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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR004193
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We have found 23 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.542s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0276889.1
n.a. PREDICTED: 1,4-alpha-glucan-branching enzyme-like isoform X1 [Cicer arietinum] gi|502131109|ref|XP_004500878.1| chr0 143719711 143726899 +
2 domain predictions
2 GO terms
Lj0g3v0304069.1
n.a. PREDICTED: isoamylase 2, chloroplastic-like [Cicer arietinum] gi|502109456|ref|XP_004493650.1| chr0 158384972 158388880 +
2 domain predictions
2 GO terms
Lj1g3v1525840.1
n.a. PREDICTED: isoamylase 3, chloroplastic-like [Glycine max] gi|356508064|ref|XP_003522781.1| chr1 18026113 18043150 +
2 domain predictions
2 GO terms
Lj1g3v2294860.1
n.a. PREDICTED: 1,4-alpha-glucan-branching enzyme-like [Glycine max] gi|356508675|ref|XP_003523080.1| chr1 26888280 26896538 -
2 domain predictions
2 GO terms
Lj1g3v4699750.1
n.a. starch branching enzyme I [Pisum sativum] gi|1345570|emb|CAA56319.1| chr1 56048407 56065886 -
2 domain predictions
2 GO terms
Lj4g3v3015110.2
n.a. isoamylase-type starch-debranching enzyme 1 [Phaseolus vulgaris] gi|139867053|dbj|BAF52941.1| chr4 40347548 40356591 -
2 domain predictions
2 GO terms
Lj5g3v1698870.1
n.a. PREDICTED: pullulanase 1, chloroplastic-like isoform X1 [Cicer arietinum] gi|502118156|ref|XP_004496127.1| chr5 24455122 24467633 +
2 domain predictions
2 GO terms
Lj6g3v0856590.1
n.a. PREDICTED: 1,4-alpha-glucan-branching enzyme 3, chloroplastic/amyloplastic-like [Cicer arietinum] gi|502166385|ref|XP_004513877.1| chr6 8507947 8513527 +
2 domain predictions
2 GO terms
LotjaGi1g1v0340200.1
n.a. 1,4-alpha-glucan branching enzyme GlgB; TAIR: AT4G09020.1 isoamylase 3; Swiss-Prot: sp|Q9M0S5|ISOA3_ARATH Isoamylase 3, chloroplastic; TrEMBL-Plants: tr|K7KJ81|K7KJ81_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0340200 LjG1.1_chr1 80194788 80213665 +
2 domain predictions
2 GO terms
LotjaGi1g1v0340200.2
n.a. 1,4-alpha-glucan branching enzyme GlgB; TAIR: AT4G09020.1 isoamylase 3; Swiss-Prot: sp|Q9M0S5|ISOA3_ARATH Isoamylase 3, chloroplastic; TrEMBL-Plants: tr|K7KU93|K7KU93_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0340200 LjG1.1_chr1 80196144 80212053 +
2 domain predictions
2 GO terms
LotjaGi1g1v0340200.3
n.a. 1,4-alpha-glucan branching enzyme GlgB; TAIR: AT4G09020.1 isoamylase 3; Swiss-Prot: sp|Q9M0S5|ISOA3_ARATH Isoamylase 3, chloroplastic; TrEMBL-Plants: tr|K7KJ81|K7KJ81_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0340200 LjG1.1_chr1 80196310 80212053 +
2 domain predictions
2 GO terms
LotjaGi1g1v0436100.1
n.a. 1,4-alpha-glucan-branching enzyme; TAIR: AT5G03650.1 starch branching enzyme 2.2; Swiss-Prot: sp|Q41059|GLGB2_PEA 1,4-alpha-glucan-branching enzyme 1, chloroplastic/amyloplastic; TrEMBL-Plants: tr|K7KHN1|K7KHN1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0436100 LjG1.1_chr1 93032485 93042507 -
2 domain predictions
2 GO terms
LotjaGi1g1v0436100.2
n.a. 1,4-alpha-glucan-branching enzyme; TAIR: AT5G03650.1 starch branching enzyme 2.2; Swiss-Prot: sp|Q41059|GLGB2_PEA 1,4-alpha-glucan-branching enzyme 1, chloroplastic/amyloplastic; TrEMBL-Plants: tr|X5CRZ1|X5CRZ1_LENCU Starch branching protein I; Found in the gene: LotjaGi1g1v0436100 LjG1.1_chr1 93034783 93040981 -
2 domain predictions
2 GO terms
LotjaGi1g1v0678900.1
n.a. 1,4-alpha-glucan-branching enzyme; TAIR: AT5G03650.1 starch branching enzyme 2.2; Swiss-Prot: sp|Q41058|GLGB1_PEA 1,4-alpha-glucan-branching enzyme 1, chloroplastic/amyloplastic; TrEMBL-Plants: tr|A0A072U332|A0A072U332_MEDTR Starch branching enzyme I; Found in the gene: LotjaGi1g1v0678900 LjG1.1_chr1 124552674 124574880 +
2 domain predictions
2 GO terms
LotjaGi1g1v0678900.2
n.a. 1,4-alpha-glucan-branching enzyme; TAIR: AT5G03650.1 starch branching enzyme 2.2; Swiss-Prot: sp|Q41058|GLGB1_PEA 1,4-alpha-glucan-branching enzyme 1, chloroplastic/amyloplastic; TrEMBL-Plants: tr|A0A072U332|A0A072U332_MEDTR Starch branching enzyme I; Found in the gene: LotjaGi1g1v0678900 LjG1.1_chr1 124552679 124575427 +
2 domain predictions
2 GO terms
LotjaGi1g1v0678900.3
n.a. 1,4-alpha-glucan-branching enzyme; TAIR: AT5G03650.1 starch branching enzyme 2.2; Swiss-Prot: sp|Q41058|GLGB1_PEA 1,4-alpha-glucan-branching enzyme 1, chloroplastic/amyloplastic; TrEMBL-Plants: tr|X5CLX6|X5CLX6_LENCU Starch branching protein II; Found in the gene: LotjaGi1g1v0678900 LjG1.1_chr1 124554237 124569667 +
2 domain predictions
2 GO terms
LotjaGi1g1v0729900.1
n.a. Debranching enzyme 1; TAIR: AT1G03310.1 debranching enzyme 1; Swiss-Prot: sp|Q8L735|ISOA2_ARATH Isoamylase 2, chloroplastic; TrEMBL-Plants: tr|K7MYJ2|K7MYJ2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0729900 LjG1.1_chr1 130161358 130172659 +
2 domain predictions
2 GO terms
LotjaGi1g1v0729900.5
n.a. Debranching enzyme 1; TAIR: AT1G03310.1 debranching enzyme 1; Swiss-Prot: sp|Q8L735|ISOA2_ARATH Isoamylase 2, chloroplastic; TrEMBL-Plants: tr|K7MYJ2|K7MYJ2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0729900 LjG1.1_chr1 130162755 130172659 +
2 domain predictions
2 GO terms
LotjaGi4g1v0440200.1
n.a. 1,4-alpha-glucan branching enzyme GlgB; TAIR: AT2G39930.1 isoamylase 1; Swiss-Prot: sp|O04196|ISOA1_ARATH Isoamylase 1, chloroplastic; TrEMBL-Plants: tr|A0A151TKF6|A0A151TKF6_CAJCA Uncharacterized protein; Found in the gene: LotjaGi4g1v0440200 LjG1.1_chr4 81377632 81386749 -
2 domain predictions
2 GO terms
LotjaGi4g1v0440200.3
n.a. 1,4-alpha-glucan branching enzyme GlgB; TAIR: AT2G39930.1 isoamylase 1; Swiss-Prot: sp|O04196|ISOA1_ARATH Isoamylase 1, chloroplastic; TrEMBL-Plants: tr|A0A151TKF6|A0A151TKF6_CAJCA Uncharacterized protein; Found in the gene: LotjaGi4g1v0440200 LjG1.1_chr4 81377927 81385369 -
2 domain predictions
2 GO terms
LotjaGi5g1v0254800.1
n.a. 1,4-alpha-glucan branching enzyme GlgB; TAIR: AT5G04360.1 limit dextrinase; Swiss-Prot: sp|Q8GTR4|PULA1_ARATH Pullulanase 1, chloroplastic; TrEMBL-Plants: tr|A0A072VMS0|A0A072VMS0_MEDTR Alpha-1,6-glucosidase, pullulanase-type protein; Found in the gene: LotjaGi5g1v0254800 LjG1.1_chr5 56370521 56384087 -
2 domain predictions
2 GO terms
LotjaGi5g1v0254800.2
n.a. Debranching enzyme 1; TAIR: AT5G04360.1 limit dextrinase; Swiss-Prot: sp|Q8GTR4|PULA1_ARATH Pullulanase 1, chloroplastic; TrEMBL-Plants: tr|A0A072VMS0|A0A072VMS0_MEDTR Alpha-1,6-glucosidase, pullulanase-type protein; Found in the gene: LotjaGi5g1v0254800 LjG1.1_chr5 56370521 56384103 -
2 domain predictions
2 GO terms
LotjaGi6g1v0156000.3
n.a. 1,4-alpha-glucan branching enzyme, putative; TAIR: AT3G20440.2 Alpha amylase family protein; Swiss-Prot: sp|D2WL32|GLGB3_ARATH 1,4-alpha-glucan-branching enzyme 3, chloroplastic/amyloplastic; TrEMBL-Plants: tr|K7MQT1|K7MQT1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0156000 LjG1.1_chr6 43547583 43566153 +
2 domain predictions
2 GO terms