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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0150600 |
| Transcript ID | LotjaGi6g1v0150600.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Ankyrin repeat-containing protein; TAIR: AT3G18670.2 Ankyrin repeat family protein; Swiss-Prot: sp|A2CIR5|NPR4_ORYSJ Ankyrin repeat-containing protein NPR4; TrEMBL-Plants: tr|V7BKQ9|V7BKQ9_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0150600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:42645429..42651377) extracted from Lotus japonicus Gifu genome v1.2.
AGAATGTTGAATACCGTGATTATAAAGCCTACAACTTCTACAAAATTAAAAGTGTCTTTTTAAAATTGAAAAATTAGTTT TAATTTTTTTAAAAATTTTGAAACATAAATCTAAAATACACCTTGAAGGGGACCTAAAATAAACCCACTTGAATTTTTTC AAAAGAAAAAATACTTATTTTCTTAAAAAAAAATTGTAATACAAGATCTACAACAAATTACAGCACTTTTTAATGTGAAG CCTTTCTGCTTTCAAGTGAGTAGAATTGCTTATTATGAAGAATCAGAAGCCAAAGCACCACTCTGAGGTACCCTATTGAT CGGTTCTCAACTCTTCGTATCTGCACATTAACGTTAACGCTCAAACTCAACGGTATGTATTGTTCCATTGATAAATCCTC ACATCTTAGAATTCATAGTGAAGCTAAATTCTTAGTTTCGTTGTTTCCTGATTCCCATTCATTTTTAAATGCACCCCACC TGTTTGATGAAATGCCTCATTGTTATCTTATTTTTGTTTTCATTTATTATTACAGTGACATTCATAATTATGATCATCAA TGTGTTAAGTTTATTGCCACTGAACTCAAACACACAATTTTGTATCACTGATCAATGGTGTCTTCTTTTGTGATAGGTGG TTTAGCAAATGGTGGTGTGTTTTCCATCAACACCAAAGAAACTGGCCATGACCATTGCGTGCTTCCTCTGTGGTGGTGCA GGTTTAGCTGTTGGGGCGCACCTCTCTTACGTCAATGTTGCTCCCCAGCGGGATCGAACCTTAGCTCGCGATGATTTTGT TAGAGAAACGTTGAGGAAGAAGTATGGTTACATTCCCCCGATGCAGGCTCGAAACATGGCTCGCAGTGATTCCACCAAAC AACAGTGAATGACTTTTGAGTTTTAAATCACTTCATCAAATGAAGAATAAATGCTTATTGCCTATGCTTTTCACCCTATT TATCAATGTTTATAGTTGTGCCCTTCTTGAGTTTCTGCAACTTTATAGTTGTGTACTCTTGATATCAAATGTGTGTATGG GTAGTGTATTTTAGAGATTATTATTATTGTTGTGAAATAGCTGCACTAATGTTGCAGACATCAACTCGATCAGATGAAGC CATTAGTTTGATTCCTTATGGATATGTCACCGTGGATAATTCATTAGTACTCACTCAATGAGATTCTGTTCTATTGAAGT AAAAAGGCTAGTAACTAACTTGAAAATAGGGATGTTAGGAGTTAGGACGGTTTAAAAGGAAAGACCAAATTTGAAACTAC TTGAGGAAGAAAAGTGCCACAACTAAATGAAGCCAGCTAGGGAAGTACATTGTAATGAGTATGACCATCATGCAGCAGAT AAACAATTGTTAGTACTGCACAATTGTACACTTCCAATTGAAATATAATTTGTCATCTTCAGCTTCTTATTTTCTTTCTG GTAAAGCATAGGATAGATATGGAGATATACAAAATATTGCAGTTCAAAATTAGGATTTCAAGTAATTTTGCATAGCCTAC AAAGAAAGCATCTCCAGCTCCTATATCTTGAAGAGTTTAATGAGTGTTCTTGTGTATATTTTCCTTCATCTTCTGCAGCT GCTCATGATTATCCATTGAATCAGATTTTAGCTTCCAAAACCAAGATAATTTTATTGTAGAAATGTCATTTGCAGGATGA TACATGTTACATGGTCTAAAATGAGGAAATGGGGTTGAATAAAATGAAGAATGTAAGAGGGGCATGCAATAACAGTGAGA AGGAGGAAGGAGGTTCAAAGAAGAAAGATGCAAGGAAACAACTTGAATAGAATTTCTGCAAACTCAATTAAGGTCTTCTA TATGTGTCAACAAAATCAAATTTCTATCCGGTCACTGTTTATGCCGATTATTTCGGATTCAAAATTTAGCCACAGTTAAA GCTCTTCATCCCTCCCCATGGGTGTACTCAGCTTGCGTTGCCAACTGAACTGATTCTCGTGAGTAAAATTAAATTTCTAT GCTATTAAATAACATGACAAGTAATTATATTGAAATAGAGGTGTTCTGAGGGTTAATAAACATAAAAGCCAAATTAGAAA CTTAATGAGGAAGGGTAACATGAGATGCATTGCTTTTACTTTTTTCTAGGCAAGTGCATTATTCTCACCAGTGAAAGGGA ATGAAAAGTTCAGCAATAGTGGAAACGAGAATCAGCACTGTGCTCCCCATGTCTTTAAAAAAGCAAAAAAAGGAATATTT AAGTTAATACTGCACAAATAACAATACACACAAAAATGTAAGAAAAGAAAAGAGAAAAAAAATGCAAAAATGTAGTGTTC TTTCCGTTTGAAGTATTACTCATCCTCCTCAGCTTGTTCTTATGTTCTTTCCATCAAAGGAAAGAAGAGTTTCAACTTTG CGTTGTGAACACGGAAAGCAAAGCATATACATGTCCAGCTCTTATAACTGGAACAGCTGAATGAGTGTTTTTGCATGTTT TCCTTCATCTTCTGCAGTGGTTGATTATCCATTGAAGCTTTCAAATTTGCAGAACAAATGTTACTAAAAGAATCAAGTTC ACTGATGCCTGACGATGATGTCAAGGCTGCTATTACTGAGTTTGGTATGTCATTTCCTATCCATTATTACAAAGAAAAAA GCATCATCTGCTTCAGTATATATAGGATTGTGCTCTATGATTCTTGTTTTTCTTAAGAAAAAGGGATTCTGAAACAAACC ATGGGATTCGTAGAAATAAAATGATTTCTAGATTGGGATAGTAGGCAGTAGGCTTCAAAATTTTGTGACTTTGCGGTCAC AGCTTCGAGTTGTGGAATCAGTCCATTGCAAAGCTTAGCAAGAGAATTTAAAGTCTAATCTCTTTTATTTTTGTGTAAAG CTTAGCACTTCTTGATTTAAGTTTGCTATAGATTATGACATATTCAAATGTACATACTTGATTCAGATTGAGATCACATG AGACATTTTTACTAAGTGCTGTTTTGCAAAGAAATGTTGTCTTTTCCATATTACAATTTCCCATTTCCATACAACTAATG TTGTTACTAACCATTGGCAAAAGCTAGGGGATTCAACCACAGTTACTACCAACCCCTGCACATAGCAATACTAAAAGGCG ATTGGAAATCTACAAAGGCTTTCCTTGATAGAGATCCAAGTGCATTGACAGCAAAGATTACCATGATTGGCAGGACTGCA CTTCATGTTGCGGCGCTCGGAGGTCAGTGGCGGCTTGTTGAGAAGCTGGTGCAACATGTGCCGGCACATTTACTTGGAGA ACTTGACTTGATGGGTTGTACTTGCCTACACTATGTTGCAATGGGTGAAAGCATAATGGCAGCCAAAGCATTGGTGGCTA AAAATCCTTCTCTGACACAAATTATAGATTTCAGAGGTTCCACACCACTCATCTATAGTATTACCTCTACCAGATGTAAG GAGATGGTGTGGTATCTTGTCTTGAACACTACAGATGAGAGACCTGGTTCTCCATTCTCTGGTCCTTCTGCTGGTCTGCT TGTGGCTTTGCTTACTGCTGCCGGATTGCATGGTAATCCAAATGCTTTGCTGAATAGTATATGCAACTATGCAAGTGCGT GTTTAGAAACTCGTTCGAAAATCACGGTGAAGCTAAATGGTGGACAGAAGCAAAAGATAAGTAAAGTTACTTATTTCTGT CCACCATGATGATTTTTTGTTTCACTGTGGTTTCCGAACGAGTTTCCAAACATCCAGCAAATGCTGAATAACTTAGCACT TAGAACAAGCTAATAACCATGTTTCTACCCCTTCAATATATCCTTTTATAACTTCTTTCTTTTTGGGGGGCTCTCCCATC ATCCTATGTACAGATATCACCATGTATCTTCTTCAGCAGTACCCTAACTTGGCCACTATTTCTGATTCAAATGGAAGCAC AGTGCTCAATGTATTGTCGAAACTGCCCTCGCATTTCCAAGGTGGAAATAAGCTTAGGTTTTGGGGGAAATGCCTTTACC ATTGTAAGTACCTTTTTCTATAGGCGTGATTCTTTTCTCCTACCATCCTTGATTGTAATCCTCTTCCACCATGTTGAAAT TTTGACATTTCCTCTTCTTCAACTATGTAAGTTGTTCCCGTGGAACTTGATTACTTACCACCCAATCAGTTGAGAGGAGA TTTAAAAGATTCTTATGGGCAAAAATCAAGCCATACCCATTCTCATTTTGGAAGTACAATATGCAATGCACTTCAAAATC TTGGTATGTTGTACATCTAACCTCTAACTCCCTAACATGCTTTTTCTCTTAGTTTCTGTTTCTCTTCAAAAATAAGTAAC CTTATTTGCAGTTCCTGGTATAAAGCTAGTTCGAGATGCAAAGTTAAGACAAGAATCTGCTGTGAGATTGGTAGAATTTG TTTGCTCACAAGTTTCAGCCATGAACGACTCTCAATTCTGGCAGACTTTTGTGAGTGCAGGCATTATCTTCAATGCCGCA TCATCTGGCATAGTTGAAATCTTAAGGATTTGTTGCCAATTTTTTCCTGATTTAGTTTGGACTCACATGCCAAATGAAGG GTACATAGCTCAAATAGCCATCAAGAACCGGCAAGAAAAAGTTTTCAGTTTTCTGTGCAAGATGCCAATCATTTGCAAGT TTTTAGTCTTAGCTTTAGATGAATCACAGAACACCACATCACATCTGGCAGCAAGGTTTACTTCTCCTAAACTAGCATCA ATTTCTGGTGCAGCATTTCAAATGCAGAGAGAGTTACAGTGGTTCAAGGTTTGTTCAATCTCACAATCGCCTTCTTAGTG CAGGTTTGGAAACTCGTTCCAAAACCAAAGTGAAGATAAAATCATGGAGGACAGAAGCAAAAACTAAGAGAAGTTGTTTC TGCCCACCAAGATTTTGGTTTCACCATGGTTTTAGAACGAGTTTCCAAACATGCTAATTGTGAAGTACAATTCGGAAAAG ATGTTGATAGGATGGGATGATGTCCAACAGGAAGTAGAGAAATGGGATCACCCTCTCCATAAAGAAGTAAAAGACCAAGA TGGTAAAACAGCTTGGCAATTGTTCAGGGAAGAGCACAAAGCATTGCTTGAAGAAGGGAAGAATTGGATGAAGGACACAT CAAACTCTTGCATGATAGTGGCAACTCTTATTGCTACAGTGGCTTTTGCTGCTGCTATCACAGTACCTGGAGGCAACCAA CAGGACAAAGGATTCCCAATATTCTTGCCACATAACACATTTTTAGTGTTTATTGTGTCGGATGCATTAGCTTTGTGTTC CTCAATGGCTTCTCTTCTGATGTTTTTAGCAATCCTGAATGCGCCCTATGCGGAGGAGGATTTTCTTAACGCATTACCCC ATAGATTGATAATTGGTTTGGCATCTCTGTTCTTTGCCATAGTGACCACAATGATAGCATTTAGTGCAGCCCTGTCTTTG TTGCTCCAGGAGAGACTAAAATGGGTGCCAATTCCTATTGTTCTTCTGGCTTGTGTTCCGATCACTTTATTTGCAAGGCT TCAACTTCCATTGTTCATACAAATGATCATATCAACATATGGATCTCCCATTTACCATCATCAGAGACTTTGGTAAGGCG CTTCTGGTCTATTCTATAGCTCATAAGAAACAAGACAGCAAGGAAAACAAGACAAAATCAAGTTGCTATGTCTCTTTTGT AAAGCACCCTGTCTCGTCTATTAAATTTGTGTCAAATATATACACATCAAATTTAAATTTTCCCATTCATTCTTTTATCT GTTAAACCTTCCCATTTACCTATTCCAAAAGCATCCAAGGCTCTCTCTCTCTCTCTCTCGCTGGTCTGTGTTTCTCTAAG TTTAACATTATTGAATACCAAAACCTTGCTCTACACCATTGGATAAACAGATAATCAGGGAATACAAATGCTGATACTAA ATGTCTCTTATCAAATAAGTATATGCAAG
CDS sequence (LotjaGi6g1v0150600.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTACTAAAAGAATCAAGTTCACTGATGCCTGACGATGATGTCAAGGCTGCTATTACTGAGTTTGCTAGGGGATTCAA CCACAGTTACTACCAACCCCTGCACATAGCAATACTAAAAGGCGATTGGAAATCTACAAAGGCTTTCCTTGATAGAGATC CAAGTGCATTGACAGCAAAGATTACCATGATTGGCAGGACTGCACTTCATGTTGCGGCGCTCGGAGGTCAGTGGCGGCTT GTTGAGAAGCTGGTGCAACATGTGCCGGCACATTTACTTGGAGAACTTGACTTGATGGGTTGTACTTGCCTACACTATGT TGCAATGGGTGAAAGCATAATGGCAGCCAAAGCATTGGTGGCTAAAAATCCTTCTCTGACACAAATTATAGATTTCAGAG GTTCCACACCACTCATCTATAGTATTACCTCTACCAGATGTAAGGAGATGGTGTGGTATCTTGTCTTGAACACTACAGAT GAGAGACCTGGTTCTCCATTCTCTGGTCCTTCTGCTGGTCTGCTTGTGGCTTTGCTTACTGCTGCCGGATTGCATGATAT CACCATGTATCTTCTTCAGCAGTACCCTAACTTGGCCACTATTTCTGATTCAAATGGAAGCACAGTGCTCAATGTATTGT CGAAACTGCCCTCGCATTTCCAAGGTGGAAATAAGCTTAGGTTTTGGGGGAAATGCCTTTACCATTTTGTTCCCGTGGAA CTTGATTACTTACCACCCAATCAGTTGAGAGGAGATTTAAAAGATTCTTATGGGCAAAAATCAAGCCATACCCATTCTCA TTTTGGAAGTACAATATGCAATGCACTTCAAAATCTTGTTCCTGGTATAAAGCTAGTTCGAGATGCAAAGTTAAGACAAG AATCTGCTGTGAGATTGGTAGAATTTGTTTGCTCACAAGTTTCAGCCATGAACGACTCTCAATTCTGGCAGACTTTTGTG AGTGCAGGCATTATCTTCAATGCCGCATCATCTGGCATAGTTGAAATCTTAAGGATTTGTTGCCAATTTTTTCCTGATTT AGTTTGGACTCACATGCCAAATGAAGGGTACATAGCTCAAATAGCCATCAAGAACCGGCAAGAAAAAGTTTTCAGTTTTC TGTGCAAGATGCCAATCATTTGCAAGTTTTTAGTCTTAGCTTTAGATGAATCACAGAACACCACATCACATCTGGCAGCA AGGTTTACTTCTCCTAAACTAGCATCAATTTCTGGTGCAGCATTTCAAATGCAGAGAGAGTTACAGTGGTTCAAGGAAGT AGAGAAATGGGATCACCCTCTCCATAAAGAAGTAAAAGACCAAGATGGTAAAACAGCTTGGCAATTGTTCAGGGAAGAGC ACAAAGCATTGCTTGAAGAAGGGAAGAATTGGATGAAGGACACATCAAACTCTTGCATGATAGTGGCAACTCTTATTGCT ACAGTGGCTTTTGCTGCTGCTATCACAGTACCTGGAGGCAACCAACAGGACAAAGGATTCCCAATATTCTTGCCACATAA CACATTTTTAGTGTTTATTGTGTCGGATGCATTAGCTTTGTGTTCCTCAATGGCTTCTCTTCTGATGTTTTTAGCAATCC TGAATGCGCCCTATGCGGAGGAGGATTTTCTTAACGCATTACCCCATAGATTGATAATTGGTTTGGCATCTCTGTTCTTT GCCATAGTGACCACAATGATAGCATTTAGTGCAGCCCTGTCTTTGTTGCTCCAGGAGAGACTAAAATGGGTGCCAATTCC TATTGTTCTTCTGGCTTGTGTTCCGATCACTTTATTTGCAAGGCTTCAACTTCCATTGTTCATACAAATGATCATATCAA CATATGGATCTCCCATTTACCATCATCAGAGACTTTGGTAA
Protein sequence (LotjaGi6g1v0150600.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLLKESSSLMPDDDVKAAITEFARGFNHSYYQPLHIAILKGDWKSTKAFLDRDPSALTAKITMIGRTALHVAALGGQWRL VEKLVQHVPAHLLGELDLMGCTCLHYVAMGESIMAAKALVAKNPSLTQIIDFRGSTPLIYSITSTRCKEMVWYLVLNTTD ERPGSPFSGPSAGLLVALLTAAGLHDITMYLLQQYPNLATISDSNGSTVLNVLSKLPSHFQGGNKLRFWGKCLYHFVPVE LDYLPPNQLRGDLKDSYGQKSSHTHSHFGSTICNALQNLVPGIKLVRDAKLRQESAVRLVEFVCSQVSAMNDSQFWQTFV SAGIIFNAASSGIVEILRICCQFFPDLVWTHMPNEGYIAQIAIKNRQEKVFSFLCKMPIICKFLVLALDESQNTTSHLAA RFTSPKLASISGAAFQMQRELQWFKEVEKWDHPLHKEVKDQDGKTAWQLFREEHKALLEEGKNWMKDTSNSCMIVATLIA TVAFAAAITVPGGNQQDKGFPIFLPHNTFLVFIVSDALALCSSMASLLMFLAILNAPYAEEDFLNALPHRLIIGLASLFF AIVTTMIAFSAALSLLLQERLKWVPIPIVLLACVPITLFARLQLPLFIQMIISTYGSPIYHHQRLW
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 471 | 471 | - | – | |
| PANTHER | 3 | 617 | 615 | 1.6E-232 | – | |
| PANTHER | 3 | 617 | 615 | 1.6E-232 | – | |
| Gene3D | 12 | 223 | 212 | 1.9E-17 | ||
| ProSiteProfiles | 29 | 155 | 127 | 13.018 | ||
| SMART | 29 | 59 | 31 | 200.0 | ||
| SUPERFAMILY | 33 | 269 | 237 | 2.18E-18 | ||
| SMART | 64 | 93 | 30 | 6.0 | ||
| SMART | 99 | 128 | 30 | 7.0 | ||
| TMHMM | 315 | 337 | 23 | - | – | |
| Pfam | 463 | 574 | 112 | 3.1E-30 | ||
| TMHMM | 471 | 493 | 23 | - | – | |
| Phobius | 472 | 490 | 19 | - | – | |
| Phobius | 491 | 509 | 19 | - | – | |
| TMHMM | 508 | 530 | 23 | - | – | |
| Phobius | 510 | 539 | 30 | - | – | |
| Phobius | 540 | 550 | 11 | - | – | |
| TMHMM | 551 | 573 | 23 | - | – | |
| Phobius | 551 | 577 | 27 | - | – | |
| Phobius | 578 | 582 | 5 | - | – | |
| Phobius | 583 | 602 | 20 | - | – | |
| TMHMM | 583 | 605 | 23 | - | – | |
| Phobius | 603 | 626 | 24 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi6g1v0150600.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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