Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0688700 |
| Transcript ID | LotjaGi1g1v0688700.2 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Histidine--tRNA ligase; TAIR: AT3G46100.1 Histidyl-tRNA synthetase 1; Swiss-Prot: sp|O82413|SYHM_ARATH Histidine--tRNA ligase, chloroplastic/mitochondrial; TrEMBL-Plants: tr|K7KFU0|K7KFU0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0688700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:125615819..125627346) extracted from Lotus japonicus Gifu genome v1.2.
ATGCCTGCAACTCCACTATCATCTTCCTTCCTCACCCTGCAACCGCGCTTCAACTCCTACATCAACCCTCTCTTCCGTTC ACTCACCTACCAACTCAATGGCAACTTCTCCACAGTCAGACTCCACTCCGCACTTCCCGGCGCGGCGGAGACCGACTCTC CCACCGGCGGCCGAACCGGCGCCTTAACTCCCGGCCCTTCTGTCCCCCGTGACGTGCAGAAAATCGACGTCAACCCTCCC AAGGGGACACGTGACTTCCCGCCTGAAGACATGCGCTTGCGCAACTGGCTCTTCAACCATTTCAAAGAGGTATCCGTGTG TACTCAATTTGCTCATGCTCAATGTTATGCTGCTTGATTCATGGTTTTGAATGTTAAGAATATGATTTTTTCATCTGGGT CGTTGCGAGTTTCAGGTTTCACGGTTGTATGGATTTGAGGAGGTTGATTTTCCAGTGCTTGAGTCGGAGGCATTGTATAC TAGGAAAGCAGGGGAGGAGATTAAGGACCAGGTAACCATTTTCTTCACTTCACTGTTCCCTTTACCATGAGAAGCTGAGC TAGTGCATAGGTACATAGAGGTGATGCATTTATAGGTTATTCTAGCCTGGTCAATTTATGTGGGTTTGATTGAATTTTCG CTCCAGCCACGATTGCTTATTTTACTTTTAGTTGAGTCCACTATACCTCATATTTATATTATTTCAAGGTCATGGCAATA TTCAAGTTAATGAATGAAAGAGAAAATATAAATTTTTAGTCAAAAAGCAAGTAGAAAGAGAATAATCAACCGTTGCTTAA ATAAGCAATGTTGCTAAAATTTACGCAACAAGAACTGCCACGTCATGTTGCTCCAAAATAAGCAATGCTGCTTAAGTGCT CCAACTGAATTAAGCAACCTCCATTGGAGATGCTCTTACTTGTGTACGACTGTGACATAAACCCATCAGCCTTATTTGCG GGGATAAATGATATCAGTGGGCAATGCGGATGTTAATTTTGCCCCATTTGTTGGTTTAACATTCCTTGTGTCAAGCTTAT GTTTGGTTGGATGAAAATGGAGCGGAATGGAATAGAGACGTAAGATGTTTGATTTTTTGGACTGTTCAGAAAAAAGATGA GTATCCCACCTTTTCTTTTCCTTCAATTTTGTGGGAATTGGATGGAAGTCATGGAACAATATTTTTTGTTTGTTTTTACA TTCCATCATTGAAATGTTCAAATGATGAATGGTAACTTCACTCCATTCTGTTTTACTTCACTTCTTTCCATATCCGCTCT GTTAGATATTCAAACTTTTGTTCCTTTAAGTCGCTCTCACTAGTATGGATTACTTAATCTGAAAGTATTCTTCTCTTCAC ACTTCCAATATGCTTAAAAAAGGGACAATCTCTGTGTTTCTCGATCTAGCTTTGATGATGCTATTAAATGTCTATGATGA GATACTTGGTGGTGTAGTATTTTCTTGGATGGTAATGTACAAGATAGTAATATCTCATTCACATTTTATTCTCTGGAGAC TAAAAGAGATACACTTTCTTATATCATTATTTTAGTAGTAGAAAGCTTGGAGCAGGTCTTTACCATGTAAGTGTAGTAGC AGTAGAAGGAACTAGGATTTCATGAATCATGTTAACAGATATCATCAAGGGAATATTTATTATCTACTGATCCATTAATT TATTTGGAGAAGTTCATTTATGTTTGATTAATAATTTGGTAGATGACTGGTGTTTCACTGTTTTTCTGCAATTAAGTCTT GTCTCTATTACTCTGCATACTACTTATGAACAGTTAGTACTGTGAAAACCAGAAAATATATAATATAATGTACAATGGTT CCAGTTAGCATCATCTTATTCTTTGACTTTATAGGGACAAGCATTTGCTTGAATAGAACCCTGATTTGGCCTGAAGGTAG TTAGAGCAATCAATTCAATTTTTCTAATACAGCAACCATAGTTTAGGCATGTGAGACCAATGCATGGAAATATGGTTGAT GGTATTGTGTGAGAGGCTGCAAAAGTCTTCATGTAGTGCACTTTGATGGCAATTGTGTCACACAAACAAACCGATATTGT GATAAGTATTTGTTATTGAAAAAGAAATTCTATTAAAAATTAAGAGAATGCCAGGACACAAAGAAATTTTGATGAAAGAT TAAAGTATATACATTTAATTTGTGCAGCTGTATTGTTTTGAAGATCGGGGTAACCGTCGTGTTGCGTTGAGGCCTGAACT TACTCCTTCTTTGGCAAGACTGGTGATACAGAAAGGGTAAAATTCATTTTGATGTGCTCATTTTAGGATTCCTTACATAT GCGGTTTTGGTGTTAAGTCTAGGACTAAAAATTACAGTTAACTATTGACATTTTTGAATGTGAATATTGAGTTCTGATCT TCATGTTTTTTGCACTTTCTAGGAAGTCTGTATCACTACCATTGAAGTGGTTCACTGTGGGACAATGTTGGCGGTATGAG AGAATGACAAGGGGGCGTCGCCGTGAGCACTACCAATGGAACATGGATATCATTGGTGTTCCTGGTGTTATGGTAAGAGC TGTCTACTATTCATCTTGATGTAATGGACAGTCCTCTTTCTAGTCAAATGTTTCAAGATTGTCATGAACCAATTATCCCA AAAACTTAAGTTTTTGGATAAGGGTCACAAGAATGATTTTATATTATTATTTCTAACACTCCCTCTCATGTAAGGGCCCT TTGGGCTTGAAGCATGGACAATGCACAGACTCACGTACCATGGGCTGAAATTCAACTTTTTATTAGAAGAATTGAGGGCG ACAAGGACCGAACTCCAGACCGCTTGGTCATAGAGGCTCTGGTACCAAGTGCGCGTGAATCATTGGATTAATTTATTGAG GTATGGGTCTGCGTCTCTGCGAATCTGAAGCCTTAGAGCTGGAATTCGATGTCGCAGTTTGTTGATGAGAAGCCTGAGCA ACATTTACTTGAATTGATTCAGAGAGTGATTTCTTCTGTAGCTTCTCCAAACGAGTCTCATGCTTAATGAGCATAGCACC AACATCAGAAATCGAACATGGAGGCTCAGTAGTCTGGACTACGGTGACAATCAAGTGATACTCTTCAGGCAAACCTTCAA GAGTCGCTTCCAGATGATCGCGATGCGAGACATGCTCACCCATGGTGAAGAGCGTGTTGACAATCATCTTGATTCGATTC AGGTAATCAGTCATGGAGTGATTTTCCTTTGCAATATGGCACAATTCAGCGCTCAGAATATTCAATTGAGCCTTGGACTG TCCATGGAAGTAGCTATGCAATTCCTCCCAAACCTGCCATGAATGAACACAAGTGACAACGTAAGGAAGAACAGATTCAG AAAGCAACGAATCTTGTTGCTCCCATTCGCTATGCAGAGGATTGATATACTCAATCATGCGATCCACATCAGATAGTAAT TTTGGTGGAATCACCGGATTCCAGTGGTGTTCATTGCGCGTAGCGGGCCATGGTGGAAAACCAAAATCCCGCCATACATG ACAAATAATGGCAGAGTATGGCAGAATATGACGGGATGTCGGCCATGGCAGAAAGCAAAAAACCACCATGAGAAACTGTC ACGGCGGATATTTGATAACACTGCCGGATTCACAACATACTTTTGAAGCTTCCTACTGCAAAGAACTCCTTCAATTTTCT GATTCTTCTCATTCATTTTGATTGAAATCTGATGAGAGAACGAGAAGGATGAAGACGAATCAGAGACATTGTCGCCTCCT GACGCACCAAATGGATTTGACAGTGAATCCATTGATGGATCGGTCAAGCTCTAGATACCATAAAGAGAAACCCTAAATAG ATAGGTAGGTAGGGAGGGTAGGAGATATGAAAATCTGAAATTCTGTTATTATGATAGGCAGAGGTTACATGAGTTACACA TTCTGTATATATGCAGAACAGAAGCAGTAGCTTCTGAATTACTGACTACTAACTACAATCTAGCATTAGTCACTTAACTA CTAACTACTAGATACAATAGGGAGGGGGTGAGGGAGATCTGAAAATCTGAAATTCTGTTATTATGATAGGCAAAGGTTAC CTGAGTTACACATTCTGTATATATACAGAACAGAAGCAGTAGGTTCTGAATTACCCACTACTAACTACTCTAAACAAGGG ATTTTAATCTCAAAGGAAGTATGTCTTGGACCTCCTTAAGGAGACATGCAAACTTGGATGCAAGGCTAGCAGATAAATTT GAAATGAAGGATCTTGGGAAACTGAAGTACTTTCTTCGAATTGATGTAGCCTACTCTAAACAGGGGATTTTAATCTCAAA GGAAGTATGTCTTGGACCTCCTTAAGGAGACATACAAACTTGGATGCAAGGCTACATGTGTTCCTATTGAGAAGAATCAT AGAATAGAAGAGGAAAGTCCCAAGATTGACAATGCTTAATATCTGAGACCAGTAGGAAAGCTAATATATTTGGCCCATAC TAGACTTGATTTAGTACATGCTGTCAATCTTCTAAGTTCTAAGTCCGTTTATGTATGATTCAAGAGCAAGACACATCCAA GCTGTAGTCTGAATTCTACATCATCTCAAAGCCACACTAAGGAGTGGATTGTTGTTTAGAAGTGGAAATTTGACCATGGA GCTGTATATAGATGCAGATGGTTAGTCATTGACAGAAGGTCAATGTTCGGCTACTATATGTTTTTGGGTGGCAATCTAGT CACATGGAGAATTAAGAACATAATATAATTCCTTGGTGTGCAGATGCTGAATTTCAAGCTATGGCACAACAAGTTTGTGA GCTATTATGTACGGGGATTGTTTTAGATGATTTGAGAGGTTAAGTATGAACATGTTGCTTCTCTGTAGTTGTGTCACAAA ATAATGAAAATTTCTGGATGTTCTTCAGAATAAAGTCTTTAGATATGTTGGTTTTTGTTATTTATATTATTACTTTGACA TGCTTTGAGTAAATTTTTATGGTTGGTTCGTATTGTGTCTCTTACTTCAAAATTTTGAACAACGGTACAAATAACATTAT TGAATGCATTAGATTGTTATCTTTTATATGGATTTTATCATCATGCTTTTTATATTGTAGGCTGAAGCAGAGCTTATATC TTCTATTGTCACTTTGTTCAAGCGAATAGGAATTACGGAATCAGATGTTGGATTTAAGGTTTCTAGTCGAAAGGTGCAGA TTTTATTTTCTTTAAATGATGGGCCGACTTTCCTTCCATTACGCTATTTTTATTTCATTTCCCTTTCTTTTCAAGAGTTA TATATTCAAGGGATGTATTAGTTAATTTATTAATATTACTTAAGACACTTAACATGTCTGCTCCTGAAAATTGTGTATTT TATTTCATTTCCCTTTCTTTTCAAGAGTTATATATTCAAGGGATGTATTAGTTAATTTATTAATATTGCTTAAGACACTT AACATGTCTGCTCCTGAAAATTGTTAGTTTGTGGGGGCATGTTAGAATATAATTTTGTTAACCATCTTTAGCTTTCTGTT ACGATTAGCTGGATTCGTTAAGAGTTAGTTAGTTTGTTTTGTAAGTGTCTCTCTCTATTACAATTACCTGAGTTAGTTTC ATTTTTATACAAACATCTCAGTGTAATCATCAATTGAATTAACAAATTCATTCTCAGAATTATACAGAACTCTCTCAATT TCTCTCTAGTCTCTTTTTTCATTCTTGTTTGTTTTCTGTTAAACTTGTTTGCAAATTCCCCAACACCATGGTATAGCTAT GGGAAAACATCAACACATTATTGAGACAACTGGTACTACTCATTTTCGACTTGCTAATACACCTTTAAAATGCTGGTGGT TATGTAGTTATTACTCCCTCCGTTCCAGAAAGTTTGTAGTTTTGGGTATGATTTCAATATCCCAAATAGTTTGTTGTTTT AGGATGCCAATGCATTTTTCCCCATTTTTTTTCCACCTGTACCCTCATTTAATACATTTTTCTCTCACTTATCACCTTTC ATATTAACCAACCACAACTCTTGTCTATTAATTACATTCCTCTCTATCTAAGTATAATTTAATAGTTACACATCATACTA GTAAAATTAAATAAGGGCAATCTAGTCAAATTATACTATCAATAATTGATTTCTTACTCTTTGTGCCACAACCTTAAACT ACAAACTTTCTGGAACGGAGGGAGTATATTCTTATAGCTGTTTACTTAATTAATTGGATGCTGTCTTCAGTTTTTTTTTT TAAATAACAAAGGGCCTCATTTTCTTTTATTTTACACTATTTCCATACATGTTTTTGGTTCTACACTTCTACTTGCTTTG TCCGTGATGAGTTATCTGCTTATGTTATTAAATGTGTCTGTTTGGGTTATTCTTGAGTTCGAAAGGGATATCGGTGTCGT TCTTCTACCTCATGCCCATTTTACATGTCTGACAATGTTACTTTCTTCAAGGACATTCTGGTCCTGCTTCAGTTTCTTGG TATGGTTTTGTTTGGTGATAGGCTATCATTTCTTCTTACTTTACAGGTTCTTCAGGAAGTATTAAGGTGTTATTCAATAC CTGAAAATTTATTTGGCAAGGTCTGCATCATTATTGATAAGGTGAGTTATGTACCTTGTTTCTGTTTTACTTATTTTCTT AAAGTGTAGATGGTGCTCTAAGTTTCTTCATCTTTGTCTTGTGTGTTTTTTAATACACTTTTGTGTGTGAATTTTTTAGG CGTATTTTTATTGCACCTAAGCCCTCATATGGTTAGGGTATCATTTATTTTGTTTAGTTCAGTCACTGAATTGAAGGATA AGGAAAATATCTTGCTTGAGGATCTTTGGTAACTTTGTATAACATTGGTGGTTGATTTCACGATTATAAGCAAATGTGGG GTACTTTAAAAGGAATTCTGACTGTCTAGTCAATAAATAAGTAAATGAGTTGTAGTTGAATCATTGGTTCTTAGAATAAA GTCCTTTGTACCTTATGGAATGGAAGTGTTAATATCATAGTAAACTCAACGCAATTCTCATTGGTATGGGTACATGTATG TGGTGTGTTGTGCACTACTACCTCCGTTCGTATTTAACTGTCCTGAGAGAGGAGAAACACATATTAAGGAGTGCATTGTT AATTTTCAGAAAAATATTATTTGTTTTCCTATTTTACCCTTTAAAATGTGTTTTATCTTCCCTCATTTATTGCTCATACA ATGACCCTATTAGGAAAAACATAATTTAATGGTCTTGAAATGCTAAGCGGACAGATATATAGGAATTTTTTTTTTCTTCA AAGTGGACAGTTAATAAGGAACGGAGGTAGTACTGTATAAAATATATGATACGCAAGGCATATTAAGTTGGTATGCTATT TGGGGAGATTTCATTTGGGAGAAGCTTCAACGGGACCTTATATCCATTTCCTATGTTAGGACAAGTGGCCAACTTGCAGA TGTGTTCACAAAGGCTTTGAATGGGGTGCGTAATGATTTCATTTTTAACAAGCTGGGTATTATCAATATCTATGCTTCAG CTTAAAGGGAAGTGTTAAGGGTTAGGGTTCTGAGTTAGAAGTAGATTATTGAGTGTGTGGGCCAGACTCATATGTACATG TATTTGGTACTTTGTACCGCACATTGTCCCTTAACCTAGAATGTACATATATCAAGACACTGCATCTAGCAGAGTATCAA ATTAGAATTTCCCAATCTCTTTTTTTCTCTCTCATATCTCTTTTGCTCCTTCAGACAAACCTATTTGTAGGATATCAATT TCGACTACTTAGGATTTCTATTTTCGTAACTTTAATTTTATAATTTGGCATTTTCCTTGTGTTCTATTGATGAAGGAATG AGCTTTCTGTCAAAGCATATCGTTCTCAATAAAAATTCATGATTTTCAATTTTATACAGATTGAGAAAATTCCAATTGAT GAGATAAAGAAAGAGTTGAAAGCTGCTGGTCTATCACAAGAGGCTGTCCTGGAGCTATTGCAAGTCCTTTCTGTAAAGTC ATTGACCGAGTTAGAAGGTTAATCCTCTGCACTTAATTGATTCTGAATTTTTTCTATAGTATAGCAAATTTCCTGAATAT CTTATGTCCTGTTGCAAGTGTTGGAAAAACACATATAACAGCCCGTTGTAGCTTATGTGGTTCAGACATTGAGAGTGGGT TTATGAATTTAAGAATACAGGTGCAAGCTTTGGATGTTGAGATATTGATTATAGATTTATTCCGCTTTTATATTTAATGA CTTCCAGCTTTTTTTCTCTTTTTGATGAATGCTTCACTTTCCCAGAATATCCTGAATGAGGTTTTGGAAACTTGTTTAGC TTGATAGAGTATCAGAGTTTGACCCTATTTTGTATTATTGTGTTTCTGTTTGATGTCATATATGTATCTCCATAATTTTT TTTAAATATCATATCCCACTTGTCAGATAAAAGATTTGCCTTCCTTTGCCGTTATCTCGAAGCCCATCTATGGCTCCACA AAGTTCATATACTCTGTATTAGTTTGTAAAAACCTAGTCATACAACTTGCATGAAATCTATATTCAATTGTATTCAGAGA GACTCGGAAACAGTGGGGAAGCAATTGCTGATCTCAAAGAGCTATTCTCACTTGCTGAAAAGTTTGGTTACTCTAAATGG CTTCAATTTGATGCGTCAGTTGTTCGTGGCCTTGCATATTACACTGGCATTGTATTCGAGGTTAGATTGTCTTCACGGCT TATATATACTAAATAAATGTTTTACATTAGTATAGATAGTTTAGGATCTTTTTTTTCTAAATTCTTGCTTGTGGATTACC TCTGTGTTGCATAACTCGATACTTTTCTCATTACATCGTGACCTGATCCTGTGACAAGTGTTTTATAGGTTCATTCAAAC ATTGAGAAGTTTCTTGGGGCTTGTGTTTTCAAATTTACATACTCTTACAGTATGCTTTGTGACTCCAAACAGACATATGC TTATTGAGTTATATAAATAAGGGTGAAGTCCATGATGAAAACCATAATCTTTGTTTAAAGCAACTTTTCATAGGCTTAAA GACATTGGAAGAATACTTTGTATTTTTTAATAAGATACTGTGAAGTTCATACCTTTGTCTGTAGTGTGTAAGATCCTTCG TGATAACATGATTTCATGATCACCATGAAGATAGCATATAATGAATCCTTTGCCCTCACTCTGCTTTTTCTCTTAAGGAT TTTTTTTTTATATAGAACCCAAAAATGAAAGAGTACGTATTATGTATAGAACAAACTTTTATATTGGTATTGTTAATGCT TCCTGGCATACTTAAGTTTTACTCACAATAATCATGTTGCATGTACACAGTAAGAGAAACAGACAGATTTATTGATTTCA GTGGTTCCGATTGTTGTGTTATTTTGTCACTGTGGTATCAATTCGCTGTTATATTTTTTCCTCTTTCAAATGATTCAATT CTTCAGTAGGGTTTTGACCGACAAGGAAAGCTCCGAGCTATCTGTGGTGGGGGGCGATATGATCATCTGTTCTCAACTTT TGGGGCTGATGACGTTGCTGCTTGTGGTTTTGGATTTGGTGATGCAGTCGTAGTGGAAGTAAGTGTTTAACTTTTCCGTT TTTCTCTATTTGAATGGATCTCAAATCCTCAAGAGTGCCTACAGGGAGTGTGAAGGGGTTTTCAATTTAAGATTGTTCTA TGTATTTTGGCAGTTTTCTGGTTTATTCGGTGGCTATTGGGTTTAATACAGGGAGCCAGGCAATCAAGTCACATCTTTTT TGGGTATTAGTATCTTATTTACTTGTCTGTAGTAGCTTTTGGGGTGCTAGTTTTCTTTGCTTCTGTGCTGCTAGCTTTAA GCTGGGTCCTTAGTTTTTCACTTGTTGTTTCTATTCTGTTTTAGAGGTTAGTCTTTTCCTCTTTTATTAGTTGCTTTCTC CCCCTCCTTGTATTTTGGGTTGGGCACCCCTTGGGCTCCCTTAATATATTTCTTTGGCTTATCAAAAAAAAAAAGTGTTT TTAACTTTTCCGTAGCAAGAGATGTGAAGCCATCATATTATGTATAATATACTATCTAGTGCTTTTTTTTATGAATTCCA TTTTCATGGGTATGTATATGATTTTGTGATGGCCCAGGGGCTGTTTGATGAAATTTCTAAAAGTAATGTTTAATCTTGGC ATACAATTATGAACAAATTTAAGCTTTTGGGAAGAATTTACTTCTCGAAAGCTTGATTTGGGCAGTCACGAACAGGAACT TGGCAGCTTAGAATGCAACACCGCGCGAGAGTTAAAAATGTTTTTCATTTGTATCAAGAAATTAACCAACTTAATTAATA CGAATTATTTGTCTTCTCAAAATAAACACCCAAATAGTAATTTTAAATTAGAAAAATTGAACTATGCACTTTAATTCGCT TGCATTTTAAATTCCCACTAATTCTCTACCCAAACACAACCTTGTGCTAGGTACACATATTTCACCTTTCTAGGGGGACA TTTTAATGAATGGAAGGTACAAAGGGGAACTTGGGTAAGCATTGGGCACATGACGGATTTGTTTTGACTTTGTCCATGTG TATTCTATTTGTTTACTGTTTTTGGATGGCTGGAATATTTCTTTTACCTTCCGCTCCCGGTATTCACCTACTTGAAAAAA GAGTGCTTCTGTTAAAGATATTTTTTTTTTGAACTGCTTCTGTTAAAGATATACTTTCACTTTTACGTAAACCTAAGTGA AAAAAATTACTGTCTAAAAGCATCTTATATTGTAGTCAACCTTTTATCAAACTCTTTTTAGAATGTTTCATCATTGTTGT GATATGCATCTATTAGAATGTTTCAGTTTACTGAGGCAACCCTCTCCCTACACGCAGTTTAATTATGTGTGCATTCAGCG CTGTAATACCTGGCTTATTACTTTCTAGTCAGAAATTTCTTTGTTAATGCTGATCTCTGCTGTTAACTGATAGCTTAATT GAAGTCGGAGTACCTCTTTTGAGACTCCCGTTTCTCCTCCTTCGTCAACTATGCTTGACCTCTGTATTCTGTAACAGTTG CTGAAAGAGAAGGGCCTGCTACCAGAACTCAGCATGCAAATAGATGACATTGTTTGTGCCTTGGATGAAGACCTTCAAGG ATATGCTGCTTTGGTTGCAAACATTCTCAGAGAAAAAGGACAGAGTGTTGACTTGGTTTTGGAAAGCAAACCACTTAAAT GGTATAAAATCCTTGTCATTTTAATTTCCTCCTAAGACATGGTCCGTGGAAGAAAATCATAACATCTTTTCATTCGTGTA GCCGTTCCCACTTCGGCAGAAGTCTTATAGTTGCTGTTGTATCATTTTTGTTTCCTTTTCCTAAATGCATACTTGAATGT TTATAATCTTCCTATTTATTCTCTTTTAGGGTTTTTAAACGAGCAGCCCGAACAAATGCTGAGCGACTGGTATTAGTGGG AAATTCTGAGTGGCAAAAGGGTGTTGTTGGTGTCAAAATTCTATCTACTGGTGAGCAGTATGAGGTTAAACTGGATGATC TAAAGTAA
CDS sequence (LotjaGi1g1v0688700.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCTGCAACTCCACTATCATCTTCCTTCCTCACCCTGCAACCGCGCTTCAACTCCTACATCAACCCTCTCTTCCGTTC ACTCACCTACCAACTCAATGGCAACTTCTCCACAGTCAGACTCCACTCCGCACTTCCCGGCGCGGCGGAGACCGACTCTC CCACCGGCGGCCGAACCGGCGCCTTAACTCCCGGCCCTTCTGTCCCCCGTGACGTGCAGAAAATCGACGTCAACCCTCCC AAGGGGACACGTGACTTCCCGCCTGAAGACATGCGCTTGCGCAACTGGCTCTTCAACCATTTCAAAGAGGTTTCACGGTT GTATGGATTTGAGGAGGTTGATTTTCCAGTGCTTGAGTCGGAGGCATTGTATACTAGGAAAGCAGGGGAGGAGATTAAGG ACCAGCTGTATTGTTTTGAAGATCGGGGTAACCGTCGTGTTGCGTTGAGGCCTGAACTTACTCCTTCTTTGGCAAGACTG GTGATACAGAAAGGGAAGTCTGTATCACTACCATTGAAGTGGTTCACTGTGGGACAATGTTGGCGGTATGAGAGAATGAC AAGGGGGCGTCGCCGTGAGCACTACCAATGGAACATGGATATCATTGGTGTTCCTGGTGTTATGGCTGAAGCAGAGCTTA TATCTTCTATTGTCACTTTGTTCAAGCGAATAGGAATTACGGAATCAGATGTTGGATTTAAGGTTTCTAGTCGAAAGGTT CTTCAGGAAGTATTAAGGTGTTATTCAATACCTGAAAATTTATTTGGCAAGGTCTGCATCATTATTGATAAGATTGAGAA AATTCCAATTGATGAGATAAAGAAAGAGTTGAAAGCTGCTGGTCTATCACAAGAGGCTGTCCTGGAGCTATTGCAAGTCC TTTCTGTAAAGTCATTGACCGAGTTAGAAGAGAGACTCGGAAACAGTGGGGAAGCAATTGCTGATCTCAAAGAGCTATTC TCACTTGCTGAAAAGTTTGGTTACTCTAAATGGCTTCAATTTGATGCGTCAGTTGTTCGTGGCCTTGCATATTACACTGG CATTGTATTCGAGTTGCTGAAAGAGAAGGGCCTGCTACCAGAACTCAGCATGCAAATAGATGACATTGTTTGTGCCTTGG ATGAAGACCTTCAAGGATATGCTGCTTTGGTTGCAAACATTCTCAGAGAAAAAGGACAGAGTGTTGACTTGGTTTTGGAA AGCAAACCACTTAAATGGGTTTTTAAACGAGCAGCCCGAACAAATGCTGAGCGACTGGTATTAGTGGGAAATTCTGAGTG GCAAAAGGGTGTTGTTGGTGTCAAAATTCTATCTACTGGTGAGCAGTATGAGGTTAAACTGGATGATCTAAAGTAA
Protein sequence (LotjaGi1g1v0688700.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPATPLSSSFLTLQPRFNSYINPLFRSLTYQLNGNFSTVRLHSALPGAAETDSPTGGRTGALTPGPSVPRDVQKIDVNPP KGTRDFPPEDMRLRNWLFNHFKEVSRLYGFEEVDFPVLESEALYTRKAGEEIKDQLYCFEDRGNRRVALRPELTPSLARL VIQKGKSVSLPLKWFTVGQCWRYERMTRGRRREHYQWNMDIIGVPGVMAEAELISSIVTLFKRIGITESDVGFKVSSRKV LQEVLRCYSIPENLFGKVCIIIDKIEKIPIDEIKKELKAAGLSQEAVLELLQVLSVKSLTELEERLGNSGEAIADLKELF SLAEKFGYSKWLQFDASVVRGLAYYTGIVFELLKEKGLLPELSMQIDDIVCALDEDLQGYAALVANILREKGQSVDLVLE SKPLKWVFKRAARTNAERLVLVGNSEWQKGVVGVKILSTGEQYEVKLDDLK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 47 | 86 | 40 | - | – | |
| PANTHER | 72 | 353 | 282 | 5.7E-167 | – | |
| PANTHER | 72 | 353 | 282 | 5.7E-167 | ||
| Gene3D | 73 | 367 | 295 | 4.6E-95 | – | |
| PIRSF | 73 | 363 | 291 | 2.7E-102 | ||
| SUPERFAMILY | 79 | 356 | 278 | 5.18E-61 | – | |
| ProSiteProfiles | 82 | 335 | 254 | 12.516 | ||
| Pfam | 82 | 354 | 273 | 4.0E-36 | ||
| CDD | 90 | 357 | 268 | 8.56667E-75 | ||
| CDD | 271 | 329 | 59 | 0.0073246 | ||
| Coils | 299 | 319 | 21 | - | – | |
| PANTHER | 351 | 450 | 100 | 5.7E-167 | ||
| PIRSF | 351 | 451 | 101 | 1.9E-15 | ||
| PANTHER | 351 | 450 | 100 | 5.7E-167 | – | |
| SUPERFAMILY | 366 | 450 | 85 | 9.82E-17 | – | |
| Gene3D | 368 | 451 | 84 | 1.9E-16 | ||
| Pfam | 370 | 450 | 81 | 9.6E-10 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Cytoplasm | All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. |
Expression pattern of LotjaGi1g1v0688700.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…