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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0333500 |
| Transcript ID | LotjaGi6g1v0333500.1 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | RING finger protein; TAIR: AT3G47160.1 RING/U-box superfamily protein; Swiss-Prot: sp|Q5ZM74|RN141_CHICK RING finger protein 141; TrEMBL-Plants: tr|I3T0X1|I3T0X1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0333500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:64823053..64827826
CDS sequence (LotjaGi6g1v0333500.1
Protein sequence (LotjaGi6g1v0333500.1
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 10 | 252 | 243 | 1.3E-133 | – | |
| PANTHER | 10 | 252 | 243 | 1.3E-133 | – | |
| Gene3D | 121 | 222 | 102 | 6.3E-14 | ||
| SUPERFAMILY | 150 | 201 | 52 | 2.1E-12 | – | |
| Pfam | 153 | 199 | 47 | 1.0E-9 | – | |
| SMART | 156 | 193 | 38 | 4.0E-6 | ||
| ProSiteProfiles | 156 | 194 | 39 | 12.076 | ||
| ProSitePatterns | 171 | 180 | 10 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .