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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR001480
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 160 results. Now displaying 2 of 4 with 50 rows per page. This search has taken 7.776s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj3g3v2888270.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230-like [Cicer arietinum] gi|502165379|ref|XP_004513553.1| chr3 35692151 35699684 +
6 domain predictions
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Lj3g3v2888270.2
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230-like [Cicer arietinum] gi|502165379|ref|XP_004513553.1| chr3 35692151 35699684 +
4 domain predictions
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Lj3g3v2888290.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230-like [Glycine max] gi|356544860|ref|XP_003540865.1| chr3 35706091 35711245 +
6 domain predictions
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Lj3g3v3080230.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RLK1-like [Cicer arietinum] gi|502088366|ref|XP_004488803.1| chr3 38444131 38444417 +
4 domain predictions
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Lj3g3v3375730.1
n.a. CM0216.590.nc [Lotus japonicus] gi|164605527|dbj|BAF98593.1| chr3 41496565 41500650 -
6 domain predictions
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Lj3g3v3375750.1
n.a. CM0216.570.nc [Lotus japonicus] gi|164605525|dbj|BAF98591.1| chr3 41501610 41512530 -
6 domain predictions
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Lj3g3v3375760.2
n.a. S-receptor kinase-like protein 2 [Lotus japonicus] gi|33945885|emb|CAE45595.1| chr3 41502576 41510652 +
6 domain predictions
 –
Lj3g3v3430230.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like [Glycine max] gi|356514870|ref|XP_003526125.1| chr3 42121977 42125580 +
6 domain predictions
 –
Lj4g3v0424260.1
n.a. Serine/threonine protein kinase [Medicago truncatula] gi|357475995|ref|XP_003608283.1| chr4 5701877 5707609 -
6 domain predictions
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Lj4g3v0424270.1
n.a. Serine/threonine protein kinase [Medicago truncatula] gi|357475991|ref|XP_003608281.1| chr4 5707741 5714818 -
6 domain predictions
 –
Lj4g3v1880210.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RLK1-like [Cicer arietinum] gi|502151559|ref|XP_004508500.1| chr4 25854220 25857592 -
6 domain predictions
 –
Lj4g3v1880230.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RLK1-like [Cicer arietinum] gi|502151557|ref|XP_004508499.1| chr4 25860390 25863203 -
6 domain predictions
 –
Lj4g3v1880270.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RLK1-like [Cicer arietinum] gi|502151559|ref|XP_004508500.1| chr4 25886907 25889261 -
6 domain predictions
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Lj4g3v1880320.1
n.a. Kinase-like protein [Medicago truncatula] gi|357478039|ref|XP_003609305.1| chr4 25892704 25893732 -
6 domain predictions
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Lj4g3v2951310.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330-like [Vitis vinifera] gi|359496523|ref|XP_003635255.1| chr4 39142990 39143937 +
6 domain predictions
 –
Lj5g3v1073720.1
n.a. Kinase-like protein [Medicago truncatula] gi|357478039|ref|XP_003609305.1| chr5 17401153 17402181 +
6 domain predictions
 –
Lj5g3v1073800.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RLK1-like [Cicer arietinum] gi|502151559|ref|XP_004508500.1| chr5 17405624 17407978 +
6 domain predictions
 –
Lj5g3v1097050.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330-like [Glycine max] gi|356560807|ref|XP_003548678.1| chr5 17626954 17627660 +
6 domain predictions
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Lj5g3v1872930.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300-like [Glycine max] gi|356574579|ref|XP_003555423.1| chr5 26761563 26764454 -
6 domain predictions
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Lj5g3v1972320.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At5g24080-like [Glycine max] gi|356535826|ref|XP_003536444.1| chr5 27797951 27801704 -
6 domain predictions
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Lj6g3v2116920.1
n.a. PREDICTED: receptor-like serine/threonine-protein kinase SD1-8-like [Cicer arietinum] gi|502077540|ref|XP_004485681.1| chr6 24716994 24720932 -
6 domain predictions
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Lj6g3v2128980.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g11300-like [Cicer arietinum] gi|502167944|ref|XP_004514287.1| chr6 24738264 24745354 +
6 domain predictions
 –
Lj6g3v2128980.2
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g11300-like [Cicer arietinum] gi|502167944|ref|XP_004514287.1| chr6 24738264 24741213 +
6 domain predictions
 –
Lj6g3v2130010.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330-like [Cicer arietinum] gi|502178680|ref|XP_004516311.1| chr6 24751493 24756604 +
6 domain predictions
 –
Lj6g3v2130020.1
n.a. PREDICTED: receptor-like serine/threonine-protein kinase SD1-8-like [Cicer arietinum] gi|502077540|ref|XP_004485681.1| chr6 24757026 24760897 -
6 domain predictions
 –
Lj6g3v2130140.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330-like [Vitis vinifera] gi|359496521|ref|XP_002262970.2| chr6 24763322 24770952 -
6 domain predictions
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Lj6g3v2130160.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase B120-like [Cicer arietinum] gi|502077547|ref|XP_004485683.1| chr6 24774235 24778227 +
6 domain predictions
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Lj6g3v2130160.2
n.a. Cysteine-rich receptor-like protein kinase [Medicago truncatula] gi|357446275|ref|XP_003593415.1| chr6 24774235 24778227 +
6 domain predictions
 –
Lj6g3v2132190.3
n.a. PREDICTED: receptor-like serine/threonine-protein kinase SD1-8-like [Cicer arietinum] gi|502077540|ref|XP_004485681.1| chr6 24794572 24800242 +
6 domain predictions
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Lj6g3v2132200.1
n.a. PREDICTED: receptor-like serine/threonine-protein kinase SD1-8-like [Cicer arietinum] gi|502077543|ref|XP_004485682.1| chr6 24800313 24804123 -
6 domain predictions
 –
Lj6g3v2132210.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like [Glycine max] gi|356546698|ref|XP_003541760.1| chr6 24805330 24809314 +
6 domain predictions
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LotjaGi1g1v0105500.2
n.a. Serine/threonine-protein kinase; TAIR: AT5G60900.1 receptor-like protein kinase 1; Swiss-Prot: sp|Q39202|RLK1_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase RLK1; TrEMBL-Plants: tr|A0A072V8H5|A0A072V8H5_MEDTR Lectin kinase family protein; Found in the gene: LotjaGi1g1v0105500 LjG1.1_chr1 16291367 16296641 +
5 domain predictions
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LotjaGi1g1v0202800.1
n.a. Serine/threonine-protein kinase; TAIR: AT4G27290.2 S-locus lectin protein kinase family protein; Swiss-Prot: sp|O81832|Y4729_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290; TrEMBL-Plants: tr|A0A151RGD5|A0A151RGD5_CAJCA Serine/threonine-protein kinase; Found in the gene: LotjaGi1g1v0202800 LjG1.1_chr1 43506426 43515606 -
5 domain predictions
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LotjaGi1g1v0358400.1
n.a. Serine/threonine-protein kinase; TAIR: AT2G19130.1 S-locus lectin protein kinase family protein; Swiss-Prot: sp|P17801|KPRO_MAIZE Putative receptor protein kinase ZmPK1; TrEMBL-Plants: tr|A0A1J7HQ17|A0A1J7HQ17_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0358400 LjG1.1_chr1 83317425 83320466 -
5 domain predictions
 –
LotjaGi1g1v0383500.1
n.a. Serine/threonine-protein kinase; TAIR: AT4G32300.1 S-domain-2 5; Swiss-Prot: sp|Q8RWZ5|SD25_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5; TrEMBL-Plants: tr|A0A0B2PCP7|A0A0B2PCP7_GLYSO Serine/threonine-protein kinase; Found in the gene: LotjaGi1g1v0383500 LjG1.1_chr1 86682535 86685832 +
5 domain predictions
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LotjaGi1g1v0383500.2
n.a. Serine/threonine-protein kinase; TAIR: AT4G32300.1 S-domain-2 5; Swiss-Prot: sp|Q8RWZ5|SD25_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5; TrEMBL-Plants: tr|A0A0B2PCP7|A0A0B2PCP7_GLYSO Serine/threonine-protein kinase; Found in the gene: LotjaGi1g1v0383500 LjG1.1_chr1 86682627 86685698 +
5 domain predictions
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LotjaGi1g1v0452500.1
n.a. Serine/threonine-protein kinase; TAIR: AT3G51710.1 D-mannose binding lectin protein with Apple-like carbohydrate-binding domain-containing protein; Swiss-Prot: sp|P17801|KPRO_MAIZE Putative receptor protein kinase ZmPK1; TrEMBL-Plants: tr|I1N359|I1N359_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0452500 LjG1.1_chr1 95277890 95280785 +
4 domain predictions
 –
LotjaGi1g1v0468400.1
n.a. Serine/threonine-protein kinase; TAIR: AT1G11330.2 S-locus lectin protein kinase family protein; Swiss-Prot: sp|Q9SXB8|Y1133_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330; TrEMBL-Plants: tr|A0A072TZ09|A0A072TZ09_MEDTR Serine/threonine-protein kinase; Found in the gene: LotjaGi1g1v0468400 LjG1.1_chr1 97887702 97891834 -
5 domain predictions
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LotjaGi1g1v0511500.1
n.a. Serine/threonine-protein kinase; TAIR: AT4G27290.2 S-locus lectin protein kinase family protein; Swiss-Prot: sp|O81832|Y4729_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290; TrEMBL-Plants: tr|I1KE68|I1KE68_SOYBN Serine/threonine-protein kinase; Found in the gene: LotjaGi1g1v0511500 LjG1.1_chr1 103320489 103325085 +
5 domain predictions
 –
LotjaGi1g1v0679700.1
n.a. Serine/threonine-protein kinase; TAIR: AT5G03700.1 D-mannose binding lectin protein with Apple-like carbohydrate-binding domain-containing protein; Swiss-Prot: sp|Q9LZR8|Y5370_ARATH PAN domain-containing protein At5g03700; TrEMBL-Plants: tr|A0A0L9U882|A0A0L9U882_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0679700 LjG1.1_chr1 124683101 124686205 -
4 domain predictions
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LotjaGi1g1v0720700.1
n.a. Serine/threonine-protein kinase; TAIR: AT2G41890.1 curculin-like (mannose-binding) lectin family protein / PAN domain-containing protein; Swiss-Prot: sp|P93756|SD31_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1; TrEMBL-Plants: tr|I1JNE6|I1JNE6_SOYBN Serine/threonine-protein kinase; Found in the gene: LotjaGi1g1v0720700 LjG1.1_chr1 129142550 129146631 -
5 domain predictions
 –
LotjaGi2g1v0002000.1
n.a. Serine/threonine-protein kinase; TAIR: AT1G34300.1 lectin protein kinase family protein; Swiss-Prot: sp|Q9XID3|Y1343_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300; TrEMBL-Plants: tr|I1KKX7|I1KKX7_SOYBN Serine/threonine-protein kinase; Found in the gene: LotjaGi2g1v0002000 LjG1.1_chr2 1157378 1160476 -
4 domain predictions
 –
LotjaGi2g1v0095300.1
n.a. Serine/threonine-protein kinase; TAIR: AT1G34300.1 lectin protein kinase family protein; Swiss-Prot: sp|Q9XID3|Y1343_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300; TrEMBL-Plants: tr|A0A072UJP6|A0A072UJP6_MEDTR Serine/threonine-protein kinase; Found in the gene: LotjaGi2g1v0095300 LjG1.1_chr2 31206318 31216416 -
4 domain predictions
 –
LotjaGi2g1v0095300.2
n.a. Serine/threonine-protein kinase; TAIR: AT1G34300.1 lectin protein kinase family protein; Swiss-Prot: sp|Q9XID3|Y1343_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300; TrEMBL-Plants: tr|A0A072UJP6|A0A072UJP6_MEDTR Serine/threonine-protein kinase; Found in the gene: LotjaGi2g1v0095300 LjG1.1_chr2 31208947 31216344 -
4 domain predictions
 –
LotjaGi2g1v0095300.3
n.a. Serine/threonine-protein kinase; TAIR: AT1G34300.1 lectin protein kinase family protein; Swiss-Prot: sp|Q9XID3|Y1343_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300; TrEMBL-Plants: tr|A0A072UJP6|A0A072UJP6_MEDTR Serine/threonine-protein kinase; Found in the gene: LotjaGi2g1v0095300 LjG1.1_chr2 31213218 31216341 -
4 domain predictions
 –
LotjaGi2g1v0196700.1
n.a. Serine/threonine-protein kinase; TAIR: AT5G60900.1 receptor-like protein kinase 1; Swiss-Prot: sp|Q39202|RLK1_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase RLK1; TrEMBL-Plants: tr|K7MDU4|K7MDU4_SOYBN Serine/threonine-protein kinase; Found in the gene: LotjaGi2g1v0196700 LjG1.1_chr2 63096252 63099601 -
4 domain predictions
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LotjaGi2g1v0346900.1
n.a. Serine/threonine-protein kinase; TAIR: AT4G27290.2 S-locus lectin protein kinase family protein; Swiss-Prot: sp|O81832|Y4729_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290; TrEMBL-Plants: tr|I1KE68|I1KE68_SOYBN Serine/threonine-protein kinase; Found in the gene: LotjaGi2g1v0346900 LjG1.1_chr2 82351436 82373304 -
5 domain predictions
 –
LotjaGi2g1v0346900.2
n.a. Serine/threonine-protein kinase; TAIR: AT4G27290.2 S-locus lectin protein kinase family protein; Swiss-Prot: sp|O81832|Y4729_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290; TrEMBL-Plants: tr|I1KE68|I1KE68_SOYBN Serine/threonine-protein kinase; Found in the gene: LotjaGi2g1v0346900 LjG1.1_chr2 82356313 82367452 -
5 domain predictions
 –
LotjaGi2g1v0346900.4
n.a. Serine/threonine-protein kinase; TAIR: AT4G27290.2 S-locus lectin protein kinase family protein; Swiss-Prot: sp|O81832|Y4729_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290; TrEMBL-Plants: tr|K7KXE1|K7KXE1_SOYBN Serine/threonine-protein kinase; Found in the gene: LotjaGi2g1v0346900 LjG1.1_chr2 82356313 82373228 -
5 domain predictions
 –
LotjaGi2g1v0420600.1
n.a. Serine/threonine-protein kinase; TAIR: AT5G60900.1 receptor-like protein kinase 1; Swiss-Prot: sp|Q25AG3|LERK3_ORYSI G-type lectin S-receptor-like serine/threonine-protein kinase LECRK3; TrEMBL-Plants: tr|I1LGT5|I1LGT5_SOYBN Serine/threonine-protein kinase; Found in the gene: LotjaGi2g1v0420600 LjG1.1_chr2 91855528 91859001 -
4 domain predictions
 –