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Lj5g3v2099470.1

Overview

Field Value
Gene ID Lj5g3v2099470
Transcript ID Lj5g3v2099470.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: octanoyltransferase-like [Cicer arietinum] gi|502120173|ref|XP_004496872.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR10993:SF7
1 230 230 5.40E-128 –
PANTHER
PTHR10993
1 230 230 5.40E-128 –
PIRSF
PIRSF016262
2 223 222 1.60E-61
IPR000544
Gene3D
G3DSA:3.90.1550.10
5 214 210 1.50E-62 –
Hamap
MF_00013
6 217 212 29.711
IPR000544
SUPERFAMILY
SSF55681
6 216 211 4.31E-54 –
TIGRFAM
TIGR00214
34 215 182 6.50E-44
IPR000544
ProSiteProfiles
PS51733
34 218 185 58.94
IPR004143
Pfam
PF03099
53 168 116 3.80E-08
IPR004143
ProSitePatterns
PS01313
79 94 16 –
IPR020605
ProDom
PD006086
83 128 46 2.00E-14 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0006464
Biological process Cellular protein modification process The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications) occurring at the level of an individual cell. Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification).
Subterm of
GO:0009249
Biological process Protein lipoylation The lipoylation of peptidyl-lysine to form peptidyl-N6-lipoyl-L-lysine.
Subterm of
GO:0033819
Molecular function Lipoyl(octanoyl) transferase activity Catalysis of the reaction: octanoyl-[acyl-carrier protein] + protein = protein N6-(octanoyl)lysine + acyl-carrier protein.
Subterm of

Genome browser

LORE1 insertions 3

Expression data

Expression pattern

Expression pattern of Lj5g3v2099470.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj5g3v2099470.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.