCTGCAGATGCAAGACAGATGGAGAGGCATTGACCCTGTTGTCTTC TTCAAAGATGAAGTAGTTATTAACAGCATTAAGGCATTTTACGGGATTGACGAGCAGTTCCCATTCGATGGTCACCTTGT AGCAAGAAATGGTGATACTAGCCGTGTCAAAAGGATCTACTATGTCTCCAAGTCAGTCAAGAATGTTCTTGAGTTGAACT TCTCTGTTGGGCAGCAATTTAAAATAGCTTCCGTTGGCCTAAAGATTTTTGAAAGACACACATCACGTGAAGGTGCCTCT GCACCATGTCCTTTCCGGATCACTTCTGAAGGATTGCCCCTTATCCTCCCTCACGTCACCAAACAGATTCTGCGTGCATC TCCTATAGATTTCGAGCATCTTCTGCAGTATAAGACTGTAAAATTTGCAGATTTTGTTAATGCCAAGTTTGGTGAAAGGG TTGCAAACCTAATGCCAGGCTGTTGTTTGGTAGTTCTAGGTGAAGGGAACATAGCTGCTCCAGAGCCCCTCCAAGTGGAT GAGTCAACAATAGGCATTGGCTGTTGGAAGGGGATGGCAAGTTTGACCGTGATGGTCACTGCAATAGAGTGCCAAGAACT GCTTGAAAGGCTTTTAATTCGTGCAAACACTAACAGAATAGGACTCCTCATGCATGAGGACCAACCCTCTCATAATGTGG GAGATGAAGAACAGCAGTCGAATGCAAAACACGAAGATGTGGAAGCTGCTTGGTGA
Protein sequence (LotjaGi6g1v0092300.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGGGKGKDPTCSTLAIQNPAFDHYYKEQNIVSPEEWDSFMQVLTTPLPAAFRINSCSRSSADVRSQLENDFVQSLQAKVV EEDSHTEALKPLPWYPDNLAWHSNFSRMQLRKNRTLRRFHEFLKLENELGNITRQEAVSMVPPMFLDVHSNHFVLDMCAA PGSKTFQLLEILHQSSKAGSLPDGMVIANDLDVQRCNLLIYQTKRMCTANLIVTNHEAQHFPGCHLNMHDGTMEADEHIT QLLFDRILCDVPCSGDGTFRKAPKLLNKWNTGTGNGLHNLQIIIAMRGVSLLKVGGRMVYSTCSMNPIENEAVVAEVLRR CRGSLELVDVSSELPQLVRRPGLKRWKVFDKGMSYVSCKDVPKFRRSIVLPSMFPNGGSYQDVVKSNSNCNISIGDEIAD DVNGNSDDGVQEAENPVMHDITEVSALPLDRCVRLVPHDQNTGAFFIAVLQKVSPLPVIQVKTRKDADNRHVDSADQGNE DAQVLQINPSESTHENVSETNTNDNEPDSADLKVTPVICEDGDSNEAQEPLNVENIAKITPGKRKLQMQDRWRGIDPVVF FKDEVVINSIKAFYGIDEQFPFDGHLVARNGDTSRVKRIYYVSKSVKNVLELNFSVGQQFKIASVGLKIFERHTSREGAS APCPFRITSEGLPLILPHVTKQILRASPIDFEHLLQYKTVKFADFVNAKFGERVANLMPGCCLVVLGEGNIAAPEPLQVD ESTIGIGCWKGMASLTVMVTAIECQELLERLLIRANTNRIGLLMHEDQPSHNVGDEEQQSNAKHEDVEAAW
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 8 | 778 | 771 | 0.0 | – | |
| PANTHER | 8 | 778 | 771 | 0.0 | – | |
| SUPERFAMILY | 25 | 453 | 429 | 2.0E-53 | ||
| ProSiteProfiles | 39 | 453 | 415 | 47.428 | ||
| PRINTS | 101 | 122 | 22 | 2.1E-13 | ||
| Pfam | 144 | 329 | 186 | 1.9E-32 | ||
| PRINTS | 155 | 165 | 11 | 7.6E-21 | ||
| ProSitePatterns | 244 | 255 | 12 | - | ||
| PRINTS | 245 | 257 | 13 | 7.6E-21 | ||
| PRINTS | 295 | 311 | 17 | 7.6E-21 | ||
| PRINTS | 329 | 348 | 20 | 2.1E-13 | ||
| PRINTS | 435 | 452 | 18 | 7.6E-21 | ||
| MobiDBLite | 464 | 511 | 48 | - | – | |
| MobiDBLite | 479 | 509 | 31 | - | – | |
| PRINTS | 620 | 632 | 13 | 2.1E-13 | ||
| MobiDBLite | 767 | 791 | 25 | - | – | |
| MobiDBLite | 769 | 791 | 23 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | RNA binding | Interacting selectively and non-covalently with an RNA molecule or a portion thereof. | ||
| Molecular function | Methyltransferase activity | Catalysis of the transfer of a methyl group to an acceptor molecule. | ||
| Molecular function | TRNA (cytosine-5-)-methyltransferase activity | Catalysis of the reaction: S-adenosyl-L-methionine + tRNA = S-adenosyl-L-homocysteine + tRNA containing 5-methylcytosine. |
Expression pattern of LotjaGi6g1v0092300.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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