Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR001708
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

Export options

Download the entire search result as a CSV file.

We have found 11 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.715s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0065769.1
n.a. PREDICTED: ALBINO3-like protein 1, chloroplastic-like [Glycine max] gi|356569211|ref|XP_003552798.1| chr0 22974369 22976427 +
3 domain predictions
2 GO terms
Lj0g3v0065789.1
n.a. PREDICTED: ALBINO3-like protein 1, chloroplastic-like [Glycine max] gi|356569211|ref|XP_003552798.1| chr0 22979000 22985188 +
3 domain predictions
2 GO terms
Lj0g3v0223399.1
n.a. PREDICTED: mitochondrial inner membrane protein OXA1-like [Glycine max] gi|356548765|ref|XP_003542770.1| chr0 115163139 115174137 -
3 domain predictions
2 GO terms
Lj1g3v2809410.1
n.a. PREDICTED: ALBINO3-like protein 2, chloroplastic-like [Glycine max] gi|356566939|ref|XP_003551682.1| chr1 32016940 32025830 -
2 domain predictions
2 GO terms
Lj1g3v2809410.2
n.a. PREDICTED: ALBINO3-like protein 2, chloroplastic-like [Glycine max] gi|356566939|ref|XP_003551682.1| chr1 32016940 32025830 -
2 domain predictions
2 GO terms
Lj3g3v3188540.1
n.a. PREDICTED: inner membrane protein PPF-1, chloroplastic-like [Glycine max] gi|356539022|ref|XP_003537999.1| chr3 39321755 39327590 -
3 domain predictions
2 GO terms
LotjaGi1g1v0483300.1
n.a. Membrane protein insertase YidC; TAIR: AT3G44370.1 Membrane insertion protein, OxaA/YidC with tetratricopeptide repeat domain-containing protein; Swiss-Prot: sp|Q0WUC5|ALB33_ARATH ALBINO3-like protein 3, mitochondrial; TrEMBL-Plants: tr|K7MUF6|K7MUF6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0483300 LjG1.1_chr1 99680283 99689591 +
2 domain predictions
2 GO terms
LotjaGi2g1v0178100.1
n.a. Membrane protein insertase YidC; TAIR: AT5G62050.1 inner membrane OXA1-like protein; Swiss-Prot: sp|Q42191|OXA1_ARATH Mitochondrial inner membrane protein OXA1; TrEMBL-Plants: tr|K7M0E7|K7M0E7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0178100 LjG1.1_chr2 59856686 59866878 -
3 domain predictions
2 GO terms
LotjaGi2g1v0178200_LC.1
n.a. Mitochondrial inner membrane protein OXA1; TAIR: AT5G62050.1 inner membrane OXA1-like protein; Swiss-Prot: sp|Q42191|OXA1_ARATH Mitochondrial inner membrane protein OXA1; TrEMBL-Plants: tr|A0A0R0J5G3|A0A0R0J5G3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0178200_LC LjG1.1_chr2 59872423 59874228 -
2 domain predictions
2 GO terms
LotjaGi2g1v0371800.1
n.a. Membrane protein insertase YidC; TAIR: AT2G28800.1 63 kDa inner membrane family protein; Swiss-Prot: sp|Q9FY06|PPF1_PEA Inner membrane protein PPF-1, chloroplastic; TrEMBL-Plants: tr|A0A0B2QQI6|A0A0B2QQI6_GLYSO Inner membrane protein PPF-1, chloroplastic; Found in the gene: LotjaGi2g1v0371800 LjG1.1_chr2 86859810 86867033 -
3 domain predictions
2 GO terms
LotjaGi6g1v0097300.1
n.a. Membrane protein insertase YidC; TAIR: AT1G24490.1 OxaA/YidC-like membrane insertion protein; Swiss-Prot: sp|Q9FYL3|ALB31_ARATH ALBINO3-like protein 1, chloroplastic; TrEMBL-Plants: tr|I1MYL3|I1MYL3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0097300 LjG1.1_chr6 21111124 21122309 -
3 domain predictions
2 GO terms