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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0191100 |
| Transcript ID | LotjaGi1g1v0191100.1 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Heparanase; TAIR: AT5G07830.1 glucuronidase 2; Swiss-Prot: sp|Q9FF10|HPSE1_ARATH Heparanase-like protein 1; TrEMBL-Plants: tr|K7KW31|K7KW31_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0191100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:37656926..37663111) extracted from Lotus japonicus Gifu genome v1.2.
CACATGAGTCGCTGTAAACTTTCAATTACAATGAGCTAAGCTAGCTAGAAACCTCTTTATACGGAGCACACTCAAAGTCA TAGAAAGAAGAAAACAAAAGAAAAAGAACATCACCTTTTGTTTTTATTCTAGTAGCAGTTAAAGCACCGCCACTATTGAC CCACCACACCTTCTCCTCAATAATGGCATTGAACCTCCCAAATCGAGATCTCTAGAGGTTCAGGTTCGTTACTCTTCTCT GTCCCATTTTCTTCTTCTTTATTTCTGGCTCATGGGTCTCTCTTCTAATCCTGTTTTAGCTTGTAGCTCTAGATTTCACA TGAAGTAGTGGTGGTAGCTCAAAACCCACTTCGCTTTTTTCCCTGTTGTTCAATATTTATGGTCTGAGATTCATGAATTC TTATCTGTCTTATTCAGATCTTTCATTATCTATCTAACTATCTATTTCTGCTTGTGTAATAACTCTCCGTAGGCTTTTTA TAATAAAAAATGAAGGTTTTTTTGACTTATAGTTTGAATTCAACCTATTATTATTCTATGTTTTGCTTATGTTTAGTTTT AGTGTGTTGAAGAATGAAAATATAATTAAAAAAAAATTGATCATAGTTTATTTTCTGATTACGTTATTTTTGTTCTGTTT CTGATTGACCATTGTAATGGATTTAATAAGCATATGTCATTGTGGGCATTTAAAAAATTGTGGCTTTTGATATTTACTCT GTAATGCTCAAAATTTTGAGAAGCACCTCTCATTTTCGTTTTTGACTTCTGGTAAATGAATTTATTGCCACAATTGCTAC ATCACAATGATGAGTATTGATATTGAAAAGGACACACCATCTTAGGAAACCTGGGTTGCTTTTCACTGTTACCATCTACT TGTGCTAAAATTGTAATTGGACATTATAAATTAAAGTAATGGGTATTATCTATCATTTTTACATTTCAGGAAATTTGGGC AATCATAATCTTCATTGTCCTTTTAATAGTTTCATTTTCTGGTTTCTAGTTTCCAGTTTAAACATGGATTCATTAGATAG TGTTAGTTTAAAGCCTCAATTTCATATCTTCCTAAATTTTAGGTAAAAGAAAATTGCAATTATGTCGCTTCAGAAGATCT GTCTGTAAATAAGCTTTTATGTTTTACTACAGTTAATTTGGATTAGTTGTGTTGGCCTCGGATGCTGCTGCAACAATTGA TCCACTAATGGGATTCCACCTCGCATTGATACTCGTTTTGGCTTCTCTTCGACTAACTTTAAGTGAAGATATCGAGCATG GTTCGCTGCTCGTAAATGGAGCTCAAGCAAAAGCTGAAACAGGGGATAACTTTATTTGTGCCACCATTGATTGGTGGCCT CACGATAAGTGTGACTACAACCATTGCCCCTGGGGATATTCATCTGTTGTAAATTTGGTGAGTATTTTGGAATTAGTTTG TATTGAAATGAACACTCTTGAGAATTTATATTTCCCTTCCACCCCCCCCCCCCCCAAATCCTCCATTTAGAACTCTAGCA AGCAGAGTCAACCAGTTTTAGTAATTGTTCAATTCAATGTGGATTGATTTTTCAGGACTTGTCTCATCCTTTCCTTGCCA AAGCAATCCAAGGTGTGTATATTTGAATTACTTAGGTCCATATGGTTTAGAAGATCAATGACTCTGATAGCATTCTTTTT TTTTTGTGGCTGCATAAAAGTTACAATGAGCCTATTTGAATGCGGACCAAAGAGCACTTATAGGAGCTTATCTTATAAAA AAGACACAGGATAAGCTCCAATAAGTGCTCTATCAAATCATCTTTGGAATGCTTTGTTAAGCATGATAGTATTGTTTTCA TGATAGCATTCAAGCCGTTGAGGATAAGACTTGGAGGTTCTTTGCAAGACCAGGTGCTGTATGATGTAGGAAGTTTGAAG TATCCTTGTCATCTATTTCAAAAGATGAAAGGTGGACTGTTTGGATTTTCAAAGGGATGTTTACACATGGAAAGGTGGGA TGAGCTGAATCAATTTTTCAATGAAACAGGGTGAGAATTTTAACATTGAAATTCTTATTATCCCCAGCGCCTCCCTCTTC CTTCAAGCCAAATAAAAAACATGAAAAAATAAAATTTGGTTTTTAATTAGGGTACTATAACCAAGTGATAGTTTTCATTT GTTATTTTTTTTTTGTGCTTCCTCTAGTATAATCCAGCTTTACATCCCTTCATTGGAGGTATAATAGGTTCTCTAGCTGC ATATACTTAATACCTTTTTCACCCTTGATAAAAAAAACATGCAAATAGAATGATATATAGTTTTATTGTATTCCTTTTTC CTTATAATCACAGACATAAGGTGCTTTGTTTATTGTTATCATTTAAGTTCATCATTCTAGTCCTTCTATCTTTCATGATT GGTTAATATTAGCAATAGCTTTTGTTAGAGTGAATACCGCTGTGGTCCATCCAGGCTTTGACCTATAAATACTTGCAAAC CTCTTTTTCTATAAGAAAATACAAAAAAAAAGAATTTGAATGCCTGTGTGTGCATGATTTACTATACTATCTCTATGTAT GGTTTAGCATAAGCATATTTATGTTCAAGAAATCAAAGTGGGGTGGTGGAGGGATGATTATCTGTGATGTAACTTAATTA GAATTTGACACTTGCAGGGCCATTGTGACATTTGGCTTGAACGCGCTCCACGGGAGGCACCAGATTAGTCATAATGTTTG GGAAGGAACCTGGGACCCTACTAATACTTATGATTTTATAAAGTACACTATTTCAAAAGGATACAAGATTGATTCCTGGG AACTTGGTAGGACACTAGATAGAGTTATTTGTTACTTTGATGCTCATTTATGTTTAATTTGACCTTATTCTTGCATATGC TGCTTGTAGGCAATGAGTTGAGTGGTAAGGGCATTGGTGCAAGTGTTGCTGTCGCACAGTATGGTAAAGACGTGATAAAA CTTAAACAAATTCTAGATGTTTTATATGAGAGCTCCAAGTTCAAACCTTCACTTGTAGCACCTGGGGGATTTTATGAAAA GGAGTGGTATGACAAACTTCTTCAGGTTTCGGGTTCAGGCATAATCAATGTTCTAAGTCATCATTTATATAATTTGGGCC CAGGTTTGCTTGTCATACATGATTCTTTATACTATAGTTTGGTAAATTAATCTGTTCCTAATTTAATCTCTCTTTTTCAG GTAGTGATGAGCATCTTGAAAGGAAGATTTTAGATCCTGAGCGCTTGAGCAAGGTTGAAAATATTTTCAGCAATCTTTCA GCAACCATTCAAAAACATGGTCCTTGGACTTCTGCATGGGTAGGAGAAGCTGGTGGGGCATACAACAGTGGTGGCCGCTT TGTTTCTAACACATTTCTGAACAGCTTTTGGTAATACTGGTTGTTCATTCCCTCCATCATTTTCTGCTCATATTTTTTAA TTGCTAAGAAGCATTTATGATTTTTTAATTAGCAAAATGATTACTTGTGTTTAACTTTTAAGTTGGAAAATTTAAACGAC TCATATCATAGGTACTTAGATCAACTTGGAATTGCATCCAGCTACGGGACTAAAGTTTACTGCAGACAGACTTTAATTGG AGGAAACTATGGCCTTCTCAATACCACCACCCTCACTCCCAATCCTGACTACTACAGGCAAGTATAAATTAAAAATTGAA GAGAGAAAGAGACTAGATATATGTACTTTTTATTTTCATTATAGGGTACTTGAAGATTTATGGTGGTTCGTATATCTTTG TTGAACATATCTGTTGCAAACCCAAGCATTAGGCCCAGGTTTGGTAAAGTCTATGAGAGGAGGCCCAAACAGCAAGATGG ACCACATGATGATTCAACATTCTAGAAGCTAATATTCCCTAGTACTATCTGGTGAGGTGGCAGCATCCTATGATGAGGAG GGGACCATTGCTACCAGCTGATAGAATATAAGTTAGTTATGGAGAGAGAGAGTCTTTTTAGGCAGAATTTGGCATAGGAC TTGGGAGAGAAAGAGCACTCTCGAAATTGCTCTTGCTTATCTTGTTTTTCTTTCTGTTATTTTGTAATTCCTTAAACACT GTTTCTGGGTATTTCCAGAGGATTCAGTGATCATCAATCTCAGTTTCATTCAGTCATAGTGTTGTTATTCTGGTACCTAA CATTATCTAATCCTAGACTCTCATCTTTTTTTCCCGATAGTGCACTTTTGTGGCATCGGCTGATGGGAAAGAAGGTTCTT GCAGTTTCAAATGATATTTCTTCACCCTTTTTACGCACTTATGCCCATTGTTCAAAAGACAGCGTAAGTGCACTAATTTA TTTCTACTTGTATGGAAAATATAATGTTATAGGGAGACGTGAATTTGGAGTTCACTCTTATGTATATGATGTTTGATTAG CATTCCAATTATTAAGAAATTAAAGCTGATATGACATCATATGCAGCTTAACATGCTGATATATTATATGTAAATTTGAC AGTAAGAAAAAAGAATATGCAGTGGTTAGAAACTTAGAATGCACTGAAGTTTATGGAAGAATGAATTTTAGATTTGTTCA TAGGAGAGCCAAGGTGAATATAACACTGAATGATTTTATGAACATTTCACCATACTTCTGTGGTCATGCTAGAAGTTTTG GTCTCATGCCTAATCAATTAGGGTTTTCCATTTGGCTTCTAGGTGCCTGGTATTTTGGTACAATGTTGACATAGAGATTT GAGCCTACGATCCATGCAGTTAGCCAAATCCCTCTTCTTTTTCATCAGAATAAATTTTGGTACCCACAAAAGCTTTTTTC CATAATTGATTTTGACTTTAGAATTAATTAGGTGTTTGTTTGTTGTAGACCTGTAGTTAGATAATCAATGGGATGAAAAA CGAAAATTACTCATAAAATAGCAAAATACATATAGCACAAACAAACAGTGAACCAGATAGCTTGTGTCCAGTCTAATTTA AGCTGTTACTATAAAAACTGAAATTGGATTCAAATCTTCACATATTACATTCTATCTAATCAGACTTCCTTGTTGTCCCA GAATATATATCTCTTGATTTGTAGATCTTTTAGAGTTTTTGACATTATATTCCGTTTTGTTTGATAATGAATGTGTGAAA ACTTCGAACAAAGGTTGATTTTGTGTCACTCACTTCCAATTTGCTAGCAACTCTTTTAATTAAAGTGAAATTTGCAGGGA GTTGAGCTTCACATCTTGTGACTTAAGATTAGATGATAGCCATCTATCTAAACAATTGTCTGCTCTCTGAATATTTCTTT TAGCATTCATCAGATTCTTATCAATTTCATTCTACAGGTGGGTGTAACGTTACTGTTGATCAACTTGAGCAACCAGACTA ATTTCATACTCAATGTTCAAAACCCTGTGACAGCAAGTGCTGAAGGAAATGCAGTGACCAAAAGCACCCATAAAGGAAAC TCATTCTTTGACCATCTTAAGAGGACATTTTCTTGGGTTGGAACAAAAGGATCAGAAGTAACATACAGGGAAGAGTATCA CCTAACTTCACATGATGACATCATTAGAAGCCAAACCATGGTACTGAACGGTATTCCACTGGAGTTAACAAGTGAGGGAA ATTTTCCACCATTGGATCCAGTACGCAGTAATGTACTATCTCCAATATACATGGCTCCTTTGTCCATTGCATTTATTGTT TATCCTAACTTTGATGCTCCAGCATGTGCTAGACACAGAAAACTTTAGTTTTCTATAATCTTGTAAACTAGGCACTAGGA GTATGCAACTGCAAGCTCTCATGGTAATTGTAAGTATTCGTGAGCTGTTACTCGAAAGTTTCAAGCTTTGCAATAGTTTA ATATTGAAGAGGCATAAGATGTATCATCAACTTGTGAATAAATTGTTGGTTCAAGTTATTTGTTTCACACTTGATTTTCT TTGGGAAAGTAGTGATTTTGTTTCATTCTTCTTCAGTAGTGATTTAAGGCATTGGGTTTAGGGTCATATATTTGTCTGAC CACACCGCCCGAAGGACTTTCACTACGAGAAGTCGTCATCATAGTCACACTAACCATTGGCTCTGATACCTTTCACTGAG GAGACAGAGGGAGCCCATGGGCCAAGAAAACGAGACATCAAGAGAACTTGACGCTATAACTTTACTCAAAATCTTAAGAC ATTGGATTTATGGGACTCAATCACTT
CDS sequence (LotjaGi1g1v0191100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGATTCCACCTCGCATTGATACTCGTTTTGGCTTCTCTTCGACTAACTTTAAGTGAAGATATCGAGCATGGTTCGCT GCTCGTAAATGGAGCTCAAGCAAAAGCTGAAACAGGGGATAACTTTATTTGTGCCACCATTGATTGGTGGCCTCACGATA AGTGTGACTACAACCATTGCCCCTGGGGATATTCATCTGTTGTAAATTTGGACTTGTCTCATCCTTTCCTTGCCAAAGCA ATCCAAGCATTCAAGCCGTTGAGGATAAGACTTGGAGGTTCTTTGCAAGACCAGGTGCTGTATGATGTAGGAAGTTTGAA GTATCCTTGTCATCTATTTCAAAAGATGAAAGGTGGACTGTTTGGATTTTCAAAGGGATGTTTACACATGGAAAGGTGGG ATGAGCTGAATCAATTTTTCAATGAAACAGGGGCCATTGTGACATTTGGCTTGAACGCGCTCCACGGGAGGCACCAGATT AGTCATAATGTTTGGGAAGGAACCTGGGACCCTACTAATACTTATGATTTTATAAAGTACACTATTTCAAAAGGATACAA GATTGATTCCTGGGAACTTGGCAATGAGTTGAGTGGTAAGGGCATTGGTGCAAGTGTTGCTGTCGCACAGTATGGTAAAG ACGTGATAAAACTTAAACAAATTCTAGATGTTTTATATGAGAGCTCCAAGTTCAAACCTTCACTTGTAGCACCTGGGGGA TTTTATGAAAAGGAGTGGTATGACAAACTTCTTCAGGTTTCGGGTTCAGGCATAATCAATGTTCTAAGTCATCATTTATA TAATTTGGGCCCAGGTAGTGATGAGCATCTTGAAAGGAAGATTTTAGATCCTGAGCGCTTGAGCAAGGTTGAAAATATTT TCAGCAATCTTTCAGCAACCATTCAAAAACATGGTCCTTGGACTTCTGCATGGGTAGGAGAAGCTGGTGGGGCATACAAC AGTGGTGGCCGCTTTGTTTCTAACACATTTCTGAACAGCTTTTGGTACTTAGATCAACTTGGAATTGCATCCAGCTACGG GACTAAAGTTTACTGCAGACAGACTTTAATTGGAGGAAACTATGGCCTTCTCAATACCACCACCCTCACTCCCAATCCTG ACTACTACAGGCAAGTATAA
Protein sequence (LotjaGi1g1v0191100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGFHLALILVLASLRLTLSEDIEHGSLLVNGAQAKAETGDNFICATIDWWPHDKCDYNHCPWGYSSVVNLDLSHPFLAKA IQAFKPLRIRLGGSLQDQVLYDVGSLKYPCHLFQKMKGGLFGFSKGCLHMERWDELNQFFNETGAIVTFGLNALHGRHQI SHNVWEGTWDPTNTYDFIKYTISKGYKIDSWELGNELSGKGIGASVAVAQYGKDVIKLKQILDVLYESSKFKPSLVAPGG FYEKEWYDKLLQVSGSGIINVLSHHLYNLGPGSDEHLERKILDPERLSKVENIFSNLSATIQKHGPWTSAWVGEAGGAYN SGGRFVSNTFLNSFWYLDQLGIASSYGTKVYCRQTLIGGNYGLLNTTTLTPNPDYYRQV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 19 | 19 | - | – | |
| SignalP_EUK | 1 | 19 | 19 | - | – | |
| Phobius | 1 | 2 | 2 | - | – | |
| PANTHER | 1 | 377 | 377 | 3.2E-236 | – | |
| PANTHER | 1 | 377 | 377 | 3.2E-236 | – | |
| Phobius | 3 | 14 | 12 | - | – | |
| Phobius | 15 | 19 | 5 | - | – | |
| Phobius | 20 | 379 | 360 | - | – | |
| Pfam | 26 | 341 | 316 | 6.2E-156 | ||
| SUPERFAMILY | 40 | 376 | 337 | 1.87E-48 | ||
| Gene3D | 65 | 379 | 315 | 6.7E-58 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Hydrolase activity, acting on glycosyl bonds | Catalysis of the hydrolysis of any glycosyl bond. |
Expression pattern of LotjaGi1g1v0191100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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