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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR005746
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 35 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.897s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0095619.1
n.a. chloroplast thioredoxin M-type [Arachis hypogaea] gi|83776783|gb|ABC46707.1| chr0 40257156 40258577 -
3 domain predictions
3 GO terms
Lj0g3v0106609.1
n.a. PREDICTED: thioredoxin-like protein CITRX, chloroplastic-like [Glycine max] gi|356508306|ref|XP_003522899.1| chr0 45857291 45858203 +
2 domain predictions
3 GO terms
Lj0g3v0112529.1
n.a. PREDICTED: thioredoxin-like 1-1, chloroplastic-like [Cicer arietinum] gi|502107053|ref|XP_004493141.1| chr0 49033783 49035300 -
2 domain predictions
3 GO terms
Lj0g3v0123979.1
n.a. PREDICTED: thioredoxin-like 1-1, chloroplastic-like [Glycine max] gi|356508541|ref|XP_003523014.1| chr0 55625284 55627349 +
2 domain predictions
3 GO terms
Lj0g3v0128609.1
n.a. Thiol:disulfide interchange protein txlA-like protein [Medicago truncatula] gi|357440993|ref|XP_003590774.1| chr0 58103326 58106367 +
2 domain predictions
3 GO terms
Lj0g3v0168809.1
n.a. Thioredoxin-like protein [Medicago truncatula] gi|357452667|ref|XP_003596610.1| chr0 80618605 80620096 -
2 domain predictions
3 GO terms
Lj0g3v0282949.1
n.a. PREDICTED: thioredoxin M4, chloroplastic-like isoform X1 [Cicer arietinum] gi|502167294|ref|XP_004514101.1| chr0 146631933 146634156 +
3 domain predictions
3 GO terms
Lj0g3v0286769.1
n.a. PREDICTED: thioredoxin M4, chloroplastic-like [Glycine max] gi|356546877|ref|XP_003541848.1| chr0 149007895 149010722 -
3 domain predictions
3 GO terms
Lj1g3v1442770.1
n.a. Thioredoxin-like protein [Medicago truncatula] gi|357443639|ref|XP_003592097.1| chr1 17359949 17362192 -
4 domain predictions
3 GO terms
Lj1g3v1650140.1
n.a. PREDICTED: thioredoxin-like 4, chloroplastic-like isoform X1 [Cicer arietinum] gi|502132867|ref|XP_004501566.1| chr1 19781299 19783319 +
2 domain predictions
3 GO terms
Lj1g3v2533790.1
n.a. Thioredoxin H-type 9 [Medicago truncatula] gi|357477627|ref|XP_003609099.1| chr1 29039310 29042998 -
2 domain predictions
3 GO terms
Lj1g3v2534950.1
n.a. PREDICTED: thioredoxin H9-like isoform X1 [Cicer arietinum] gi|502155500|ref|XP_004510093.1| chr1 29093658 29097816 -
2 domain predictions
3 GO terms
Lj1g3v2838090.1
n.a. Thioredoxin [Medicago truncatula] gi|357507807|ref|XP_003624192.1| chr1 32262431 32266583 +
2 domain predictions
3 GO terms
Lj1g3v2941830.1
n.a. thioredoxin [Arabidopsis thaliana] gi|21595244|gb|AAM66084.1| chr1 33366005 33367039 -
2 domain predictions
3 GO terms
Lj1g3v4360080.1
n.a. PREDICTED: thioredoxin-like 3-1, chloroplastic-like isoform 2 [Glycine max] gi|356572122|ref|XP_003554219.1| chr1 51170004 51171708 +
2 domain predictions
3 GO terms
Lj2g3v0912040.1
n.a. PREDICTED: thioredoxin-like 2, chloroplastic-like [Glycine max] gi|356497145|ref|XP_003517423.1| chr2 13989270 13994185 -
2 domain predictions
3 GO terms
Lj2g3v0912040.2
n.a. PREDICTED: thioredoxin-like 2, chloroplastic-like [Glycine max] gi|356497145|ref|XP_003517423.1| chr2 13989270 13993138 -
2 domain predictions
3 GO terms
Lj2g3v1349230.1
n.a. PREDICTED: thioredoxin H2-like [Cicer arietinum] gi|502093505|ref|XP_004489966.1| chr2 21203137 21203912 +
3 domain predictions
3 GO terms
Lj2g3v1349340.1
n.a. PREDICTED: thioredoxin H7-like [Glycine max] gi|356498146|ref|XP_003517914.1| chr2 21225130 21226105 +
2 domain predictions
3 GO terms
Lj2g3v1349350.1
n.a. PREDICTED: thioredoxin H2-like [Glycine max] gi|356567572|ref|XP_003551992.1| chr2 21229192 21230729 +
2 domain predictions
3 GO terms
Lj2g3v1728790.1
n.a. PREDICTED: thioredoxin H-type-like [Cicer arietinum] gi|502161222|ref|XP_004512082.1| chr2 26540356 26542444 -
2 domain predictions
3 GO terms
Lj2g3v1828810.1
n.a. PREDICTED: thioredoxin-like protein HCF164, chloroplastic-like [Cicer arietinum] gi|502161022|ref|XP_004511987.1| chr2 27602539 27604319 +
2 domain predictions
3 GO terms
Lj3g3v1012190.1
n.a. n.a. chr3 13527398 13530546 +
2 domain predictions
3 GO terms
Lj3g3v1012200.1
n.a. Thioredoxin-like protein [Medicago truncatula] gi|357474835|ref|XP_003607703.1| chr3 13527999 13530429 -
2 domain predictions
3 GO terms
Lj4g3v0230910.1
n.a. PREDICTED: thioredoxin O1, mitochondrial-like [Glycine max] gi|356512209|ref|XP_003524813.1| chr4 2840660 2843743 -
2 domain predictions
3 GO terms
Lj4g3v0619960.1
n.a. PREDICTED: thioredoxin M3, chloroplastic-like [Cicer arietinum] gi|502143143|ref|XP_004505233.1| chr4 9377746 9380480 +
2 domain predictions
3 GO terms
Lj4g3v3115170.1
n.a. PREDICTED: TPR repeat-containing thioredoxin TDX-like [Glycine max] gi|356524704|ref|XP_003530968.1| chr4 42247956 42252229 -
2 domain predictions
3 GO terms
Lj5g3v0254500.1
n.a. PREDICTED: thioredoxin-like protein CDSP32, chloroplastic-like [Cicer arietinum] gi|502126453|ref|XP_004499312.1| chr5 2069406 2070748 -
2 domain predictions
3 GO terms
Lj5g3v1949680.1
n.a. Thioredoxin-like protein [Medicago truncatula] gi|357443639|ref|XP_003592097.1| chr5 27441189 27443432 +
4 domain predictions
3 GO terms
Lj5g3v2258530.1
n.a. PREDICTED: thioredoxin X, chloroplastic-like [Cicer arietinum] gi|502121231|ref|XP_004497231.1| chr5 32843096 32844898 -
2 domain predictions
3 GO terms
Lj6g3v2168630.1
n.a. PREDICTED: thioredoxin-like protein CXXS1-like isoform X1 [Cicer arietinum] gi|502077471|ref|XP_004485661.1| chr6 24987761 24989482 +
2 domain predictions
3 GO terms
LotjaGi1g1v0167700.1
n.a. Thioredoxin; TAIR: AT4G03520.1 Thioredoxin superfamily protein; Swiss-Prot: sp|P07591|TRXM_SPIOL Thioredoxin M-type, chloroplastic; TrEMBL-Plants: tr|I3SJS4|I3SJS4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0167700 LjG1.1_chr1 31815951 31827038 +
2 domain predictions
3 GO terms
LotjaGi2g1v0309700.1
n.a. Thioredoxin; TAIR: AT5G39950.1 thioredoxin 2; Swiss-Prot: sp|Q38879|TRXH2_ARATH Thioredoxin H2; TrEMBL-Plants: tr|A0A151TFZ4|A0A151TFZ4_CAJCA Thioredoxin H-type 2; Found in the gene: LotjaGi2g1v0309700 LjG1.1_chr2 78419055 78420286 +
2 domain predictions
3 GO terms
LotjaGi3g1v0048000.1
n.a. Thioredoxin; TAIR: AT3G15360.1 thioredoxin M-type 4; Swiss-Prot: sp|Q9SEU6|TRXM4_ARATH Thioredoxin M4, chloroplastic; TrEMBL-Plants: tr|A0A151S239|A0A151S239_CAJCA Uncharacterized protein; Found in the gene: LotjaGi3g1v0048000 LjG1.1_chr3 5096065 5098692 +
2 domain predictions
3 GO terms
LotjaGi3g1v0268600.1
n.a. Thioredoxin; TAIR: AT3G15360.1 thioredoxin M-type 4; Swiss-Prot: sp|Q9SEU6|TRXM4_ARATH Thioredoxin M4, chloroplastic; TrEMBL-Plants: tr|A0A1J7HXK2|A0A1J7HXK2_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0268600 LjG1.1_chr3 51596474 51599898 +
2 domain predictions
3 GO terms