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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR003111
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 27 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.402s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0061709.1
n.a. PREDICTED: lon protease homolog 2, peroxisomal-like [Cicer arietinum] gi|502152569|ref|XP_004508987.1| chr0 20689338 20692540 -
3 domain predictions
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Lj0g3v0183909.1
n.a. PREDICTED: lon protease homolog 1, mitochondrial-like [Glycine max] gi|356533540|ref|XP_003535321.1| chr0 89371038 89383274 +
3 domain predictions
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Lj0g3v0312049.1
n.a. PREDICTED: LON peptidase N-terminal domain and RING finger protein 1-like [Glycine max] gi|356508525|ref|XP_003523006.1| chr0 162880309 162891154 +
3 domain predictions
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Lj0g3v0350409.1
n.a. PREDICTED: protein cereblon-like [Glycine max] gi|356510047|ref|XP_003523752.1| chr0 184139627 184145228 +
3 domain predictions
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Lj1g3v2138380.1
n.a. PREDICTED: lon protease 2-like [Cicer arietinum] gi|502131384|ref|XP_004500968.1| chr1 25654692 25655304 +
2 domain predictions
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Lj1g3v2139540.1
n.a. PREDICTED: lon protease 2-like [Cicer arietinum] gi|502131384|ref|XP_004500968.1| chr1 25690960 25691490 +
2 domain predictions
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Lj2g3v1988690.1
n.a. PREDICTED: lon protease homolog 2, peroxisomal-like [Cicer arietinum] gi|502160472|ref|XP_004511756.1| chr2 29475390 29484392 -
3 domain predictions
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Lj2g3v1988690.2
n.a. PREDICTED: lon protease homolog 2, peroxisomal-like [Cicer arietinum] gi|502160472|ref|XP_004511756.1| chr2 29475390 29483748 -
3 domain predictions
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Lj3g3v1309440.1
n.a. PREDICTED: lon protease 2-like [Glycine max] gi|356510000|ref|XP_003523729.1| chr3 16939757 16940590 +
2 domain predictions
 –
LotjaGi1g1v0194200.1
n.a. RING finger protein 141; TAIR: AT1G18660.1 zinc finger (C3HC4-type RING finger) family protein; Swiss-Prot: sp|D3YY23|LONF1_MOUSE LON peptidase N-terminal domain and RING finger protein 1; TrEMBL-Plants: tr|K7KKL8|K7KKL8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0194200 LjG1.1_chr1 38489712 38501349 -
4 domain predictions
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LotjaGi1g1v0409100.1
n.a. ATP-dependent protease LA (Lon) domain protein; TAIR: AT2G25740.1 ATP-dependent protease La (LON) domain protein; Swiss-Prot: sp|Q68EH9|CRBN_DANRE Protein cereblon; TrEMBL-Plants: tr|A0A0L9UH25|A0A0L9UH25_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0409100 LjG1.1_chr1 89954280 89960967 -
4 domain predictions
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LotjaGi2g1v0417300.1
n.a. Lon protease homolog; TAIR: AT5G47040.1 lon protease 2; Swiss-Prot: sp|O04979|LONP2_SPIOL Lon protease homolog 2, peroxisomal; TrEMBL-Plants: tr|G7JYP5|G7JYP5_MEDTR Lon protease homolog 2, peroxisomal; Found in the gene: LotjaGi2g1v0417300 LjG1.1_chr2 91535529 91544712 -
4 domain predictions
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LotjaGi2g1v0417300.4
n.a. Lon protease homolog; TAIR: AT5G47040.1 lon protease 2; Swiss-Prot: sp|O04979|LONP2_SPIOL Lon protease homolog 2, peroxisomal; TrEMBL-Plants: tr|G7JYP5|G7JYP5_MEDTR Lon protease homolog 2, peroxisomal; Found in the gene: LotjaGi2g1v0417300 LjG1.1_chr2 91536456 91544517 -
4 domain predictions
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LotjaGi3g1v0189200_LC.1
n.a. Lon protease; TAIR: AT1G75460.1 ATP-dependent protease La (LON) domain protein; Swiss-Prot: sp|Q2IIK1|LON_ANADE Lon protease; TrEMBL-Plants: tr|I1JT74|I1JT74_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0189200_LC LjG1.1_chr3 27172637 27173217 +
3 domain predictions
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LotjaGi3g1v0292700_LC.1
n.a. Lon protease homolog; TAIR: AT1G75460.1 ATP-dependent protease La (LON) domain protein; Swiss-Prot: sp|Q2IIK1|LON_ANADE Lon protease; TrEMBL-Plants: tr|I1JT74|I1JT74_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0292700_LC LjG1.1_chr3 59664340 59664711 +
3 domain predictions
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LotjaGi4g1v0164900.1
n.a. ATP-dependent protease LA (Lon) domain protein; TAIR: AT2G25740.1 ATP-dependent protease La (LON) domain protein; Swiss-Prot: sp|Q68EH9|CRBN_DANRE Protein cereblon; TrEMBL-Plants: tr|A0A1J7I6V9|A0A1J7I6V9_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0164900 LjG1.1_chr4 31060127 31070924 -
4 domain predictions
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LotjaGi4g1v0164900.2
n.a. Protein cereblon; TAIR: AT2G25740.1 ATP-dependent protease La (LON) domain protein; Swiss-Prot: sp|Q68EH9|CRBN_DANRE Protein cereblon; TrEMBL-Plants: tr|G7I262|G7I262_MEDTR ATP-dependent protease LA (Lon) domain protein; Found in the gene: LotjaGi4g1v0164900 LjG1.1_chr4 31060436 31070919 -
2 domain predictions
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LotjaGi4g1v0191600.1
n.a. Lon protease homolog; TAIR: AT5G47040.1 lon protease 2; Swiss-Prot: sp|O04979|LONP2_SPIOL Lon protease homolog 2, peroxisomal; TrEMBL-Plants: tr|A0A072UQE3|A0A072UQE3_MEDTR Lon protease homolog 2, peroxisomal; Found in the gene: LotjaGi4g1v0191600 LjG1.1_chr4 43834838 43847605 -
4 domain predictions
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LotjaGi4g1v0191600.3
n.a. Lon protease homolog; TAIR: AT5G47040.1 lon protease 2; Swiss-Prot: sp|O04979|LONP2_SPIOL Lon protease homolog 2, peroxisomal; TrEMBL-Plants: tr|A0A072UQE3|A0A072UQE3_MEDTR Lon protease homolog 2, peroxisomal; Found in the gene: LotjaGi4g1v0191600 LjG1.1_chr4 43836091 43847450 -
4 domain predictions
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LotjaGi4g1v0191600.5
n.a. Lon protease homolog; TAIR: AT5G47040.1 lon protease 2; Swiss-Prot: sp|O04979|LONP2_SPIOL Lon protease homolog 2, peroxisomal; TrEMBL-Plants: tr|A0A072UQE3|A0A072UQE3_MEDTR Lon protease homolog 2, peroxisomal; Found in the gene: LotjaGi4g1v0191600 LjG1.1_chr4 43836091 43847450 -
4 domain predictions
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LotjaGi4g1v0191600.6
n.a. Lon protease homolog; TAIR: AT5G47040.1 lon protease 2; Swiss-Prot: sp|O04979|LONP2_SPIOL Lon protease homolog 2, peroxisomal; TrEMBL-Plants: tr|A0A072UQE3|A0A072UQE3_MEDTR Lon protease homolog 2, peroxisomal; Found in the gene: LotjaGi4g1v0191600 LjG1.1_chr4 43837467 43847450 -
4 domain predictions
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LotjaGi4g1v0191600.7
n.a. Lon protease homolog; TAIR: AT5G47040.1 lon protease 2; Swiss-Prot: sp|O04979|LONP2_SPIOL Lon protease homolog 2, peroxisomal; TrEMBL-Plants: tr|A0A072UQE3|A0A072UQE3_MEDTR Lon protease homolog 2, peroxisomal; Found in the gene: LotjaGi4g1v0191600 LjG1.1_chr4 43837478 43847450 -
4 domain predictions
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LotjaGi5g1v0229900.1
n.a. Lon protease homolog; TAIR: AT5G26860.1 lon protease 1; Swiss-Prot: sp|P93648|LONM_MAIZE Lon protease homolog, mitochondrial; TrEMBL-Plants: tr|A0A0S3SQJ4|A0A0S3SQJ4_PHAAN Lon protease homolog, mitochondrial; Found in the gene: LotjaGi5g1v0229900 LjG1.1_chr5 53721943 53734796 -
4 domain predictions
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LotjaGi5g1v0229900.2
n.a. Lon protease homolog; TAIR: AT5G26860.1 lon protease 1; Swiss-Prot: sp|P93648|LONM_MAIZE Lon protease homolog, mitochondrial; TrEMBL-Plants: tr|A0A0S3SQJ4|A0A0S3SQJ4_PHAAN Lon protease homolog, mitochondrial; Found in the gene: LotjaGi5g1v0229900 LjG1.1_chr5 53722508 53734605 -
4 domain predictions
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LotjaGi5g1v0229900.3
n.a. Lon protease homolog; TAIR: AT5G26860.1 lon protease 1; Swiss-Prot: sp|P93648|LONM_MAIZE Lon protease homolog, mitochondrial; TrEMBL-Plants: tr|A0A0S3SQJ4|A0A0S3SQJ4_PHAAN Lon protease homolog, mitochondrial; Found in the gene: LotjaGi5g1v0229900 LjG1.1_chr5 53723015 53733659 -
4 domain predictions
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LotjaGi5g1v0229900.4
n.a. Lon protease homolog; TAIR: AT5G26860.1 lon protease 1; Swiss-Prot: sp|P93648|LONM_MAIZE Lon protease homolog, mitochondrial; TrEMBL-Plants: tr|A0A0S3SQJ4|A0A0S3SQJ4_PHAAN Lon protease homolog, mitochondrial; Found in the gene: LotjaGi5g1v0229900 LjG1.1_chr5 53723079 53733396 -
4 domain predictions
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LotjaGi5g1v0229900.5
n.a. Lon protease homolog; TAIR: AT5G26860.1 lon protease 1; Swiss-Prot: sp|P93648|LONM_MAIZE Lon protease homolog, mitochondrial; TrEMBL-Plants: tr|A0A0S3SQJ4|A0A0S3SQJ4_PHAAN Lon protease homolog, mitochondrial; Found in the gene: LotjaGi5g1v0229900 LjG1.1_chr5 53723088 53734409 -
4 domain predictions
 –