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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0312049 |
| Transcript ID | Lj0g3v0312049.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: LON peptidase N-terminal domain and RING finger protein 1-like [Glycine max] gi|356508525|ref|XP_003523006.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 11 | 489 | 479 | 3.80E-205 | – | |
| PANTHER | 11 | 489 | 479 | 3.80E-205 | – | |
| SUPERFAMILY | 40 | 172 | 133 | 2.60E-15 | ||
| SMART | 41 | 74 | 34 | 60 | ||
| Gene3D | 42 | 176 | 135 | 4.10E-18 | ||
| SMART | 132 | 165 | 34 | 2 | ||
| Gene3D | 187 | 264 | 78 | 6.20E-20 | ||
| SUPERFAMILY | 193 | 262 | 70 | 3.95E-17 | – | |
| CDD | 198 | 240 | 43 | 1.14E-10 | – | |
| Pfam | 199 | 236 | 38 | 6.20E-11 | – | |
| SMART | 199 | 236 | 38 | 3.40E-07 | ||
| ProSiteProfiles | 199 | 237 | 39 | 12.902 | ||
| ProSitePatterns | 214 | 223 | 10 | – | ||
| SMART | 282 | 481 | 200 | 3.90E-17 | ||
| SUPERFAMILY | 283 | 479 | 197 | 3.23E-38 | ||
| Pfam | 283 | 480 | 198 | 1.30E-23 | ||
| Coils | 411 | 431 | 21 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj0g3v0312049.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0312049.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.