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| Field | Value |
|---|---|
| Gene ID | Lj1g3v2445990 |
| Transcript ID | Lj1g3v2445990.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: PAN domain-containing protein At5g03700-like [Glycine max] gi|356566760|ref|XP_003551596.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 8 | 8 | – | – | |
| SignalP | 1 | 23 | 23 | – | – | |
| PANTHER | 1 | 406 | 406 | 1.80E-209 | – | |
| Phobius | 1 | 23 | 23 | – | – | |
| PANTHER | 1 | 406 | 406 | 1.80E-209 | – | |
| PIRSF | 3 | 406 | 404 | 3.00E-81 | – | |
| Phobius | 9 | 18 | 10 | – | – | |
| Phobius | 19 | 23 | 5 | – | – | |
| Phobius | 24 | 406 | 383 | – | – | |
| SMART | 41 | 161 | 121 | 3.70E-04 | ||
| ProSiteProfiles | 41 | 159 | 119 | 9.193 | ||
| Gene3D | 79 | 166 | 88 | 2.90E-15 | ||
| SUPERFAMILY | 93 | 212 | 120 | 2.22E-18 | ||
| Pfam | 97 | 180 | 84 | 2.10E-16 | ||
| ProSiteProfiles | 334 | 406 | 73 | 7.539 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of Lj1g3v2445990.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v2445990.1, powered by CORGI.
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