Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0191100 |
| Transcript ID | LotjaGi1g1v0191100.2 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Heparanase; TAIR: AT5G07830.1 glucuronidase 2; Swiss-Prot: sp|Q9FF10|HPSE1_ARATH Heparanase-like protein 1; TrEMBL-Plants: tr|K7KKK3|K7KKK3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0191100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:37657194..37663102) extracted from Lotus japonicus Gifu genome v1.2.
CGCTGTAAACTTTCAATTACAATGAGCTAAGCTAGCTAGAAACCTCTTTATACGGAGCACACTCAAAGTCATAGAAAGAA GAAAACAAAAGAAAAAGAACATCACCTTTTGTTTTTATTCTAGTAGCAGTTAAAGCACCGCCACTATTGACCCACCACAC CTTCTCCTCAATAATGGCATTGAACCTCCCAAATCGAGATCTCTAGAGGTTCAGGTTCGTTACTCTTCTCTGTCCCATTT TCTTCTTCTTTATTTCTGGCTCATGGGTCTCTCTTCTAATCCTGTTTTAGCTTGTAGCTCTAGATTTCACATGAAGTAGT GGTGGTAGCTCAAAACCCACTTCGCTTTTTTCCCTGTTGTTCAATATTTATGGTCTGAGATTCATGAATTCTTATCTGTC TTATTCAGATCTTTCATTATCTATCTAACTATCTATTTCTGCTTGTGTAATAACTCTCCGTAGGCTTTTTATAATAAAAA ATGAAGGTTTTTTTGACTTATAGTTTGAATTCAACCTATTATTATTCTATGTTTTGCTTATGTTTAGTTTTAGTGTGTTG AAGAATGAAAATATAATTAAAAAAAAATTGATCATAGTTTATTTTCTGATTACGTTATTTTTGTTCTGTTTCTGATTGAC CATTGTAATGGATTTAATAAGCATATGTCATTGTGGGCATTTAAAAAATTGTGGCTTTTGATATTTACTCTGTAATGCTC AAAATTTTGAGAAGCACCTCTCATTTTCGTTTTTGACTTCTGGTAAATGAATTTATTGCCACAATTGCTACATCACAATG ATGAGTATTGATATTGAAAAGGACACACCATCTTAGGAAACCTGGGTTGCTTTTCACTGTTACCATCTACTTGTGCTAAA ATTGTAATTGGACATTATAAATTAAAGTAATGGGTATTATCTATCATTTTTACATTTCAGGAAATTTGGGCAATCATAAT CTTCATTGTCCTTTTAATAGTTTCATTTTCTGGTTTCTAGTTTCCAGTTTAAACATGGATTCATTAGATAGTGTTAGTTT AAAGCCTCAATTTCATATCTTCCTAAATTTTAGGTAAAAGAAAATTGCAATTATGTCGCTTCAGAAGATCTGTCTGTAAA TAAGCTTTTATGTTTTACTACAGTTAATTTGGATTAGTTGTGTTGGCCTCGGATGCTGCTGCAACAATTGATCCACTAAT GGGATTCCACCTCGCATTGATACTCGTTTTGGCTTCTCTTCGACTAACTTTAAGTGAAGATATCGAGCATGGTTCGCTGC TCGTAAATGGAGCTCAAGCAAAAGCTGAAACAGGGGATAACTTTATTTGTGCCACCATTGATTGGTGGCCTCACGATAAG TGTGACTACAACCATTGCCCCTGGGGATATTCATCTGTTGTAAATTTGGTGAGTATTTTGGAATTAGTTTGTATTGAAAT GAACACTCTTGAGAATTTATATTTCCCTTCCACCCCCCCCCCCCCCAAATCCTCCATTTAGAACTCTAGCAAGCAGAGTC AACCAGTTTTAGTAATTGTTCAATTCAATGTGGATTGATTTTTCAGGACTTGTCTCATCCTTTCCTTGCCAAAGCAATCC AAGGTGTGTATATTTGAATTACTTAGGTCCATATGGTTTAGAAGATCAATGACTCTGATAGCATTCTTTTTTTTTTGTGG CTGCATAAAAGTTACAATGAGCCTATTTGAATGCGGACCAAAGAGCACTTATAGGAGCTTATCTTATAAAAAAGACACAG GATAAGCTCCAATAAGTGCTCTATCAAATCATCTTTGGAATGCTTTGTTAAGCATGATAGTATTGTTTTCATGATAGCAT TCAAGCCGTTGAGGATAAGACTTGGAGGTTCTTTGCAAGACCAGGTGCTGTATGATGTAGGAAGTTTGAAGTATCCTTGT CATCTATTTCAAAAGATGAAAGGTGGACTGTTTGGATTTTCAAAGGGATGTTTACACATGGAAAGGTGGGATGAGCTGAA TCAATTTTTCAATGAAACAGGGTGAGAATTTTAACATTGAAATTCTTATTATCCCCAGCGCCTCCCTCTTCCTTCAAGCC AAATAAAAAACATGAAAAAATAAAATTTGGTTTTTAATTAGGGTACTATAACCAAGTGATAGTTTTCATTTGTTATTTTT TTTTTGTGCTTCCTCTAGTATAATCCAGCTTTACATCCCTTCATTGGAGGTATAATAGGTTCTCTAGCTGCATATACTTA ATACCTTTTTCACCCTTGATAAAAAAAACATGCAAATAGAATGATATATAGTTTTATTGTATTCCTTTTTCCTTATAATC ACAGACATAAGGTGCTTTGTTTATTGTTATCATTTAAGTTCATCATTCTAGTCCTTCTATCTTTCATGATTGGTTAATAT TAGCAATAGCTTTTGTTAGAGTGAATACCGCTGTGGTCCATCCAGGCTTTGACCTATAAATACTTGCAAACCTCTTTTTC TATAAGAAAATACAAAAAAAAAGAATTTGAATGCCTGTGTGTGCATGATTTACTATACTATCTCTATGTATGGTTTAGCA TAAGCATATTTATGTTCAAGAAATCAAAGTGGGGTGGTGGAGGGATGATTATCTGTGATGTAACTTAATTAGAATTTGAC ACTTGCAGGGCCATTGTGACATTTGGCTTGAACGCGCTCCACGGGAGGCACCAGATTAGTCATAATGTTTGGGAAGGAAC CTGGGACCCTACTAATACTTATGATTTTATAAAGTACACTATTTCAAAAGGATACAAGATTGATTCCTGGGAACTTGGTA GGACACTAGATAGAGTTATTTGTTACTTTGATGCTCATTTATGTTTAATTTGACCTTATTCTTGCATATGCTGCTTGTAG GCAATGAGTTGAGTGGTAAGGGCATTGGTGCAAGTGTTGCTGTCGCACAGTATGGTAAAGACGTGATAAAACTTAAACAA ATTCTAGATGTTTTATATGAGAGCTCCAAGTTCAAACCTTCACTTGTAGCACCTGGGGGATTTTATGAAAAGGAGTGGTA TGACAAACTTCTTCAGGTTTCGGGTTCAGGCATAATCAATGTTCTAAGTCATCATTTATATAATTTGGGCCCAGGTTTGC TTGTCATACATGATTCTTTATACTATAGTTTGGTAAATTAATCTGTTCCTAATTTAATCTCTCTTTTTCAGGTAGTGATG AGCATCTTGAAAGGAAGATTTTAGATCCTGAGCGCTTGAGCAAGGTTGAAAATATTTTCAGCAATCTTTCAGCAACCATT CAAAAACATGGTCCTTGGACTTCTGCATGGGTAGGAGAAGCTGGTGGGGCATACAACAGTGGTGGCCGCTTTGTTTCTAA CACATTTCTGAACAGCTTTTGGTAATACTGGTTGTTCATTCCCTCCATCATTTTCTGCTCATATTTTTTAATTGCTAAGA AGCATTTATGATTTTTTAATTAGCAAAATGATTACTTGTGTTTAACTTTTAAGTTGGAAAATTTAAACGACTCATATCAT AGGTACTTAGATCAACTTGGAATTGCATCCAGCTACGGGACTAAAGTTTACTGCAGACAGACTTTAATTGGAGGAAACTA TGGCCTTCTCAATACCACCACCCTCACTCCCAATCCTGACTACTACAGGCAAGTATAAATTAAAAATTGAAGAGAGAAAG AGACTAGATATATGTACTTTTTATTTTCATTATAGGGTACTTGAAGATTTATGGTGGTTCGTATATCTTTGTTGAACATA TCTGTTGCAAACCCAAGCATTAGGCCCAGGTTTGGTAAAGTCTATGAGAGGAGGCCCAAACAGCAAGATGGACCACATGA TGATTCAACATTCTAGAAGCTAATATTCCCTAGTACTATCTGGTGAGGTGGCAGCATCCTATGATGAGGAGGGGACCATT GCTACCAGCTGATAGAATATAAGTTAGTTATGGAGAGAGAGAGTCTTTTTAGGCAGAATTTGGCATAGGACTTGGGAGAG AAAGAGCACTCTCGAAATTGCTCTTGCTTATCTTGTTTTTCTTTCTGTTATTTTGTAATTCCTTAAACACTGTTTCTGGG TATTTCCAGAGGATTCAGTGATCATCAATCTCAGTTTCATTCAGTCATAGTGTTGTTATTCTGGTACCTAACATTATCTA ATCCTAGACTCTCATCTTTTTTTCCCGATAGTGCACTTTTGTGGCATCGGCTGATGGGAAAGAAGGTTCTTGCAGTTTCA AATGATATTTCTTCACCCTTTTTACGCACTTATGCCCATTGTTCAAAAGACAGCGTAAGTGCACTAATTTATTTCTACTT GTATGGAAAATATAATGTTATAGGGAGACGTGAATTTGGAGTTCACTCTTATGTATATGATGTTTGATTAGCATTCCAAT TATTAAGAAATTAAAGCTGATATGACATCATATGCAGCTTAACATGCTGATATATTATATGTAAATTTGACAGTAAGAAA AAAGAATATGCAGTGGTTAGAAACTTAGAATGCACTGAAGTTTATGGAAGAATGAATTTTAGATTTGTTCATAGGAGAGC CAAGGTGAATATAACACTGAATGATTTTATGAACATTTCACCATACTTCTGTGGTCATGCTAGAAGTTTTGGTCTCATGC CTAATCAATTAGGGTTTTCCATTTGGCTTCTAGGTGCCTGGTATTTTGGTACAATGTTGACATAGAGATTTGAGCCTACG ATCCATGCAGTTAGCCAAATCCCTCTTCTTTTTCATCAGAATAAATTTTGGTACCCACAAAAGCTTTTTTCCATAATTGA TTTTGACTTTAGAATTAATTAGGTGTTTGTTTGTTGTAGACCTGTAGTTAGATAATCAATGGGATGAAAAACGAAAATTA CTCATAAAATAGCAAAATACATATAGCACAAACAAACAGTGAACCAGATAGCTTGTGTCCAGTCTAATTTAAGCTGTTAC TATAAAAACTGAAATTGGATTCAAATCTTCACATATTACATTCTATCTAATCAGACTTCCTTGTTGTCCCAGAATATATA TCTCTTGATTTGTAGATCTTTTAGAGTTTTTGACATTATATTCCGTTTTGTTTGATAATGAATGTGTGAAAACTTCGAAC AAAGGTTGATTTTGTGTCACTCACTTCCAATTTGCTAGCAACTCTTTTAATTAAAGTGAAATTTGCAGGGAGTTGAGCTT CACATCTTGTGACTTAAGATTAGATGATAGCCATCTATCTAAACAATTGTCTGCTCTCTGAATATTTCTTTTAGCATTCA TCAGATTCTTATCAATTTCATTCTACAGGTGGGTGTAACGTTACTGTTGATCAACTTGAGCAACCAGACTAATTTCATAC TCAATGTTCAAAACCCTGTGACAGCAAGTGCTGAAGGAAATGCAGTGACCAAAAGCACCCATAAAGGAAACTCATTCTTT GACCATCTTAAGAGGACATTTTCTTGGGTTGGAACAAAAGGATCAGAAGTAACATACAGGGAAGAGTATCACCTAACTTC ACATGATGACATCATTAGAAGCCAAACCATGGTACTGAACGGTATTCCACTGGAGTTAACAAGTGAGGGAAATTTTCCAC CATTGGATCCAGTACGCAGTAATGTACTATCTCCAATATACATGGCTCCTTTGTCCATTGCATTTATTGTTTATCCTAAC TTTGATGCTCCAGCATGTGCTAGACACAGAAAACTTTAGTTTTCTATAATCTTGTAAACTAGGCACTAGGAGTATGCAAC TGCAAGCTCTCATGGTAATTGTAAGTATTCGTGAGCTGTTACTCGAAAGTTTCAAGCTTTGCAATAGTTTAATATTGAAG AGGCATAAGATGTATCATCAACTTGTGAATAAATTGTTGGTTCAAGTTATTTGTTTCACACTTGATTTT
CDS sequence (LotjaGi1g1v0191100.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGATTCCACCTCGCATTGATACTCGTTTTGGCTTCTCTTCGACTAACTTTAAGTGAAGATATCGAGCATGGTTCGCT GCTCGTAAATGGAGCTCAAGCAAAAGCTGAAACAGGGGATAACTTTATTTGTGCCACCATTGATTGGTGGCCTCACGATA AGTGTGACTACAACCATTGCCCCTGGGGATATTCATCTGTTGTAAATTTGGACTTGTCTCATCCTTTCCTTGCCAAAGCA ATCCAAGCATTCAAGCCGTTGAGGATAAGACTTGGAGGTTCTTTGCAAGACCAGGTGCTGTATGATGTAGGAAGTTTGAA GTATCCTTGTCATCTATTTCAAAAGATGAAAGGTGGACTGTTTGGATTTTCAAAGGGATGTTTACACATGGAAAGGTGGG ATGAGCTGAATCAATTTTTCAATGAAACAGGGGCCATTGTGACATTTGGCTTGAACGCGCTCCACGGGAGGCACCAGATT AGTCATAATGTTTGGGAAGGAACCTGGGACCCTACTAATACTTATGATTTTATAAAGTACACTATTTCAAAAGGATACAA GATTGATTCCTGGGAACTTGGCAATGAGTTGAGTGGTAAGGGCATTGGTGCAAGTGTTGCTGTCGCACAGTATGGTAAAG ACGTGATAAAACTTAAACAAATTCTAGATGTTTTATATGAGAGCTCCAAGTTCAAACCTTCACTTGTAGCACCTGGGGGA TTTTATGAAAAGGAGTGGTATGACAAACTTCTTCAGGTTTCGGGTTCAGGCATAATCAATGTTCTAAGTCATCATTTATA TAATTTGGGCCCAGGTAGTGATGAGCATCTTGAAAGGAAGATTTTAGATCCTGAGCGCTTGAGCAAGGTTGAAAATATTT TCAGCAATCTTTCAGCAACCATTCAAAAACATGGTCCTTGGACTTCTGCATGGGTAGGAGAAGCTGGTGGGGCATACAAC AGTGGTGGCCGCTTTGTTTCTAACACATTTCTGAACAGCTTTTGGTACTTAGATCAACTTGGAATTGCATCCAGCTACGG GACTAAAGTTTACTGCAGACAGACTTTAATTGGAGGAAACTATGGCCTTCTCAATACCACCACCCTCACTCCCAATCCTG ACTACTACAGTGCACTTTTGTGGCATCGGCTGATGGGAAAGAAGGTTCTTGCAGTTTCAAATGATATTTCTTCACCCTTT TTACGCACTTATGCCCATTGTTCAAAAGACAGCGTGGGTGTAACGTTACTGTTGATCAACTTGAGCAACCAGACTAATTT CATACTCAATGTTCAAAACCCTGTGACAGCAAGTGCTGAAGGAAATGCAGTGACCAAAAGCACCCATAAAGGAAACTCAT TCTTTGACCATCTTAAGAGGACATTTTCTTGGGTTGGAACAAAAGGATCAGAAGTAACATACAGGGAAGAGTATCACCTA ACTTCACATGATGACATCATTAGAAGCCAAACCATGGTACTGAACGGTATTCCACTGGAGTTAACAAGTGAGGGAAATTT TCCACCATTGGATCCAGTACGCAGTAATGTACTATCTCCAATATACATGGCTCCTTTGTCCATTGCATTTATTGTTTATC CTAACTTTGATGCTCCAGCATGTGCTAGACACAGAAAACTTTAG
Protein sequence (LotjaGi1g1v0191100.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGFHLALILVLASLRLTLSEDIEHGSLLVNGAQAKAETGDNFICATIDWWPHDKCDYNHCPWGYSSVVNLDLSHPFLAKA IQAFKPLRIRLGGSLQDQVLYDVGSLKYPCHLFQKMKGGLFGFSKGCLHMERWDELNQFFNETGAIVTFGLNALHGRHQI SHNVWEGTWDPTNTYDFIKYTISKGYKIDSWELGNELSGKGIGASVAVAQYGKDVIKLKQILDVLYESSKFKPSLVAPGG FYEKEWYDKLLQVSGSGIINVLSHHLYNLGPGSDEHLERKILDPERLSKVENIFSNLSATIQKHGPWTSAWVGEAGGAYN SGGRFVSNTFLNSFWYLDQLGIASSYGTKVYCRQTLIGGNYGLLNTTTLTPNPDYYSALLWHRLMGKKVLAVSNDISSPF LRTYAHCSKDSVGVTLLLINLSNQTNFILNVQNPVTASAEGNAVTKSTHKGNSFFDHLKRTFSWVGTKGSEVTYREEYHL TSHDDIIRSQTMVLNGIPLELTSEGNFPPLDPVRSNVLSPIYMAPLSIAFIVYPNFDAPACARHRKL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 19 | 19 | - | – | |
| SignalP_EUK | 1 | 19 | 19 | - | – | |
| Phobius | 1 | 2 | 2 | - | – | |
| PANTHER | 1 | 546 | 546 | 0.0 | – | |
| PANTHER | 1 | 546 | 546 | 0.0 | – | |
| Phobius | 3 | 14 | 12 | - | – | |
| Phobius | 15 | 19 | 5 | - | – | |
| Phobius | 20 | 547 | 528 | - | – | |
| Pfam | 26 | 341 | 316 | 2.0E-155 | ||
| SUPERFAMILY | 40 | 385 | 346 | 6.45E-51 | ||
| Gene3D | 65 | 383 | 319 | 3.0E-60 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Hydrolase activity, acting on glycosyl bonds | Catalysis of the hydrolysis of any glycosyl bond. |
Expression pattern of LotjaGi1g1v0191100.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…