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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0275700 |
| Transcript ID | LotjaGi6g1v0275700.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Regulatory protein NPR1; TAIR: AT5G45110.2 NPR1-like protein 3; Swiss-Prot: sp|Q8L746|NPR3_ARATH Regulatory protein NPR3; TrEMBL-Plants: tr|A0A151REX1|A0A151REX1_CAJCA Regulatory protein NPR1; Found in the gene: LotjaGi6g1v0275700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:59260691..59264123) extracted from Lotus japonicus Gifu genome v1.2.
ATGGCTCTTTCGGCCGAACCCTCGTCGTCGTTGAGCTTCACGTCATCTTCCCATTTATCAAATGGCTCTGTTAGCCACAA TATGGGAACTACTAATGGCTCTGATCCTGGACCTAACCTTGATGTTATCAGTTTGAGTAAGCTTAGCTCTAACTTGGAGC AGCTTTTGATAGATTCTGATTCTGATTATAGCGATGCTGAAATTATTGTGGAGGGGGTCGCGGTTAGGATTCATCGATGT ATTCTGGCTTCTAGGAGTAAGTTTTTCCATGAACTATTCAAGAGAGACAAAGGGTCATCAGAGAGCGGAGGGAAATCGAA GTATTGCATGAGTGATTTGTTGCCTTATGGCAAGGTTGGATATGAAGCCTTCCTCATATTCCTGGGCTATGTATATACTG GTAAACTTAAACCCTCTCCAATGGAGGTGTCTACTTGTGTTGACAATGTGTGTGCCCATGATGCTTGTGGGCCTGCAATA AACTTTGCTCTGGAGTTGATGTATGCCTCTTCCATTTTTCAAATACCAGAATTGGTATCACTTTTCCAGGTAAGCATTTC AATGTATGATGGCATAATTGAACACCGTATAACGCATATCATTTAGCTAACCATTTTAATATATGTTCATTATGTATCAA CCTCAGTAACGTACAACTTAGCCTGTTAATTTCCCAGAACATGTGAACCTACATATACGTCAGATAGAGTAGTAGTGCTC CAATGTAAATGCTTTCCTTTTCTGAAACAAAATCAATTATAGTTATTAGATCCAGTTTTTACATTTGTTGATTCTTAAGG AGTATGCAATTGAACTCTGTAATAAATTGACCTTATATCTTGCTTTGTTTAGGTACATCTTTTGTACTGGCATCTTATGC GTTGGGGCATAGTATCTTTTTAAATGATTGAATTCAATAACTTCACTTGTTCTGCTAAATCTTGAGAAGTTGCAAATTAA TTTCACATAAAAAATTACTAGCAATATTGTATCTGATTAGGCTTAAGGGTTGAGGAACTAATTCATGCTTTAAATTTTGC AGCGACGTCTTCTTAACTTTGTAGGAAAGGCGCTTGTAGAAGATGTCATCCCAATCCTCACACTTGCTTTCCAATGTCAA TTGAGTCAACTTGTCATTCAATGTGTTGACAGGGTGGCACGATCAGACCTAGACCAGATCTCAATCGAGAAAGAGCTTCC CCTTGAGCTCTCAGAAAAAGTTAAATTGCTGCGCCGCAATCCTCAGCAAGATGCTGAAAATACTGTAAATGATGCTTCTG AAGTGGAAGCTTTGTCTCTGAAGCGGATCACTAGAATTCACAAGGCATTGGGGTCGGATGATGTAGAGCTTGTTAGACTT CTTTTGGACGAGTCAGACATTACTTTAGATGAAGCAAATGCTCTCCATTATGCTGCAGCGTACTGTGACCCCAAGGTTGT TTCTGAGGTACTTGGTTTAGGTCTGGCTAATGTTAATCTTCGGAATTCTCAGGGTTACACAGTGCTTCACATTGCTGCCA AGCGCAGAGAACCTTCCATTATAGTATCTCTTCTTACAAAAGGGGCTTGTGCATCAGATTTAACTTTTGATGGTCAGAGT GCTGTTAGTATTTGTAGGAGGTTGACTAGGCCAAAGGATTACCATGCAAAAACAGAACAGGGGAAAGAAACAAACAAAGA TCGGATATGCATTGATGTTCTTGAAAGAGAAATGAGGCGGAATCCATTGGCTCGGGATACTGCTATCTCTTCACAAACAA TGGCTGATGATCTCCACATGAAGCTATTATATCTTGAGAACAGAGGTATTGTGTCATGGATAATATTCTTTTAGCTCCTT GCTTATGTTGTATGCATTGTTGTCAGGGGTCCAGCCTTTAGAATTTGAAATGCACAGTTTTCATTTTGTTGGGTGAAAAG TTCTGAAAACTGAGTCACTTTTTTAGTCTTTTATACTGGAGATAGTTATGACTTATGATATAGGATTGCAGTTCATTTGT CTCTAACCAACTTTGCATACATTCCAAAGCACAAAATGTAGAAGTAAGAATTTCTTTCATTGTGTGGAAAATACTTTCAA GTTGCCTATATTTACATTCTTCTTGTCTTTCCACATGCTAGGAATTTTTGTGCTAAACACCACTTAGAGAGGTATATGTT GTGAATTTTTGGGGTTTGGATTGTTTTGTTGACTACTTGTGTGAATGGATCTCAGAACTAACCAGTTGAGCTACCACCTA TATTGATTTTTGTTGTTTAACAGTTTGTGTCACCGATTCTATGTAATATAGGGAAGACTTTATGTAAATACAAGATATAA TTTGAGTTGGAATTTGGAAACGGAAATATTCGCAAGTTACCGATAATCTCCACATCAAAGTTTCAGCGTTCCAAAATTCT GGTTGTTTTGGATTTTTAAATGAAGAATTCTTTATAATTCTTTGGAGAATATATTAAGGCTACAACAAAGGGACAATTAT CTATAATCAAATTATTATTGTGCTTTAGGGTTCTTAAGTTATATATTTCTTTAACCAAAATAGAAAACAAGATGCACCCT AACTTAAGATATACGACTGTTCCCTTGGTAACAGGGGGTGTTAAATGAATAAGTTGGATGTGTAGAAGAGTGCAAGTTTT AGATGAATAGTACTATGGCCCCGACTAGGGTTGTGTGGTTTAGTTTACATCAAATGTGCTACTGCCAAGTCCTGATTGTG ATTAATTTCTTGCATGCTGTATTGTATCTGATAATAATTAATTGGGCTTTGGCTGAGGATGAGTTATGTAGAGTGATGTA GTTTCTTAAACTCATTGTTTTATATCTGTAGCAAAATGCCTTGGAGGGATGGTCATGTTGACATGAATATTTTCGTAATT CCAGTTTTAATGCAAGCACTAGTTAAGAAAAAAAGTTTGATGAGTCTTAAGTGTAGAAGCCTTGAGACCAGTTTCTTATG GTTGAAAGAAAGAGAAGCTGGTTTTGTGATATACTTATATGTTTTATAGTCCTGTCTTTTTTTATGCTGCCTACTGAATT CTCTAATGAGATCTGCTGAATGTTGTTTTTAACTGAGTATAATGTGTTCATGGAATATTTTATTGAGTATTGGCGCCTAC TGCAGTGGCTTTTGCAAGACTATTCTTCCCTTCAGAAGCCAAACTAGCAATGGACATCGCACATGCTGAGACAACATCCG AGTTTGCCGGTCTTTCAAGATCAAAAGGTTCAAATGGAAACTTAAGAGAGGTTGATCTCAATGAGACTCCCATAATGCAG AACAAAAGACTTCTTTCTAGGATGGAAGCCCTTATGAAAACAGGTAATTTCTGTCATTGTAAAATTCAATTTCCTATAAC CTTTTGTTGTAACTAAACAAGCAGAAATTGTGGCTACGCTTCGGACCCGGATTGGCTGCAGTTATTTTTTTGA
CDS sequence (LotjaGi6g1v0275700.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTCTTTCGGCCGAACCCTCGTCGTCGTTGAGCTTCACGTCATCTTCCCATTTATCAAATGGCTCTGTTAGCCACAA TATGGGAACTACTAATGGCTCTGATCCTGGACCTAACCTTGATGTTATCAGTTTGAGTAAGCTTAGCTCTAACTTGGAGC AGCTTTTGATAGATTCTGATTCTGATTATAGCGATGCTGAAATTATTGTGGAGGGGGTCGCGGTTAGGATTCATCGATGT ATTCTGGCTTCTAGGAGTAAGTTTTTCCATGAACTATTCAAGAGAGACAAAGGGTCATCAGAGAGCGGAGGGAAATCGAA GTATTGCATGAGTGATTTGTTGCCTTATGGCAAGGTTGGATATGAAGCCTTCCTCATATTCCTGGGCTATGTATATACTG GTAAACTTAAACCCTCTCCAATGGAGGTGTCTACTTGTGTTGACAATGTGTGTGCCCATGATGCTTGTGGGCCTGCAATA AACTTTGCTCTGGAGTTGATGTATGCCTCTTCCATTTTTCAAATACCAGAATTGGTATCACTTTTCCAGCGACGTCTTCT TAACTTTGTAGGAAAGGCGCTTGTAGAAGATGTCATCCCAATCCTCACACTTGCTTTCCAATGTCAATTGAGTCAACTTG TCATTCAATGTGTTGACAGGGTGGCACGATCAGACCTAGACCAGATCTCAATCGAGAAAGAGCTTCCCCTTGAGCTCTCA GAAAAAGTTAAATTGCTGCGCCGCAATCCTCAGCAAGATGCTGAAAATACTGTAAATGATGCTTCTGAAGTGGAAGCTTT GTCTCTGAAGCGGATCACTAGAATTCACAAGGCATTGGGGTCGGATGATGTAGAGCTTGTTAGACTTCTTTTGGACGAGT CAGACATTACTTTAGATGAAGCAAATGCTCTCCATTATGCTGCAGCGTACTGTGACCCCAAGGTTGTTTCTGAGGTACTT GGTTTAGGTCTGGCTAATGTTAATCTTCGGAATTCTCAGGGTTACACAGTGCTTCACATTGCTGCCAAGCGCAGAGAACC TTCCATTATAGTATCTCTTCTTACAAAAGGGGCTTGTGCATCAGATTTAACTTTTGATGGTCAGAGTGCTGTTAGTATTT GTAGGAGGTTGACTAGGCCAAAGGATTACCATGCAAAAACAGAACAGGGGAAAGAAACAAACAAAGATCGGATATGCATT GATGTTCTTGAAAGAGAAATGAGGCGGAATCCATTGGCTCGGGATACTGCTATCTCTTCACAAACAATGGCTGATGATCT CCACATGAAGCTATTATATCTTGAGAACAGAGTGGCTTTTGCAAGACTATTCTTCCCTTCAGAAGCCAAACTAGCAATGG ACATCGCACATGCTGAGACAACATCCGAGTTTGCCGGTCTTTCAAGATCAAAAGGTTCAAATGGAAACTTAAGAGAGGTT GATCTCAATGAGACTCCCATAATGCAGAACAAAAGACTTCTTTCTAGGATGGAAGCCCTTATGAAAACAGGTAATTTCTG TCATTGTAAAATTCAATTTCCTATAACCTTTTGTTGTAACTAA
Protein sequence (LotjaGi6g1v0275700.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MALSAEPSSSLSFTSSSHLSNGSVSHNMGTTNGSDPGPNLDVISLSKLSSNLEQLLIDSDSDYSDAEIIVEGVAVRIHRC ILASRSKFFHELFKRDKGSSESGGKSKYCMSDLLPYGKVGYEAFLIFLGYVYTGKLKPSPMEVSTCVDNVCAHDACGPAI NFALELMYASSIFQIPELVSLFQRRLLNFVGKALVEDVIPILTLAFQCQLSQLVIQCVDRVARSDLDQISIEKELPLELS EKVKLLRRNPQQDAENTVNDASEVEALSLKRITRIHKALGSDDVELVRLLLDESDITLDEANALHYAAAYCDPKVVSEVL GLGLANVNLRNSQGYTVLHIAAKRREPSIIVSLLTKGACASDLTFDGQSAVSICRRLTRPKDYHAKTEQGKETNKDRICI DVLEREMRRNPLARDTAISSQTMADDLHMKLLYLENRVAFARLFFPSEAKLAMDIAHAETTSEFAGLSRSKGSNGNLREV DLNETPIMQNKRLLSRMEALMKTGNFCHCKIQFPITFCCN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 506 | 506 | 1.1E-266 | – | |
| PANTHER | 1 | 506 | 506 | 1.1E-266 | – | |
| Gene3D | 39 | 222 | 184 | 1.3E-23 | – | |
| CDD | 47 | 190 | 144 | 9.72668E-70 | – | |
| SUPERFAMILY | 50 | 188 | 139 | 3.06E-16 | ||
| Pfam | 61 | 148 | 88 | 1.4E-11 | ||
| SMART | 64 | 190 | 127 | 1.6E-14 | ||
| ProSiteProfiles | 64 | 140 | 77 | 16.176 | ||
| Gene3D | 235 | 465 | 231 | 3.1E-17 | ||
| SUPERFAMILY | 262 | 376 | 115 | 2.8E-16 | ||
| SMART | 270 | 298 | 29 | 89.0 | ||
| Pfam | 276 | 358 | 83 | 1.5E-7 | ||
| ProSiteProfiles | 299 | 371 | 73 | 14.584 | ||
| SMART | 299 | 329 | 31 | 1.7 | ||
| SMART | 333 | 365 | 33 | 3.1 | ||
| ProSiteProfiles | 333 | 358 | 26 | 9.057 | ||
| Pfam | 375 | 505 | 131 | 7.0E-56 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi6g1v0275700.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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