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| Field | Value |
|---|---|
| Gene ID | Lj2g3v1988690 |
| Transcript ID | Lj2g3v1988690.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: lon protease homolog 2, peroxisomal-like [Cicer arietinum] gi|502160472|ref|XP_004511756.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Hamap | 1 | 860 | 860 | 51.327 | ||
| SMART | 5 | 226 | 222 | 3.60E-09 | ||
| PANTHER | 8 | 47 | 40 | 0 | – | |
| PANTHER | 8 | 47 | 40 | 0 | ||
| Pfam | 9 | 226 | 218 | 1.80E-13 | ||
| MobiDBLite | 40 | 69 | 30 | – | – | |
| TIGRFAM | 61 | 848 | 788 | 2.10E-294 | ||
| PANTHER | 79 | 853 | 775 | 0 | ||
| PANTHER | 79 | 853 | 775 | 0 | – | |
| Coils | 261 | 281 | 21 | – | – | |
| SUPERFAMILY | 325 | 591 | 267 | 2.90E-49 | ||
| Gene3D | 332 | 525 | 194 | 1.90E-34 | ||
| CDD | 358 | 519 | 162 | 3.83E-14 | – | |
| SMART | 373 | 518 | 146 | 9.70E-12 | ||
| Pfam | 377 | 514 | 138 | 2.20E-21 | ||
| PRINTS | 381 | 400 | 20 | 1.70E-49 | – | |
| Gene3D | 526 | 588 | 63 | 2.00E-26 | – | |
| Gene3D | 635 | 656 | 22 | 2.00E-26 | – | |
| Pfam | 642 | 849 | 208 | 2.20E-76 | ||
| Gene3D | 664 | 848 | 185 | 1.20E-63 | ||
| SUPERFAMILY | 668 | 847 | 180 | 9.86E-48 | ||
| PRINTS | 668 | 684 | 17 | 1.70E-49 | – | |
| PRINTS | 750 | 769 | 20 | 1.70E-49 | – | |
| ProSitePatterns | 753 | 761 | 9 | – | ||
| PRINTS | 780 | 799 | 20 | 1.70E-49 | – | |
| PRINTS | 803 | 821 | 19 | 1.70E-49 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP-dependent peptidase activity | Catalysis of the reaction: ATP + H2O = ADP + phosphate, to drive the hydrolysis of peptide bonds. | ||
| Molecular function | Serine-type endopeptidase activity | Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Proteolysis | The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds. | ||
| Biological process | Protein quality control for misfolded or incompletely synthesized proteins | The chemical reactions and pathways resulting in the breakdown of misfolded or attenuated proteins. | ||
| Biological process | Protein catabolic process | The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds. |
Expression pattern of Lj2g3v1988690.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v1988690.2, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.