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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR002579
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 8 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 8.194s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj1g3v3789400.1
n.a. Uncharacterized protein TCM_035118 [Theobroma cacao] gi|508724400|gb|EOY16297.1| chr1 43359793 43361599 +
2 domain predictions
2 GO terms
Lj2g3v1648050.1
n.a. Uncharacterized protein TCM_000130 [Theobroma cacao] gi|508698851|gb|EOX90747.1| chr2 25762241 25763029 +
2 domain predictions
2 GO terms
Lj3g3v0421680.1
n.a. PREDICTED: peptide methionine sulfoxide reductase B1, chloroplastic-like [Cicer arietinum] gi|502166101|ref|XP_004513790.1| chr3 3654580 3657296 -
4 domain predictions
2 GO terms
Lj4g3v0409520.1
n.a. PREDICTED: peptide methionine sulfoxide reductase B2, chloroplastic-like [Cicer arietinum] gi|502142277|ref|XP_004504878.1| chr4 5240842 5243268 +
4 domain predictions
2 GO terms
Lj6g3v1901410.1
n.a. PREDICTED: peptide methionine sulfoxide reductase B3, chloroplastic-like [Cicer arietinum] gi|502078905|ref|XP_004486092.1| chr6 21321444 21322571 +
4 domain predictions
2 GO terms
LotjaGi3g1v0038500.1
n.a. Peptide methionine sulfoxide reductase msrB; TAIR: AT1G53670.1 methionine sulfoxide reductase B 1; Swiss-Prot: sp|Q9C8M2|MSRB1_ARATH Peptide methionine sulfoxide reductase B1, chloroplastic; TrEMBL-Plants: tr|I3SVJ6|I3SVJ6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0038500 LjG1.1_chr3 4152747 4156406 -
4 domain predictions
2 GO terms
LotjaGi4g1v0042500.1
n.a. Peptide methionine sulfoxide reductase msrB; TAIR: AT4G21860.1 methionine sulfoxide reductase B 2; Swiss-Prot: sp|Q9C5C8|MSRB2_ARATH Peptide methionine sulfoxide reductase B2, chloroplastic; TrEMBL-Plants: tr|I3T0F9|I3T0F9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0042500 LjG1.1_chr4 5008426 5011613 +
4 domain predictions
2 GO terms
LotjaGi6g1v0302700.1
n.a. Peptide methionine sulfoxide reductase msrB; TAIR: AT4G21860.1 methionine sulfoxide reductase B 2; Swiss-Prot: sp|Q10L32|MSRB5_ORYSJ Peptide methionine sulfoxide reductase B5; TrEMBL-Plants: tr|A0A0L9VEM3|A0A0L9VEM3_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0302700 LjG1.1_chr6 62005011 62006229 +
4 domain predictions
2 GO terms