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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR040990
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 11 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.685s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi1g1v0024800.1
n.a. EH domain-containing protein 1; TAIR: AT3G20290.1 EPS15 homology domain 1; Swiss-Prot: sp|Q94CF0|EHD1_ARATH EH domain-containing protein 1; TrEMBL-Plants: tr|G7K8N7|G7K8N7_MEDTR Calcium-binding EF hand protein; Found in the gene: LotjaGi1g1v0024800 LjG1.1_chr1 2962583 2968507 -
2 domain predictions
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LotjaGi1g1v0024800.2
n.a. EH domain-containing protein 1; TAIR: AT3G20290.1 EPS15 homology domain 1; Swiss-Prot: sp|Q94CF0|EHD1_ARATH EH domain-containing protein 1; TrEMBL-Plants: tr|A0A0L9UVF7|A0A0L9UVF7_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0024800 LjG1.1_chr1 2962869 2968265 -
2 domain predictions
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LotjaGi1g1v0024800.3
n.a. EH domain-containing protein 1; TAIR: AT3G20290.1 EPS15 homology domain 1; Swiss-Prot: sp|Q94CF0|EHD1_ARATH EH domain-containing protein 1; TrEMBL-Plants: tr|I1JJC9|I1JJC9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0024800 LjG1.1_chr1 2962869 2968265 -
2 domain predictions
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LotjaGi1g1v0024800.4
n.a. EH domain-containing protein 1; TAIR: AT3G20290.1 EPS15 homology domain 1; Swiss-Prot: sp|Q94CF0|EHD1_ARATH EH domain-containing protein 1; TrEMBL-Plants: tr|A0A1J7HUL5|A0A1J7HUL5_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0024800 LjG1.1_chr1 2962869 2968265 -
2 domain predictions
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LotjaGi1g1v0024800.5
n.a. EH domain-containing protein 1; TAIR: AT3G20290.1 EPS15 homology domain 1; Swiss-Prot: sp|Q94CF0|EHD1_ARATH EH domain-containing protein 1; TrEMBL-Plants: tr|G7K8N7|G7K8N7_MEDTR Calcium-binding EF hand protein; Found in the gene: LotjaGi1g1v0024800 LjG1.1_chr1 2962869 2968265 -
2 domain predictions
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LotjaGi1g1v0024800.6
n.a. EH domain-containing protein 1; TAIR: AT3G20290.1 EPS15 homology domain 1; Swiss-Prot: sp|Q94CF0|EHD1_ARATH EH domain-containing protein 1; TrEMBL-Plants: tr|A0A151U2E6|A0A151U2E6_CAJCA EH domain-containing protein 1; Found in the gene: LotjaGi1g1v0024800 LjG1.1_chr1 2962869 2968274 -
2 domain predictions
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LotjaGi4g1v0009500.1
n.a. EH domain-containing protein 1; TAIR: AT3G20290.1 EPS15 homology domain 1; Swiss-Prot: sp|Q94CF0|EHD1_ARATH EH domain-containing protein 1; TrEMBL-Plants: tr|G7K8N7|G7K8N7_MEDTR Calcium-binding EF hand protein; Found in the gene: LotjaGi4g1v0009500 LjG1.1_chr4 1264748 1269728 -
2 domain predictions
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LotjaGi4g1v0009700.1
n.a. EH domain-containing protein 1; TAIR: AT4G05520.1 EPS15 homology domain 2; Swiss-Prot: sp|B3LF48|EHD2_ARATH EH domain-containing protein 2; TrEMBL-Plants: tr|A0A0B2R9H2|A0A0B2R9H2_GLYSO EH domain-containing protein 1; Found in the gene: LotjaGi4g1v0009700 LjG1.1_chr4 1278449 1283227 -
2 domain predictions
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LotjaGi6g1v0154400.1
n.a. EH domain-containing protein 1; TAIR: AT3G20290.1 EPS15 homology domain 1; Swiss-Prot: sp|Q94CF0|EHD1_ARATH EH domain-containing protein 1; TrEMBL-Plants: tr|I1N0J5|I1N0J5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0154400 LjG1.1_chr6 43264414 43271082 -
2 domain predictions
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LotjaGi6g1v0154400.2
n.a. EH domain-containing protein 1; TAIR: AT3G20290.1 EPS15 homology domain 1; Swiss-Prot: sp|Q94CF0|EHD1_ARATH EH domain-containing protein 1; TrEMBL-Plants: tr|A0A199W5Q7|A0A199W5Q7_ANACO EH domain-containing protein 1; Found in the gene: LotjaGi6g1v0154400 LjG1.1_chr6 43264809 43270745 -
2 domain predictions
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LotjaGi6g1v0288500.1
n.a. EH domain-containing protein 1; TAIR: AT4G05520.1 EPS15 homology domain 2; Swiss-Prot: sp|B3LF48|EHD2_ARATH EH domain-containing protein 2; TrEMBL-Plants: tr|I1MFL9|I1MFL9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0288500 LjG1.1_chr6 60548068 60552537 -
2 domain predictions
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