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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0154400 |
| Transcript ID | LotjaGi6g1v0154400.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | EH domain-containing protein 1; TAIR: AT3G20290.1 EPS15 homology domain 1; Swiss-Prot: sp|Q94CF0|EHD1_ARATH EH domain-containing protein 1; TrEMBL-Plants: tr|I1N0J5|I1N0J5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0154400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:43264414..43271082) extracted from Lotus japonicus Gifu genome v1.2.
TTAAGCATCAGTTTTGCGCCTATATAGTCTAGTTTCCAATTCCAGCAACAATATTGGAACAATTTCTTCCCGTGTAACAA ACCAACCCTCTCTGCCTTTGCAACCCCTCTTGGTATTTCATACAGAACATTGAAATCCAAATTTCCAATTTGGTATCATT GTTCGTGTAATGGAGATTGACACAACCCCAATTGATTTATGCTCCAAGGAACACCTCGACCTTTATCAAGAGTGGTTCAA TTATGCAGATGCAGGTTCTTCTTTCAACAACTTTATGCTTTTTATTATCTTTTATGTACATTTAAACATATGGGGTGTTG CTTTTGGCCATGTTTGTGTTCATATTTTTGAGGAATTGATCTCATTATATAAGCTCTTTTAAAAGGGAAAAGATAAATGC ACGTGAATGGTGTAATGTTGAATATTCCTTTGTAGAACCAGGGTGCAAAGTTGTGATTAAGATTTTTTTAAATCACCCCA TTTTTCCAATTAATCCATCTGTGTTAATTTTTTGTGCAAAATAAATTGGTTTATCAATTTACTTATTTATGAATAATGGG GTGACTAGATGATTAAGTTTTTGCAGATGGTGATTGTCGTTTTACCGGGAATGAAGCCACCAAGTTTTTTGCCATGTCGA ACTTGTCCCGACAAGATCTTAAGCAGGTTTTGAATTTCTTTTATTTGTTTTTGTTTATTGGAACAACGTTTATATATAGA TAAGATTGGTGTATTTGACAATTCTATTTGTTTGCTAATGATGCTTGGTCTCTCTTGTTTTTTCTTTCTTTTCCTTTTAA CTTAGTTGTTTCTTTGTTGCTCCCCTTCCCAAAATAAGGTGTGGGCTATTGCAGATTCAAAGAGAGAAGGATATCTTGGT ATCAAAGAATTTGTCATTGCAATGCAGGTACCTTTTTTGTGAAAAATATATTTGCTTTATTTTAAGCTTGATGCTAACCA ATTTCCAGAATCTAACCCATTTGAATTATAGCTAATTTCTCTGGGACAAGCTGGACACCCAATAACACATGATCTTTTGA CTAGTGATGGTAAGTTCTGGACATATAGGTTTATCTTCTATTATATGGTTGAATGATACTGTCTTTATCATTTAAAGATT ATCAAATGCACATATTTGTTGGTCTTAAGTGTTTATATTATCAAGCTACCAGCTGATTGAAGCTTAACTTATATTTCAGT TTTGAAAAACGCTAAACCACCCACAATGGAGGGTTTGGATAAATTAATTGCAGTAAGTATTTTTTTAGTTTTTTGGTTTA TATTTTATGTTCATTTAGTGGAAGTGCTTATCAGCACTTGGCTTTGTGCAGAAGAAAAAGCGCAAACATAAAGACAAAGA TCATGGTAATATATTTCTCATTTCTCTTACATAAGGCTCATTTTGCTTTTGGATTTTATATTTCTTTCTTCTTTTCTCTT GAAATTTCAAATTGGACTAACGAGAAATAATGCAGGTAGCACACTGTCATCATCTTCAAGTAATTGGTTTAATGCAAAGT CAACAAAAAAGGTAAGCAATTATGTTACTTTTATAATATTACTCCGAGTGTTTCTAGGTAAGCATTATCCTTGTCTTTCA CTAAGGAAAATATTGGATACTTAGTGTCTGTTTGGTTCCACATTTGAGAGCCTTATAATCAATTCTCATTTACCATAATC ATTTTAGGTGGTTATATTGATGTTTGACAACGACTAAGAGAATTGATTCTAGTGCCAAAATCATTTTTGCGATGAATCTA GGGAAAGCAGATTTTGCAGTGGACATAATCAATTGTGAGATTTCATAACTGGATTTTACAAAATTAATAGAAAATATTTT TCTCATAAACGTATCCGAACATATATCACTTCATTTTCAACTCACTTTTACCATAATCAATTCTATCCAAAATCAATTAT GATAACACTGATCCAATGAGAGACTTGATTTGCTTAAGTTCAGGGCATTTTATATCACCATGCTTTCTTAAAGCATAAGA AATTGAATTTGGTTAAAATTTCTCTGTATTTGTTAGGTGCATGCTATGAGTTGTATAACAGCTACAAAAGCTTAAACTTA ATTTCATAGAGGCTTATTATTCTTCATTTTTTATTATCTTCTCTTTCCGTTAAAGATTCTGAATCTAGCATTTCAAGCAA TGGATGGTTAGAGGAACGGATTAAAATGAAATTTTTGGTCTTTTTACTATATATTTAGTTATTGCAACCTGTACTGGGTC AGAGAACTATAAATTTATTTGGAAATTTTAGCTAATTACTTTACTGGATTTGAATTGAGCTAAGCAGCATAGATTCTGAG AATTGACATGGTAAAATTATGAAATATTCATGTTTCATTGAATTTCTTTCTAGGCAGTTATTAGGGGACTGAAACCGACA TTGTCATGTTACTAGTATGTTTGCAAGCAACTTAAGCTAGTATTGGTAATGTGCTTGAGACTGAACTAGTGAGAATGGAG GTGTCAATTTGGAATTGTTAACATCTTGTTTTTGGACTAACAAATTGCGTGTGTTTCTCATATCTATCTAATTTGGTTAT GATGTTACAGTAGATATATTCTTGAGGTTGCTCTTTTATATTCTTCGCTGCTTCCTTGCTATTGTTAGTTTTTTAAAATC TGACAAATGCGATCATATGGATTTTTAACTTACATTTTTTTGTGCATGTGTTTTAGATACCTGAGTCCTCTGTGACATCA GTTACCGATGGTTTGAAGAGACTCTACATTAAGAAGTTGAAGCCTTTAGAAGTTACTTACAACTTTAATGATTTTGTATC TCCTTTATTGGTGAGTAGGTAACCCTGATTGATTTGTTTAGCAGAGAAATATTGCTAGATATTCTAAATTCATAGTATTC TAGATTCGAAGTCACTTGTTTAGAGTCCGTTCGGAAGCGGATCAGATAACACTTATTGGAAATTATCCAGGGCTTTTTTC TAGTAGATAAACTCTAATAAATACTCTTTAGTCTGTATTGTGACCGTGGTTTAAATATGGACATGTGGATACCCAATCAG GTTCTCTATTAATTGTTATTCCTTACTGCAGACAAATAGTGATTTCGATTACAAACCTATGGTTCTGCTTTTGGGTCAAT ACTCAACTGGGAAAACAACATTTATTAAACATATGCTTAAAAGTGATTATCCAGGCAAGTGATTCTCCAACCTTTTCTAT GTGTGTAGTATATTTGTGAGAGTGCTCATATCTATTATCCAATATGTTACTGATTAATATTTTTCTCAATTACTTTCAAT AGGAGCTCATATTGGACCTGAGCCAACAACAGATAGGTTTGTTGTTGTCATGGTATGTCCCGGCCTTTTAATCTCCACTG ATACTGATATGGTCTTTGAGTGGCACAAGTCTTCAAAGTTTTCTCAGTTTTAAATTTATATATTAAATTGACTACTAGTC CTGACATGATTCAAAATCTTCCAAGAGTTGTTTATTGGTAAAATATTTGACTTTCTTATGCTATTGTAAACCTTAAGCCT GTAATTGCAATCTTGGATGAACATTTTTACTAAAATGCAATGTTACATGTCTTTTCAAACTAGAATGAGTCAATGAGGGA ATGGTGCTATTGAGATAAGTGATCATAAATATCATTACATTCATGGATACTGTGACAGATATACTATGTGAAGCAATAAC ATTCAAAGTGGGAGGGAAGGGTTTTCTATTAATTCATTCATACACGGTAGAAACCCACGATGAGCCAAGATCATGGTTGA TAGAAGAAAATTCCCTCAGTTTTTTCTTCTGTCCACCATGATTTTGGCATCACCATAATTTTCTACTGTGTATCCAAACA TGCACTTCGTGAGATTTCTAGGCATTTTGGGATATTTGGTCCTTAGTGTATACTTTTAACATCAACATAAGTTCCAAGTT TGATATCTTGAAATGATGGTCATCTGTGCAGTCTGGACCTGATGAGAGAAGTATTCCTGGTAATACTGCTGCTGTCCAAG CAGATTTACCATTTGGTGGTCTTACAAAATTTGGCACATCTTTTTTGTCCAAATTTGAGTGTTCTCAAATGCCTCATCCT GTAAATACTCTAAACCCCTCCAAAATATTATGAAAATATTTTCCTTTTGTAGCTTTTGGAACTAACTTTATTCCTCAATT TCCCAAAGCTACTGGAGCATATTACCTTTGTGGACAGTCCTGGAGTTCTATCAGGAGAAAAGCAGCGGACGGAAAGATCA TATGATTTTACCGGTGTAACATCTTGGTTTGCTGCTAAGAGTGATTTAATACTCCTTATGTTTGATCCTCACAAACTTGA TATCAGCGATGAGTTCAAGCGTGTGATAGCATCCCTACGAGGCCATGATGATAAAATTCGAGTTGTTTTGAACAAGGCAG ACCAAGTTGATACTCAACAAGTAAGAGCATATGTAATTAAGTTTTTTTTTCAAAAGCAAAATATATATTGATGAGAAAAA TGTCAGGATAAATAACCTTCCTAAAAAAGCCAAAAACCGGCATAGCCAGCAACAACCCAACCCACAACGAGCAACAACTA GTCCAACTAAAACCTCCAAAGCCGAAAAGAAAACACCAAAAGCAAACCAACCCAAAAGCCCACAAGGACCCCAAAACACC AACTTAACACTAAAACCTATACCTACCTGTGCTGACCTAAGAAGACTTAAACAAATCTATCGCAACATTGTACGGGGAGG ACTTACCAGTATATTTGTATGGCCTCATGTTTGCAGCTAATGAGGGTATATGGTGCACTAATGTGGTCACTTGGGAAGGT GCTGAATACTCCTGAAGTCATGCGTGTATATATTGGGTAAGTCACTTCATGTGTGTGTGTGCACTCTATTGTCAATCTTG AAATGTTGTCTATTGCAATTACAAGTTTTGAGCTAAGCATTTTTTTGCATGCCATGAAATTGCATGTCTATTATTTTTGC TGGTACACTTCATATTTCTCACCTCTGTACACATTCCTATGAAACTTGGTTGCGATTTAACTGACTTTTTCCTCCTTGCT TATGAGACTACCTTGTGCTCTTCTCTGATCAAATAACTTATTTTGGCAGCTCCTTCAATGACAAGCCTTTAAATGATGCT ATTAGTGGTCCACTTGGCAGTGAACTCTTCGAAAAAGAACAGGAAAACCTTCTTTCAGATCTCAAAGATATACCTAAAAA GGCCTGTGATCGAAAAGTGAGTTTTTTTTTTCACCATGCAACATAATAATAAATTTCCAATATCATAAAGATTTGACAAG GATTTACATGACTTTCAATGGCCAAACACAACTCTCCTCCTTTCTTTGGATTTGTGGATTGTTATGTCCTCTTAATATTA ATTACGAAAAGGCTTTGATTATTGTTAATAGTATTTTTCCGCTAAATTTTGCATGTTTGCAAACATTTTCAATGAGGTTT CATTCAACGTTTAAAATAATGTTTGAACAAGGAAGATTGGAATATGGATGGCATATGAATGAAATCATAAGGAGTTAAGT CTATTGAATTAAGAGTATTGATGCATTTAATTTGGGGGGAATCACTATTTTAGTACAAAAGCTATTCTCCTCATAGCTTC TGTTGTAATTTTGTGCATGCAAGTTTGATGTAATATAATCTTACTTTTGTTTCACTATTGATTATAGGCTGCTATTATAG GATGTTATCTAATATCTTGTATTTCAATAACCAGTTAAATCACTAATCATGTTTTCATTTGTTGAAATTACTTCCTTTAA TAATTTAGCGACATTTGTGCATATGGTAGATCAATGAATTTGTAAAACGAGCCCGAGCTGCGAAGATACATGCTTGTATC ATCAGCCATCTGAAAAAGAAGATGCCTGCCATGATGGGGAAAGCTAAAGCTCAGCAAAAGCTTATTGATAATTTGGAGGA TGAATTTGCAAAGGTATGAATCCAACTCTGCACATTCTTTCTTTTCACATCATGTGTTTAGCTATTAAAAGTATGTTTAT ATCATAACTCATCAATATGCATATGTTGCTATGATAAAGATTGGAAATTGAATTGCATGTGTCTAAGTCTAACACAAATT CTAAACAGGTACAAAAGGAGTTCCATCTACCAGCTGGAGACTTCCCAAATGTTGATCACTTCAAGGAGACCTTGAATGGT TACAACATTGGCAAATTTGAGAAATTGAAACCAAAGATGACACAATCTGTGGATGACATGCTTGCTTACGACGTTCCTAA CCTCTTAAAGACTTTCAGAAATCCCTATGGTTAAGGTTATAAGTACTCACTTTGTGATAAAAAGTTTATAAAATTCTTAT GGATTGGGATGAAATTCCATTCACATTATACTCAGTTTGTATCCAAACAAATACTAAGTTTGCGAGCAATTTAGATAGTG GCACAAGGATATACTAATGTGACATGCATCATCTAATCCATGTATATTCAATGGCTTCACCAATTGCTCTGCTTTTTTAG AGGGAAGGCTGTAAAATAAGTACTAATTATCCGGTGCCTTTTAATGCAGAAGGGTTTTTTGTTGTTCAATGAAGATGTAT TAGTTATCTCAGATAATTTCTTTGTCTTGCGTGGCTCTAAATACAATAAACCAGTCACATTATTTTCTTGCTATTCAGTT CTTTGCAAAGCTTTGAAAGAAGATGATGC
CDS sequence (LotjaGi6g1v0154400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGATTGACACAACCCCAATTGATTTATGCTCCAAGGAACACCTCGACCTTTATCAAGAGTGGTTCAATTATGCAGA TGCAGATGGTGATTGTCGTTTTACCGGGAATGAAGCCACCAAGTTTTTTGCCATGTCGAACTTGTCCCGACAAGATCTTA AGCAGGTGTGGGCTATTGCAGATTCAAAGAGAGAAGGATATCTTGGTATCAAAGAATTTGTCATTGCAATGCAGCTAATT TCTCTGGGACAAGCTGGACACCCAATAACACATGATCTTTTGACTAGTGATGTTTTGAAAAACGCTAAACCACCCACAAT GGAGGGTTTGGATAAATTAATTGCAAAGAAAAAGCGCAAACATAAAGACAAAGATCATGGTAGCACACTGTCATCATCTT CAAGTAATTGGTTTAATGCAAAGTCAACAAAAAAGATACCTGAGTCCTCTGTGACATCAGTTACCGATGGTTTGAAGAGA CTCTACATTAAGAAGTTGAAGCCTTTAGAAGTTACTTACAACTTTAATGATTTTGTATCTCCTTTATTGACAAATAGTGA TTTCGATTACAAACCTATGGTTCTGCTTTTGGGTCAATACTCAACTGGGAAAACAACATTTATTAAACATATGCTTAAAA GTGATTATCCAGGAGCTCATATTGGACCTGAGCCAACAACAGATAGGTTTGTTGTTGTCATGTCTGGACCTGATGAGAGA AGTATTCCTGGTAATACTGCTGCTGTCCAAGCAGATTTACCATTTGGTGGTCTTACAAAATTTGGCACATCTTTTTTGTC CAAATTTGAGTGTTCTCAAATGCCTCATCCTCTACTGGAGCATATTACCTTTGTGGACAGTCCTGGAGTTCTATCAGGAG AAAAGCAGCGGACGGAAAGATCATATGATTTTACCGGTGTAACATCTTGGTTTGCTGCTAAGAGTGATTTAATACTCCTT ATGTTTGATCCTCACAAACTTGATATCAGCGATGAGTTCAAGCGTGTGATAGCATCCCTACGAGGCCATGATGATAAAAT TCGAGTTGTTTTGAACAAGGCAGACCAAGTTGATACTCAACAACTAATGAGGGTATATGGTGCACTAATGTGGTCACTTG GGAAGGTGCTGAATACTCCTGAAGTCATGCGTGTATATATTGGCTCCTTCAATGACAAGCCTTTAAATGATGCTATTAGT GGTCCACTTGGCAGTGAACTCTTCGAAAAAGAACAGGAAAACCTTCTTTCAGATCTCAAAGATATACCTAAAAAGGCCTG TGATCGAAAAATCAATGAATTTGTAAAACGAGCCCGAGCTGCGAAGATACATGCTTGTATCATCAGCCATCTGAAAAAGA AGATGCCTGCCATGATGGGGAAAGCTAAAGCTCAGCAAAAGCTTATTGATAATTTGGAGGATGAATTTGCAAAGGTACAA AAGGAGTTCCATCTACCAGCTGGAGACTTCCCAAATGTTGATCACTTCAAGGAGACCTTGAATGGTTACAACATTGGCAA ATTTGAGAAATTGAAACCAAAGATGACACAATCTGTGGATGACATGCTTGCTTACGACGTTCCTAACCTCTTAAAGACTT TCAGAAATCCCTATGGTTAA
Protein sequence (LotjaGi6g1v0154400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEIDTTPIDLCSKEHLDLYQEWFNYADADGDCRFTGNEATKFFAMSNLSRQDLKQVWAIADSKREGYLGIKEFVIAMQLI SLGQAGHPITHDLLTSDVLKNAKPPTMEGLDKLIAKKKRKHKDKDHGSTLSSSSSNWFNAKSTKKIPESSVTSVTDGLKR LYIKKLKPLEVTYNFNDFVSPLLTNSDFDYKPMVLLLGQYSTGKTTFIKHMLKSDYPGAHIGPEPTTDRFVVVMSGPDER SIPGNTAAVQADLPFGGLTKFGTSFLSKFECSQMPHPLLEHITFVDSPGVLSGEKQRTERSYDFTGVTSWFAAKSDLILL MFDPHKLDISDEFKRVIASLRGHDDKIRVVLNKADQVDTQQLMRVYGALMWSLGKVLNTPEVMRVYIGSFNDKPLNDAIS GPLGSELFEKEQENLLSDLKDIPKKACDRKINEFVKRARAAKIHACIISHLKKKMPAMMGKAKAQQKLIDNLEDEFAKVQ KEFHLPAGDFPNVDHFKETLNGYNIGKFEKLKPKMTQSVDDMLAYDVPNLLKTFRNPYG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SMART | 8 | 103 | 96 | 4.4E-8 | ||
| Gene3D | 11 | 107 | 97 | 1.0E-21 | – | |
| SUPERFAMILY | 12 | 95 | 84 | 2.35E-18 | ||
| ProSiteProfiles | 15 | 105 | 91 | 13.416 | ||
| Pfam | 19 | 80 | 62 | 1.0E-6 | ||
| CDD | 19 | 85 | 67 | 6.42886E-19 | ||
| ProSiteProfiles | 48 | 83 | 36 | 9.436 | ||
| PANTHER | 99 | 536 | 438 | 1.2E-273 | – | |
| PANTHER | 99 | 536 | 438 | 1.2E-273 | – | |
| Pfam | 157 | 189 | 33 | 2.2E-15 | ||
| Gene3D | 157 | 523 | 367 | 5.1E-155 | – | |
| SUPERFAMILY | 183 | 461 | 279 | 1.03E-27 | ||
| ProSiteProfiles | 188 | 424 | 237 | 29.737 | ||
| CDD | 193 | 437 | 245 | 1.67356E-148 | – | |
| Gene3D | 194 | 422 | 229 | 5.1E-155 | – | |
| Pfam | 194 | 353 | 160 | 1.4E-9 | ||
| Pfam | 429 | 531 | 103 | 2.3E-36 | ||
| Coils | 462 | 482 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Calcium ion binding | Interacting selectively and non-covalently with calcium ions (Ca2+). | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | GTP binding | Interacting selectively and non-covalently with GTP, guanosine triphosphate. |
Expression pattern of LotjaGi6g1v0154400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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