Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR004143
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

Export options

Download the entire search result as a CSV file.

We have found 13 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.780s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0086109.1
n.a. PREDICTED: biotin--protein ligase-like [Cicer arietinum] gi|502130276|ref|XP_004500594.1| chr0 34651978 34652715 -
3 domain predictions
1 GO term
Lj0g3v0203999.2
n.a. Holocarboxylase synthetase hcs2 [Medicago truncatula] gi|357461633|ref|XP_003601098.1| chr0 101142099 101143895 -
3 domain predictions
1 GO term
Lj1g3v1603220.1
n.a. PREDICTED: plastidial lipoyltransferase 2-like [Glycine max] gi|356509700|ref|XP_003523584.1| chr1 19238342 19239021 +
3 domain predictions
1 GO term
Lj1g3v2979150.1
n.a. Lipoate protein ligase-like protein [Medicago truncatula] gi|357501933|ref|XP_003621255.1| chr1 33802110 33808464 +
2 domain predictions
1 GO term
Lj5g3v2099470.1
n.a. PREDICTED: octanoyltransferase-like [Cicer arietinum] gi|502120173|ref|XP_004496872.1| chr5 30007671 30009168 +
3 domain predictions
1 GO term
LotjaGi1g1v0254100.1
n.a. Biotin holocarboxylase synthetase 1-like protein; TAIR: AT2G25710.1 holocarboxylase synthase 1; Swiss-Prot: sp|Q9SL92|HCS1_ARATH Biotin--protein ligase 1, chloroplastic; TrEMBL-Plants: tr|G7J3L5|G7J3L5_MEDTR Biotin holocarboxylase synthetase, putative; Found in the gene: LotjaGi1g1v0254100 LjG1.1_chr1 61193480 61204935 +
3 domain predictions
1 GO term
LotjaGi1g1v0504900.1
n.a. Lipoate-protein ligase A; TAIR: AT3G29010.1 Biotin/lipoate A/B protein ligase family; Swiss-Prot: sp|P47512|LPLA_MYCGE Probable lipoate-protein ligase A; TrEMBL-Plants: tr|V7B115|V7B115_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0504900 LjG1.1_chr1 102283358 102289620 +
2 domain predictions
1 GO term
LotjaGi1g1v0504900.2
n.a. Lipoate-protein ligase A; TAIR: AT3G29010.4 Biotin/lipoate A/B protein ligase family; Swiss-Prot: sp|O13629|LPLA_SCHPO Putative lipoate-protein ligase A; TrEMBL-Plants: tr|K7LFQ5|K7LFQ5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0504900 LjG1.1_chr1 102286702 102288620 +
2 domain predictions
1 GO term
LotjaGi1g1v0504900.3
n.a. Lipoate-protein ligase A; TAIR: AT3G29010.1 Biotin/lipoate A/B protein ligase family; Swiss-Prot: sp|P47512|LPLA_MYCGE Probable lipoate-protein ligase A; TrEMBL-Plants: tr|V7B115|V7B115_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0504900 LjG1.1_chr1 102286702 102289242 +
2 domain predictions
1 GO term
LotjaGi1g1v0504900.4
n.a. Lipoate-protein ligase A; TAIR: AT3G29010.1 Biotin/lipoate A/B protein ligase family; Swiss-Prot: sp|P47512|LPLA_MYCGE Probable lipoate-protein ligase A; TrEMBL-Plants: tr|V7B115|V7B115_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0504900 LjG1.1_chr1 102286702 102289242 +
2 domain predictions
1 GO term
LotjaGi5g1v0321900.1
n.a. Octanoyltransferase; TAIR: AT1G04640.1 lipoyltransferase 2; Swiss-Prot: sp|Q9SXP7|LIPB_ARATH Octanoyltransferase; TrEMBL-Plants: tr|A0A072VQE6|A0A072VQE6_MEDTR Biotin/lipoate A/B protein ligase family protein; Found in the gene: LotjaGi5g1v0321900 LjG1.1_chr5 64057435 64069121 +
3 domain predictions
1 GO term
LotjaGi5g1v0321900.2
n.a. Octanoyltransferase; TAIR: AT1G04640.1 lipoyltransferase 2; Swiss-Prot: sp|Q9SXP7|LIPB_ARATH Octanoyltransferase; TrEMBL-Plants: tr|A0A072VQE6|A0A072VQE6_MEDTR Biotin/lipoate A/B protein ligase family protein; Found in the gene: LotjaGi5g1v0321900 LjG1.1_chr5 64057435 64069148 +
3 domain predictions
1 GO term
LotjaGi5g1v0321900.3
n.a. Octanoyltransferase; TAIR: AT1G04640.1 lipoyltransferase 2; Swiss-Prot: sp|Q9SXP7|LIPB_ARATH Octanoyltransferase; TrEMBL-Plants: tr|A0A072VQE6|A0A072VQE6_MEDTR Biotin/lipoate A/B protein ligase family protein; Found in the gene: LotjaGi5g1v0321900 LjG1.1_chr5 64068246 64068953 +
3 domain predictions
1 GO term