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GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Cytoplasm | All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. |
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | PREDICTED: histidyl-tRNA synthetase-like [Glycine max] gi|356505252|ref|XP_003521406.1| | 20 | ||
| – | PREDICTED: histidine--tRNA ligase-like [Cicer arietinum] gi|502122299|ref|XP_004497677.1| | 23 | ||
| – | PREDICTED: histidyl-tRNA synthetase-like [Glycine max] gi|356505252|ref|XP_003521406.1| | 11 | ||
| – | PREDICTED: histidine--tRNA ligase-like isoform X2 [Cicer arietinum] gi|502111238|ref|XP_004493995.1| | 11 | ||
| – | Protein kinase family protein; TAIR: AT3G59410.4 protein kinase family protein; Swiss-Prot: sp|Q9LX30|GCN2_ARATH eIF-2-alpha kinase GCN2; TrEMBL-Plants: tr|A0A151RUS1|A0A151RUS1_CAJCA Putative serine/threonine-protein kinase GCN2; Found in the gene: LotjaGi3g1v0498400 | 32 | ||
| – | Histidine--tRNA ligase; TAIR: AT3G02760.1 Class II aaRS and biotin synthetases superfamily protein; Swiss-Prot: sp|F4IYF8|SYHC_ARATH Histidine--tRNA ligase, cytoplasmic; TrEMBL-Plants: tr|A0A072VJI1|A0A072VJI1_MEDTR Histidyl-tRNA synthetase; Found in the gene: LotjaGi4g1v0456100 | 24 | ||
| – | Histidine--tRNA ligase; TAIR: AT3G02760.1 Class II aaRS and biotin synthetases superfamily protein; Swiss-Prot: sp|F4IYF8|SYHC_ARATH Histidine--tRNA ligase, cytoplasmic; TrEMBL-Plants: tr|A0A072VJI1|A0A072VJI1_MEDTR Histidyl-tRNA synthetase; Found in the gene: LotjaGi4g1v0456100 | 12 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| cd00773 | CDD | 1 | 14.29 |