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Lj6g3v1901410.1

Overview

Field Value
Gene ID Lj6g3v1901410
Transcript ID Lj6g3v1901410.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: peptide methionine sulfoxide reductase B3, chloroplastic-like [Cicer arietinum] gi|502078905|ref|XP_004486092.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Gene3D
G3DSA:2.170.150.20
4 133 130 3.90E-56
IPR002579
PANTHER
PTHR10173:SF19
7 135 129 5.70E-94 –
PANTHER
PTHR10173
7 135 129 5.70E-94
IPR028427
SUPERFAMILY
SSF51316
8 133 126 6.80E-48
IPR011057
TIGRFAM
TIGR00357
9 133 125 3.50E-39
IPR002579
Pfam
PF01641
13 131 119 1.00E-46
IPR002579

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0006979
Biological process Response to oxidative stress Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals.
Subterm of
GO:0016671
Molecular function Oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor Catalysis of an oxidation-reduction (redox) reaction in which a sulfur-containing group acts as a hydrogen or electron donor and reduces disulfide.
Subterm of
GO:0030091
Biological process Protein repair The process of restoring a protein to its original state after damage by such things as oxidation or spontaneous decomposition of residues.
Subterm of
GO:0033743
Molecular function Peptide-methionine (R)-S-oxide reductase activity Catalysis of the reaction: peptide-L-methionine + H(2)O + thioredoxin disulfide = peptide-L-methionine (R)-S-oxide + thioredoxin. Can act on oxidized methionine in peptide linkage with specificity for the R enantiomer. Thioredoxin disulfide is the oxidized form of thioredoxin.
Subterm of
GO:0055114
Biological process Oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
Subterm of

Genome browser

LORE1 insertions 1

Expression data

Expression pattern

Expression pattern of Lj6g3v1901410.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj6g3v1901410.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.