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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR004582
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 11 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.400s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0167759.1
n.a. Cell cycle checkpoint protein RAD17 [Medicago truncatula] gi|357517967|ref|XP_003629272.1| chr0 79859700 79864958 +
2 domain predictions
2 GO terms
Lj0g3v0167759.2
n.a. PREDICTED: cell cycle checkpoint protein RAD17-like [Cicer arietinum] gi|502153551|ref|XP_004509381.1| chr0 79859700 79864958 +
2 domain predictions
2 GO terms
Lj0g3v0167759.3
n.a. PREDICTED: cell cycle checkpoint protein RAD17-like [Cicer arietinum] gi|502153551|ref|XP_004509381.1| chr0 79859700 79864958 +
2 domain predictions
2 GO terms
Lj0g3v0352249.1
n.a. Replication factor C large subunit [Medicago truncatula] gi|357438631|ref|XP_003589591.1| chr0 185251483 185259264 +
2 domain predictions
2 GO terms
Lj1g3v0812930.1
n.a. Replication factor C large subunit [Medicago truncatula] gi|357438631|ref|XP_003589591.1| chr1 10668442 10678590 +
2 domain predictions
2 GO terms
Lj1g3v0812930.2
n.a. ATPase family AAA domain-containing protein [Medicago truncatula] gi|357461523|ref|XP_003601043.1| chr1 10674737 10678590 +
2 domain predictions
2 GO terms
Lj1g3v4315300.1
n.a. Replication factor C large subunit [Medicago truncatula] gi|357438631|ref|XP_003589591.1| chr1 50647592 50649629 +
2 domain predictions
2 GO terms
Lj1g3v4315300.2
n.a. Replication factor C large subunit [Medicago truncatula] gi|357438631|ref|XP_003589591.1| chr1 50647592 50649246 +
2 domain predictions
2 GO terms
LotjaGi1g1v0160400.1
n.a. Replication factor C subunit 5; TAIR: AT1G77620.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|Q96QE3|ATAD5_HUMAN ATPase family AAA domain-containing protein 5; TrEMBL-Plants: tr|K7M6V1|K7M6V1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0160400 LjG1.1_chr1 29632700 29648325 -
2 domain predictions
2 GO terms
LotjaGi1g1v0259500.1
n.a. Replication factor C large subunit; TAIR: AT1G77620.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|Q4QY64|ATAD5_MOUSE ATPase family AAA domain-containing protein 5; TrEMBL-Plants: tr|G7J301|G7J301_MEDTR p-loop nucleoside triphosphate hydrolase superfamily protein, putative; Found in the gene: LotjaGi1g1v0259500 LjG1.1_chr1 62870342 62880632 +
2 domain predictions
2 GO terms
LotjaGi4g1v0130200.1
n.a. Cell cycle checkpoint protein RAD17, putative; TAIR: AT5G66130.1 RADIATION SENSITIVE 17; Swiss-Prot: sp|Q9MBA3|RAD17_ARATH Cell cycle checkpoint protein RAD17; TrEMBL-Plants: tr|G7LB75|G7LB75_MEDTR Cell cycle checkpoint protein RAD17, putative; Found in the gene: LotjaGi4g1v0130200 LjG1.1_chr4 19061489 19067268 -
2 domain predictions
2 GO terms