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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR004516
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 9 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.673s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj1g3v4591200.1
n.a. PREDICTED: histidyl-tRNA synthetase-like [Glycine max] gi|356505252|ref|XP_003521406.1| chr1 54981260 54992780 +
3 domain predictions
1 GO term
Lj4g3v3112980.1
n.a. PREDICTED: histidine--tRNA ligase-like [Cicer arietinum] gi|502122299|ref|XP_004497677.1| chr4 41487075 41493855 -
2 domain predictions
1 GO term
Lj5g3v0656970.1
n.a. PREDICTED: histidyl-tRNA synthetase-like [Glycine max] gi|356505252|ref|XP_003521406.1| chr5 8976775 8984120 -
3 domain predictions
1 GO term
Lj5g3v0656990.1
n.a. PREDICTED: histidine--tRNA ligase-like isoform X2 [Cicer arietinum] gi|502111238|ref|XP_004493995.1| chr5 8985722 8988300 -
2 domain predictions
1 GO term
LotjaGi1g1v0688700.1
n.a. Histidine--tRNA ligase; TAIR: AT3G46100.1 Histidyl-tRNA synthetase 1; Swiss-Prot: sp|O82413|SYHM_ARATH Histidine--tRNA ligase, chloroplastic/mitochondrial; TrEMBL-Plants: tr|I1JPP8|I1JPP8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0688700 LjG1.1_chr1 125607215 125627467 -
3 domain predictions
1 GO term
LotjaGi1g1v0688700.2
n.a. Histidine--tRNA ligase; TAIR: AT3G46100.1 Histidyl-tRNA synthetase 1; Swiss-Prot: sp|O82413|SYHM_ARATH Histidine--tRNA ligase, chloroplastic/mitochondrial; TrEMBL-Plants: tr|K7KFU0|K7KFU0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0688700 LjG1.1_chr1 125615819 125627346 -
3 domain predictions
1 GO term
LotjaGi1g1v0688700.3
n.a. Histidine--tRNA ligase; TAIR: AT3G46100.1 Histidyl-tRNA synthetase 1; Swiss-Prot: sp|O82413|SYHM_ARATH Histidine--tRNA ligase, chloroplastic/mitochondrial; TrEMBL-Plants: tr|I1JPP8|I1JPP8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0688700 LjG1.1_chr1 125615819 125627346 -
3 domain predictions
1 GO term
LotjaGi1g1v0688700.4
n.a. Histidine--tRNA ligase; TAIR: AT3G46100.1 Histidyl-tRNA synthetase 1; Swiss-Prot: sp|O82413|SYHM_ARATH Histidine--tRNA ligase, chloroplastic/mitochondrial; TrEMBL-Plants: tr|I1JPP8|I1JPP8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0688700 LjG1.1_chr1 125615819 125627346 -
3 domain predictions
1 GO term
LotjaGi1g1v0688700.5
n.a. Histidine--tRNA ligase; TAIR: AT3G46100.1 Histidyl-tRNA synthetase 1; Swiss-Prot: sp|O82413|SYHM_ARATH Histidine--tRNA ligase, chloroplastic/mitochondrial; TrEMBL-Plants: tr|K7KFU0|K7KFU0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0688700 LjG1.1_chr1 125618349 125627346 -
2 domain predictions
1 GO term