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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0259500 |
| Transcript ID | LotjaGi1g1v0259500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Replication factor C large subunit; TAIR: AT1G77620.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|Q4QY64|ATAD5_MOUSE ATPase family AAA domain-containing protein 5; TrEMBL-Plants: tr|G7J301|G7J301_MEDTR p-loop nucleoside triphosphate hydrolase superfamily protein, putative; Found in the gene: LotjaGi1g1v0259500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:62870342..62880632) extracted from Lotus japonicus Gifu genome v1.2.
TTTTTAGGAAAAGAAAGAAAAGGAAACTACATGGCGGGAACAAGGGCGCATTCCCTCCAAAATTTTCTCACACTAACTTC AAGTCCGAATCGCTCTCTCCTCTCCTCTCCTCTCCCTCCACCACTACCCCCAAATTCCAAAACCCTAATTGATCAATCCA AATCAACCAAATTCAATTCTACAGTAATGGCTGGCCCCGTCGTAGAGCTTACTCCTTCCGGCAATGCCGGCACACCGGCG CGCCGCAGTGTCCGCCGGCGGTTGGTCCAAACCACGCTCTTCCCTCTCAACCCACCACCAGAACCCCGTGACAAACCCAT CGAAGATGAAGACAGAGAGGATGAACAAGACGATGAGTACTGCGGCGACGCCGAGAATCATCGCAAGAAGAGGAAGCCCA AGGGAAAATCCACTCCTCGTAAAAAAGGTTCCAAGGTACGTGATCTTACCCGCCATTGATATTGTGACAAAATTCAAGTC TTGTTTGCTGCATTGGCATTGCAAATCGTTTGATTTTATGATTTTCCTCTGCGAACAGAATTCCACGCCGAAGAAAAATG CATCTGCTAACGAGAACAAGGTTTCAGCTTCACAGAATGTGTTTGCTGATCCAGTGCCTGATTTACGGTTAGAGGCAAAA TTGTCAGCTGAGGTTAGTTAGTGTGCTCGGTTTCGCATTTTCGGAGATTGCTTTATTCCATGCTATCTTTAGGCCTTATG TTTTTTAGGGGTTTTATGTTTTGAAATTGTGTGAAATAGCAACATGTTAGTTAAAGGCAGCCTGTGCAGTCTGTAAAGGC AACCTGGTTAAGACATTGGCCCGAAACTTTCATTATGAGTGTAGCTTCTATTTCATACTTTATGCGATAGCCGATTAGGT AATTGTGACTTGACAATCTTTGATGCTTACTTTTTGTTATTGTTTTATTTCAAATCAGGAAAATTCAAGGATGTTTGCAG GACGGCAAGTGCATCCATTTTTTTCGTCGTGTAAAGCGGGGAAGAAAATCCAGGAGATACCTGAACCAGGAAGTAACCTG TGCAAAGCTAAGAGTGAGGATGAAAGGATTACCTGTGGTCCTATTCACGTATTTGAAAATATTAAGGTACAGTACTTATG CCTATGGTTACCTGTTGCTTTGCATTGATGTAATGAAAGGCAGGTAATAAACATTTACTTGAACTCTGGGTTTTGAATTC TGTAATATCACATTTTTTGATGTAGGTGTAATATTTGTTCATGTAGGATGATACTTCATCCCTTGATTGGAGAAACTGGA CATTTTTGGGAAATACCACCTCCGAGAATTGTGGTCCAGAAAGTTCAAATTCATCTGTTTTGGAGGGTTCTGCTGAATCC TTAAATTTTAAAATGCTTCTTAGTACTTTGGATCCATCAGGCGCTTCAGTTTTTCAGAATGCTTTATCTTCCACAGATTT ACTTTCTGTGCATCAAGAAAATCTGCAAGAAACATCACCGTCAAACGCATCTCCATTAGCAGAGAAAACAAAATGTCCTC AGATGCCAAAAGATGACAAAGTGGTATGGTACTTTTTGTATATTCCTTGGTAACCCGCTCCCTATGCATAACTGTGGCAT GCAGGCAATCCATGGAAGCTAGTTTAGAGGGGTGAAATATACTAATACGAGTACCTTTGTCTCAACTAGTTGTTAACTGC TGGCTGAAAATTGTTTTCAGGACTTGGAGGTGGACGAATGTGTGAATTTTGTGCAAGCTGGCATTTTTAGAAAGTCAGAT TCTGAGCCACTGAGTAGATTTCTTCAAGAAAGGTTAGCACACAAGTCTCAGGCCACACTAATATATTCATGGCAATAACT TTTGAACATTTGGCCCTAGCCAGTTATGCTTGTATTTGTAATCTCTTTTTATTTCATGCATTTGCTAATGCTTATAGGCA ATACCTTTTGTTGAAATTTTTATATTCAGCAATATATAATAAGCTGGGTTTTTGTGTGTGTCAAAGATGAGGGTTTTTGA TTTGTAAATACTCCTGTGAGGAGATGATTTTTTTTCCATTAAAGTCCCCAACCATGTGCATGGTTGGTTATCTATTTATT AAATTCATTTAATTATTTTCCATGTTATTTCTTTTGTCTGCCAAAGCTCGAAAGAGCTTATGATTACCTCACTAGTTGTC AGAAGCTATAAGAAGCATCGGAAAAACACCTTTTCCATATAAATCCCAAATTGCTACTGGATCTCTTGACTCTTGTACTG TCATAATATTTTTAGTAGGAAATCTCCCAACTATATTTTTTTTCCCTTGTGCCAAAATAGTAAATCAACTAACGCTACTT AGTAAAGATGTGATTTTGAAATACTAGAATGTGTTTGATAGGAACTGAAATTTCTATTGAAAGATAGTGGAAACTCAGAA CAGAGCTCTGATTAGCGATTACTATGAAAATTTGCAGAAAATTATAAAAACTGAATAAGACACATACAAGAGAAAGAAGC TTCCCTTTCCTGTGGTGCCGCCACCCCAGAACTACCCAAATGATTGATTACCTTTCTCACTACCCTCCCTTCCCCCTCAT GTTCATGTTCTTCTCACTGATTCCAGCACCCTCTGCTCCCCTATCCTGCTACGACGGGTTCAGTCTCTTAGAGTTTGGTA TTACAGACTGTTCCTCCTATATTTCCCACATCATTTCCCAACCTACCCTTGTTCTGTTGTTCATTTTCCTCCTTTTTTGT TAGACCTTCATTGGAGGCCCATCAGTGTTGCAATTGTTTCCTTATGTTTATTCATCTTTTCCCTGACTCTAACCAGTATT TTTTTTTTTGATGTAAATTAAGAGTCCCTTATGCCTAGGAAAGGTATATGCCCTAATGGATTTGTTCTTTGTGATTCTCT TGGCTTAAAGCAAGATGGTTCTGAGTTAATTTTTGGTTCCTATGCCTTGATAATCAGCGTTTCAAAATGATAGCAATTTA TTTCTGCTACCGTCATTTCTCCCCTCTATTATAGCCTAATGAAGTATGCTCTGGTGTACTTGACCCCTGAGTAGTGGTAG AATGTAGATTATTAATTGTTGCTTATTTTTATAATTGTGTGACTTCATTTTTCATTTCAATAAGCTTTATGCCTGGCTAG GAAATTTATTTCCTGATACCGAGGATTTTACTTGTATTATGTGTTGCAGTATGAGGTCGTACTACCGTACTTATGAAAAC AAGGCTGAAGGCAGCTTGTGGACATACAAATACAGGCCAACGAAGGCTGTTGAGGTCAGTTTTTTTTTTTTTTAAATAAT CAAGGTTGCATTTTTTTTTAAATTTTCTTTCGTCCTAAATTCTGCTTTCTTGTTTCATGATTTGTTTGCAGGTGTGTGGT AATGATGAATCTGTGAATTTCTTGCGTGATTGGCTACATCTTTGGCGTGAAAGACGTTATGCAGGCAGAAAGGCTACATC TAGTAAGGATAAAAATGACATGCAAGATGATGATGATGGTGATTATGACTGTTCTCATAGTGACTACGATTCAGAAGATA TGAATGAGGAGGATTCCCTGCAAAATGTTCTTCTAATTACAGGACCTGTCGGGGTGTGTGGAAATCTACTTTGGCAAAAC TGTCACATGCACATCTTTACATGAATTGCCTTCTATGCTCATCATTTATGCATCTATTGTTCAGTAATATAATGGTCATT TTGTGCAAAAGAACTAGAACCTTTAAGATAGAGATTTCTGTCAAATAACAAAAGCTAAGGGTCAATTGATAAATGTACCA TGGGGAAGTAGAGTGTAGAAGATCGAACAAAAAGAGTGAAAAAGTTAATAAAACACGGGCACATAAATATTGAGTTGATT GATTCCTATAATATTTAATGTTTGCTAGTGATTTGTGATTTGGAGGATGAAAAAAAAGAAATTTGATTCTGAATAAAGTA TAGACTGGCCATTGTTGAAACCCTTTGAAACACCATTAAAATACCCTGGATCTGGTTGCTTTATATCCCTTATTATAAAG CCATTTCAGAAATGAATATATAGCCCCGCGCTCATAGGTTTCTTTGTGGATCATTGAATGCTAGAGTACATATCGAGATT TACTTTTTGTACTGTTTCTTATACTAGTGTTTGGGTTGCTTGTGAACACTTTCCCCTCCAAGGTGAATTTGGCCATAGAG CACTTTCTATTTTGTTCATTGTTTCTCACCTAATGAACCTCCGTCACGATTTTACTTTTCTATCTATTGGTTCCCTTTTT TTAACTATGTATGATCATGATATTTAAAAAATATTTGATCTGAGTTTTAATCATAGTAGTAAGGACTAAGGAATAGTTGT CTTTGTTTTCTTGGCATTTCAATTATATTGGTGAACATAAAATTTAAAATTTTACCACCTGTGCCTTCTAAATGTTTCTT CGCTTGGATAAGTGTAACTTAGCTGCGTTGCCTGAATCAATATTTTGGCTAGTATTGTTTATATTGGTGGCTAAAGCATA AGTCTATCATTTTGCAGAGTGGCAAGTCTGCAGCAGTCTATGCTTGTGCCCAAGAGCAAGGTTTTGACATATTAGAGGTA ACACCGTTTTTTGACGTATTTTGACAATTTATTCATGCTTGTAAACTGATACACTTTTTTAATTATATATTGATCCCATG CATCTTGTAAATAGCCACCTTAATTTTTGAAAACATTGCTGATGATCAAGCATAATAATTAATTAGCAAGATTTTAATCT AGTCTGATGTATCATGAAGTTTTCTATCTTCTCTGAACATTGGAATTAAGTGGTCTGTTTGCTGGCCAATGTGGACAATG ATAGTCTGAAAGATTGTTATTTATTATAGTTATTCAATATATTTTGTGGAAAAAGTTCGTATGGTCCAGTTGCTGGCTTA TATTGAGTTCTTGAGAAACAAATGGGCATAATACATTCCCCTCAAACACCTACCAGCATCTTCTTTTGTTTATAAAACAT CTAGTTGTTTGACATTTATTTTCTTTGTTTTCATGTGGTTTTTAAGTCTTTTAACCATGAATATATCTAAATATGTTAAA ATTTATGGCTCATGTCTCAACAGCTCAATGCATCAGATTGTAGAAATGGGGCTGTTGTCAAGCAGTATTTTGGAGACACT CTTAGTTCACATGGGTTTAAAAGGTTTGTAAACTCTGTTGCTTGCTGATAATTCCTGTCAGAGATAATATGTGAAAAGTG AAAACCATGAATGTGCCACCTAATATCTTAAGCTTGGAAATGAATTTTTCATTACATGGTACTAGAGATTTTATGATCTA GTGATTTAGAGTTTGATCCTTCTTGCCCCATTCTTTTAATAGAAAATTTGAATTTGTTCATATGATAAGTAGACCCGCAC GGGGTCCATATTTCAAACCCAAAAAGGTATTGCATGAGTTGTGAGAGGGTATGACTGGTATGTATAACAACTGTTCATGT ATTTTAATTTAACTGCTTGAGTGTTATGGTTAGTTATTTCACAACACTTCCAAGTTACAACCTGCTAGAGCTGAGTAATT TTAAGTTTTTAACGAACTGTAGTTTGTCTTATATCATGCACAAGCTTTCACTTTCCTGCAGCATTTTGTTGGCTTTGTTG AGTGTTCCTCTTTTCTGAGGAGAAGCATTTCATATTTCACAGGAGTCAGTAGTTTATTGAATATAAGAATGTAGATGTCA TTGTACAAGGGCTAAAGGATAAACAATACTGTATGCCAGATTGCAAAAAGCTGCTATTAGTTGTTGCACAAATCATATAG GCCCTCTATGTTGTATTTGTGTTGGAGATTTAACAGCTATGGTGTGATTATCCAATTGATGAACGAGAAAACACAATTTA AGATGTTAAGGAGGCTATTAGAAATTTAAAACAGATATGAACTAAGCATGAAGAAATGGTGTTGTAGCCCTAGATGTCTT AAATAATGAGCTTTTGATGTGGGGCTAGACTGGTTCTTCCCTTCAATTTTCACTCTGATATAGACAAGCAAAAGAGAAGG TCTAAGTGAAATAAGATATGACACTTACAATTAGGTCTAAGTAAAATAAGGATATGTCACTTATAATTAAACAGCCTGTG TGCTTTTACTCAATCTTATTTTTAGTAGAACCAAGTTACTCATTATGAGAAGCTTTTTTGACCTGTTCGATGATAATGTA AATTATTTGGTGTATATATTTCAGATTATCAGAACACACTGCAAGTTCACAGAAGAAAGCTATGAAATTGCCCCCAGCTG CGCCATTGCTTAATGTTCAAGCTACTGATGAGGTGAATGAAGGAGTGGTTGAACTGATAGCTATATCTGATGATGAAGCT CAAAGCTCTGGTGGAACATCACGAAAGTTACTTGACAAAAATAATGTTGTTGCATCTGATAAATTTCAAACTTTAATTCT AGTTGAGGATGTGGACATACTTTTTCCTGAAGATCGTGGATGCATTGCTGCCATACAACAGATTGCTGAGTCGGCAAGGG GGCCAATTATATTGACCAGCAATAGTAAGATGACTAATTAGAATAATGTATTTTTGCTCAAATATAAAATTTCAGTTCAT TTTTATGAAGACTTATTGTTGAAAAACAGGTGATAATCATGGCCTGCCAGATAATTTTGATAGGCACCATGTTTCGTTCT CATTGCCATCGCCAAAGGATTTGCTTTGCCATTTGTACACTGTATGTTCTTGAGGGTTTTCCTCCTCTCCTTCCTCAAAT GCAGTAAAGAAAAATTGTTGCCCAAATTGATATTAATATTATATGAATGACCTGCAGGTTTGTATCACAGAAGGAGTCAA CATCCATCCTCTTTTACTGCAGAAGTTTATACAGTCTTGTGATGGAGATATCCGAAAAACCATCATGCACATTCAGTTCT GGCTGCAGAGTAAAAAGAAAGGTGCATCACACAGCATACAATTATTCATTTTTGGACATGTGCTTTTAAGAAATGTTTAT TATTTGATTCGATGACATACTCATTCTAAGTTTGCTACTTTTCTGTTTAATTTGATTGCTCTGCAATTATTCACACTAAC TCGTAGCATGCACACATCAAAGAAAATATTTGGTTGTATGCATTTTTAACTATAGAATAACATTTAAAAAGTGAGAGTAG CCACGTTTGAGGATAAGATAAGTTCTTTGTTTGTATTAATATCAATATAGGCAATTGGTTAGAAGTGGAACATTGGGAAA AAAAGCAAAATTAATTGAACCGTTATTTATCTATTTATTCTCAAAACAAATAACTTCTTTTTTTGTGATATGTCTTTCCT TGAGATTGCCCTCATTAGAATTATATTTTTGGATTATCATCTGCATATATTCCTTCTTTTCTCTCTCCCTCTCTCTCTCT TTGACCTGCATTTTCTTTTGCTGTTTGTTGGTAAAGTTCATTTTTGGTTACAATATGGTTTAAGAAGATCAAAGTGTTCA GGAAAGTATTGAGTAATAAAGAATGTTATTGTGGTCATAGTATTATTATGTTACAATGTTAGATACCAGTATTATTAACT CCATTCATATATCTTTCAGTGACTGTTTGTTTTTTCCTTTCCTTTTTCTCCCCTTTTCACTCAGTTTTGACCCCATTTTG GTCTGAAGATTTGTTTCTTCCTAAATTGCTTTCAGAAGTTAAAAGCTCTTGAAAGTTTTTGTTTGTGATGACTCCATTTA GCTTATTACCATTGTGATTGTTTGCGAAACCTCAAGATTGCCCCTTTACTTTACAGATGGAAAAGTACAACCGGATTATG GCTCACTTCCATTCGATCTTGAGGTTGGCCATCAGTTATTACCAAAGATAATGCCCTGGGATTTCCCCTCAGAGATATCT GAACTAATAGAGAATGAATTTGCCAAATCGGTAAACTTAATGGAAGAAAGCTCTAGTTTGCAAGAGTTAGATGAGCAGTA TATGGAGACTGATTATATAAAGGCCAAGAAGGTGCAGATGATTGAGAGAAATGGATCTATATCAGACTACAGCGAGCTTG AAATTAAATATAATGCTATTTCTGAGTTTTCCAATTGCTCTGGATCCCCACTAGCATCCCCTCGGCAAAATGGTCGGAGG AAACTTGTAGTAATGTCCTCTGATTCTGAGGATGAGGATTCAAGTCATCGATGTTCGCTAGACACTTGTGATGATGCTAA TAAGAGACAATCCATCAAAGAAAATAATGAACCCCCCTCTGAGTTTCAATTGAATGAAAACTATCCCAGCACATCAGTGC GCAAATTGGTTTGTTCTGAATTGGAGGATCCAGAGGAAGAACATATTAAAGATTCAGAAGCAGCTGATGACACATGCTTA AATGAAACTTGTAAATCATTTGATGTGTCCTGTGTGCCAGAATCAACGTTTGTTCCTGAGACTGCCATTGAAAATGGAAC AGGGACAGTGTCCGGAGAAGTGTCTTCTGGTTGCCCTGCTGGTCCTCTGGAAGTATCGGTGAATAATGAGTTAAAACCAT TCACTTTCAGTGTTCGCAGACGCTTAACAAAATTGTCACAAAATTCAGGTCTCTTGGTGGATGCTGAAGTTCCAGATTCT TCGCCAAATGAGGGTTTGCAAGATTTTCTACATGAAAATATGGAAACTACAACTGTGAAGGTGATGGATGAGTGTAGTCG TGTGGATTTCAAACTAAAGTCAACATTTGTTGAGTCAAGTCCTTTGACGGAGACAGATATGGTTCAAGAAATGTGGAGAA AACTCCGTGAGCGTGGAGTGGAATTAAAACAGCATGTTACCTCAGATAAGCCAGGTGCTTTTCAAGTTGTTAACCTTGCT TGTGGACTGAGCAATCTAATTTCCGAAGCTGACTTGTTTCACACTCACCAGCGAAAATTGGTAAGTGCCTTTATAGCTGA AATGAAAATTGTGAAAGTTTTTCTTCCTATGTACTCCATATTGGAACTCAATCATGACAATATGTTAATGTGCAGGATAT TGTGGAATCTCCAATATTCCTTTCTGATGAAGCTGCATCTAGTTGTTATCATGAACAAACAATGACGTCCACTGTTGCTG TACATGGGTTTTGTTCTTATGCTAAACGAATAGCAGATGCAGGATCAAAGTTAAATTGTGCAAATTGGACTGATTTAGCT AATGAGATGTTGGCCTCCACAACTAATATTATGACTCTGGGGAAATTATCCAGACAGGATCTTACCAAAAGCATAGTTAT TTATGCTGGAAAGGAACTTGAGTTGAATAATCCAGTATATAATATGCAGAAAAGGTATGTAGCCACCCAATTCCACTTGT GACAGTTTTTCAAACATTTTTGGGCGTGTCTTGATGTCAAATCTTACTTTGGGTGCATGTACTACTACTACAGCAAAAAC AATGCATCTCTGCTTGATGCCATTCAATCCATTGTTCCTGCAAGAATATCCCTGGCACTGAAAGGTGAAGCATTCAGTGA ATATCTATCTTCAGTGCGCCAAATTTCTAGGTCAGAGGCCTTCCGGATTTCACAAGGTGTTGAAAAGAGAAGAGGAAGGT ACACATTTGTGAAGCAAATTCAGTTTTATCTCAGCGTACTAATTTGTATATAATAAACTAGGTATAACCTTGTATAGTTG CTCAATCACATCACACTATGCTTTAATGCAGGGTGCGGGGTGCTCAACATTACTTGAACAGGTGTGCAATGTTGTCTCCT GAAGATATATCTTTGGTGAACGAGGGTGATTTGTACAGAAAGTTTTCACAGGATACAACAAACACAGAAAGCTAATGTGT TTTGGATTTTCGTTTTAGTCAATGTAGATCCACGATTAGCGTGGCAAAATTAATACCTTGAGATATGTAAAATTACGTTT GTCTTTAAACCAACCTCAAACCAAACATACCTAGGGATACAAGCAGCTACAGGAACGGGTTTATGATTCACATAGGATTA AGTCCTAGTTTGTTTTTGCCTAGGATGATTAGGGTCATTGGGCTGAGATTGTAAATTAATCTAGAGCAGAGAATGAGTGG AGTCGCAGAAGAGGTCACCTTTGTGTCGTCTTTTTGTAAGCTCATCATACTTGATTTCATTTTTTTTTTCTTTTAATTGA TGGATGTTGAAGGATGACATGAATAAAACATAAGCATAGCACACTTGATGGATGCCAAAGACTAAATCATGTTATCCATT GATGGATACTTAAGTACGGAATGTATAGTGCAAAAATTAGTGTAATATTCCATCCGTTCCTAATTATAAGACCTAGTTTT AAATTTTTCATGTTCCTAAATATAAGACCTTTAACAATAATCTAGCAAAAA
CDS sequence (LotjaGi1g1v0259500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGGGAACAAGGGCGCATTCCCTCCAAAATTTTCTCACACTAACTTCAAGTCCGAATCGCTCTCTCCTCTCCTCTCC TCTCCCTCCACCACTACCCCCAAATTCCAAAACCCTAATTGATCAATCCAAATCAACCAAATTCAATTCTACAGTAATGG CTGGCCCCGTCGTAGAGCTTACTCCTTCCGGCAATGCCGGCACACCGGCGCGCCGCAGTGTCCGCCGGCGGTTGGTCCAA ACCACGCTCTTCCCTCTCAACCCACCACCAGAACCCCGTGACAAACCCATCGAAGATGAAGACAGAGAGGATGAACAAGA CGATGAGTACTGCGGCGACGCCGAGAATCATCGCAAGAAGAGGAAGCCCAAGGGAAAATCCACTCCTCGTAAAAAAGGTT CCAAGAATTCCACGCCGAAGAAAAATGCATCTGCTAACGAGAACAAGGTTTCAGCTTCACAGAATGTGTTTGCTGATCCA GTGCCTGATTTACGGTTAGAGGCAAAATTGTCAGCTGAGGAAAATTCAAGGATGTTTGCAGGACGGCAAGTGCATCCATT TTTTTCGTCGTGTAAAGCGGGGAAGAAAATCCAGGAGATACCTGAACCAGGAAGTAACCTGTGCAAAGCTAAGAGTGAGG ATGAAAGGATTACCTGTGGTCCTATTCACGTATTTGAAAATATTAAGGATGATACTTCATCCCTTGATTGGAGAAACTGG ACATTTTTGGGAAATACCACCTCCGAGAATTGTGGTCCAGAAAGTTCAAATTCATCTGTTTTGGAGGGTTCTGCTGAATC CTTAAATTTTAAAATGCTTCTTAGTACTTTGGATCCATCAGGCGCTTCAGTTTTTCAGAATGCTTTATCTTCCACAGATT TACTTTCTGTGCATCAAGAAAATCTGCAAGAAACATCACCGTCAAACGCATCTCCATTAGCAGAGAAAACAAAATGTCCT CAGATGCCAAAAGATGACAAAGTGGACTTGGAGGTGGACGAATGTGTGAATTTTGTGCAAGCTGGCATTTTTAGAAAGTC AGATTCTGAGCCACTGAGTAGATTTCTTCAAGAAAGTATGAGGTCGTACTACCGTACTTATGAAAACAAGGCTGAAGGCA GCTTGTGGACATACAAATACAGGCCAACGAAGGCTGTTGAGGTGTGTGGTAATGATGAATCTGTGAATTTCTTGCGTGAT TGGCTACATCTTTGGCGTGAAAGACGTTATGCAGGCAGAAAGGCTACATCTAGTAAGGATAAAAATGACATGCAAGATGA TGATGATGGTGATTATGACTGTTCTCATAGTGACTACGATTCAGAAGATATGAATGAGGAGGATTCCCTGCAAAATGTTC TTCTAATTACAGGACCTGTCGGGAGTGGCAAGTCTGCAGCAGTCTATGCTTGTGCCCAAGAGCAAGGTTTTGACATATTA GAGCTCAATGCATCAGATTGTAGAAATGGGGCTGTTGTCAAGCAGTATTTTGGAGACACTCTTAGTTCACATGGGTTTAA AAGATTATCAGAACACACTGCAAGTTCACAGAAGAAAGCTATGAAATTGCCCCCAGCTGCGCCATTGCTTAATGTTCAAG CTACTGATGAGGTGAATGAAGGAGTGGTTGAACTGATAGCTATATCTGATGATGAAGCTCAAAGCTCTGGTGGAACATCA CGAAAGTTACTTGACAAAAATAATGTTGTTGCATCTGATAAATTTCAAACTTTAATTCTAGTTGAGGATGTGGACATACT TTTTCCTGAAGATCGTGGATGCATTGCTGCCATACAACAGATTGCTGAGTCGGCAAGGGGGCCAATTATATTGACCAGCA ATAGTGATAATCATGGCCTGCCAGATAATTTTGATAGGCACCATGTTTCGTTCTCATTGCCATCGCCAAAGGATTTGCTT TGCCATTTGTACACTGTTTGTATCACAGAAGGAGTCAACATCCATCCTCTTTTACTGCAGAAGTTTATACAGTCTTGTGA TGGAGATATCCGAAAAACCATCATGCACATTCAGTTCTGGCTGCAGAGTAAAAAGAAAGATGGAAAAGTACAACCGGATT ATGGCTCACTTCCATTCGATCTTGAGGTTGGCCATCAGTTATTACCAAAGATAATGCCCTGGGATTTCCCCTCAGAGATA TCTGAACTAATAGAGAATGAATTTGCCAAATCGGTAAACTTAATGGAAGAAAGCTCTAGTTTGCAAGAGTTAGATGAGCA GTATATGGAGACTGATTATATAAAGGCCAAGAAGGTGCAGATGATTGAGAGAAATGGATCTATATCAGACTACAGCGAGC TTGAAATTAAATATAATGCTATTTCTGAGTTTTCCAATTGCTCTGGATCCCCACTAGCATCCCCTCGGCAAAATGGTCGG AGGAAACTTGTAGTAATGTCCTCTGATTCTGAGGATGAGGATTCAAGTCATCGATGTTCGCTAGACACTTGTGATGATGC TAATAAGAGACAATCCATCAAAGAAAATAATGAACCCCCCTCTGAGTTTCAATTGAATGAAAACTATCCCAGCACATCAG TGCGCAAATTGGTTTGTTCTGAATTGGAGGATCCAGAGGAAGAACATATTAAAGATTCAGAAGCAGCTGATGACACATGC TTAAATGAAACTTGTAAATCATTTGATGTGTCCTGTGTGCCAGAATCAACGTTTGTTCCTGAGACTGCCATTGAAAATGG AACAGGGACAGTGTCCGGAGAAGTGTCTTCTGGTTGCCCTGCTGGTCCTCTGGAAGTATCGGTGAATAATGAGTTAAAAC CATTCACTTTCAGTGTTCGCAGACGCTTAACAAAATTGTCACAAAATTCAGGTCTCTTGGTGGATGCTGAAGTTCCAGAT TCTTCGCCAAATGAGGGTTTGCAAGATTTTCTACATGAAAATATGGAAACTACAACTGTGAAGGTGATGGATGAGTGTAG TCGTGTGGATTTCAAACTAAAGTCAACATTTGTTGAGTCAAGTCCTTTGACGGAGACAGATATGGTTCAAGAAATGTGGA GAAAACTCCGTGAGCGTGGAGTGGAATTAAAACAGCATGTTACCTCAGATAAGCCAGGTGCTTTTCAAGTTGTTAACCTT GCTTGTGGACTGAGCAATCTAATTTCCGAAGCTGACTTGTTTCACACTCACCAGCGAAAATTGGATATTGTGGAATCTCC AATATTCCTTTCTGATGAAGCTGCATCTAGTTGTTATCATGAACAAACAATGACGTCCACTGTTGCTGTACATGGGTTTT GTTCTTATGCTAAACGAATAGCAGATGCAGGATCAAAGTTAAATTGTGCAAATTGGACTGATTTAGCTAATGAGATGTTG GCCTCCACAACTAATATTATGACTCTGGGGAAATTATCCAGACAGGATCTTACCAAAAGCATAGTTATTTATGCTGGAAA GGAACTTGAGTTGAATAATCCAGTATATAATATGCAGAAAAGCAAAAACAATGCATCTCTGCTTGATGCCATTCAATCCA TTGTTCCTGCAAGAATATCCCTGGCACTGAAAGGTGAAGCATTCAGTGAATATCTATCTTCAGTGCGCCAAATTTCTAGG TCAGAGGCCTTCCGGATTTCACAAGGTGTTGAAAAGAGAAGAGGAAGGGTGCGGGGTGCTCAACATTACTTGAACAGGTG TGCAATGTTGTCTCCTGAAGATATATCTTTGGTGAACGAGGGTGATTTGTACAGAAAGTTTTCACAGGATACAACAAACA CAGAAAGCTAA
Protein sequence (LotjaGi1g1v0259500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAGTRAHSLQNFLTLTSSPNRSLLSSPLPPPLPPNSKTLIDQSKSTKFNSTVMAGPVVELTPSGNAGTPARRSVRRRLVQ TTLFPLNPPPEPRDKPIEDEDREDEQDDEYCGDAENHRKKRKPKGKSTPRKKGSKNSTPKKNASANENKVSASQNVFADP VPDLRLEAKLSAEENSRMFAGRQVHPFFSSCKAGKKIQEIPEPGSNLCKAKSEDERITCGPIHVFENIKDDTSSLDWRNW TFLGNTTSENCGPESSNSSVLEGSAESLNFKMLLSTLDPSGASVFQNALSSTDLLSVHQENLQETSPSNASPLAEKTKCP QMPKDDKVDLEVDECVNFVQAGIFRKSDSEPLSRFLQESMRSYYRTYENKAEGSLWTYKYRPTKAVEVCGNDESVNFLRD WLHLWRERRYAGRKATSSKDKNDMQDDDDGDYDCSHSDYDSEDMNEEDSLQNVLLITGPVGSGKSAAVYACAQEQGFDIL ELNASDCRNGAVVKQYFGDTLSSHGFKRLSEHTASSQKKAMKLPPAAPLLNVQATDEVNEGVVELIAISDDEAQSSGGTS RKLLDKNNVVASDKFQTLILVEDVDILFPEDRGCIAAIQQIAESARGPIILTSNSDNHGLPDNFDRHHVSFSLPSPKDLL CHLYTVCITEGVNIHPLLLQKFIQSCDGDIRKTIMHIQFWLQSKKKDGKVQPDYGSLPFDLEVGHQLLPKIMPWDFPSEI SELIENEFAKSVNLMEESSSLQELDEQYMETDYIKAKKVQMIERNGSISDYSELEIKYNAISEFSNCSGSPLASPRQNGR RKLVVMSSDSEDEDSSHRCSLDTCDDANKRQSIKENNEPPSEFQLNENYPSTSVRKLVCSELEDPEEEHIKDSEAADDTC LNETCKSFDVSCVPESTFVPETAIENGTGTVSGEVSSGCPAGPLEVSVNNELKPFTFSVRRRLTKLSQNSGLLVDAEVPD SSPNEGLQDFLHENMETTTVKVMDECSRVDFKLKSTFVESSPLTETDMVQEMWRKLRERGVELKQHVTSDKPGAFQVVNL ACGLSNLISEADLFHTHQRKLDIVESPIFLSDEAASSCYHEQTMTSTVAVHGFCSYAKRIADAGSKLNCANWTDLANEML ASTTNIMTLGKLSRQDLTKSIVIYAGKELELNNPVYNMQKSKNNASLLDAIQSIVPARISLALKGEAFSEYLSSVRQISR SEAFRISQGVEKRRGRVRGAQHYLNRCAMLSPEDISLVNEGDLYRKFSQDTTNTES
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 23 | 23 | - | – | |
| MobiDBLite | 1 | 156 | 156 | - | – | |
| MobiDBLite | 37 | 52 | 16 | - | – | |
| PANTHER | 104 | 1250 | 1147 | 0.0 | – | |
| PANTHER | 104 | 1250 | 1147 | 0.0 | ||
| MobiDBLite | 119 | 137 | 19 | - | – | |
| MobiDBLite | 138 | 155 | 18 | - | – | |
| MobiDBLite | 303 | 322 | 20 | - | – | |
| SUPERFAMILY | 375 | 687 | 313 | 2.89E-24 | ||
| MobiDBLite | 415 | 443 | 29 | - | – | |
| MobiDBLite | 426 | 443 | 18 | - | – | |
| CDD | 454 | 512 | 59 | 3.6264E-5 | – | |
| CDD | 634 | 686 | 53 | 1.81305E-4 | – | |
| Gene3D | 634 | 696 | 63 | 2.2E-7 | – | |
| MobiDBLite | 789 | 823 | 35 | - | – | |
| MobiDBLite | 805 | 823 | 19 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | DNA repair | The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway. | ||
| Cellular component | Host cell nucleus | A membrane-bounded organelle as it is found in the host cell in which chromosomes are housed and replicated. The host is defined as the larger of the organisms involved in a symbiotic interaction. |
Expression pattern of LotjaGi1g1v0259500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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