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Lj1g3v2533790.1

Overview

Field Value
Gene ID Lj1g3v2533790
Transcript ID Lj1g3v2533790.1
Lotus japonicus genome version MG20 v3.0
Description Thioredoxin H-type 9 [Medicago truncatula] gi|357477627|ref|XP_003609099.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR10438:SF240
1 136 136 4.50E-88 –
PANTHER
PTHR10438
1 136 136 4.50E-88
IPR005746
ProSiteProfiles
PS51352
19 131 113 11.787
IPR013766
SUPERFAMILY
SSF52833
21 128 108 4.41E-30
IPR012336
Gene3D
G3DSA:3.40.30.10
24 126 103 9.50E-30
IPR012336
Pfam
PF00085
27 126 100 6.50E-24
IPR013766
CDD
cd02947
38 126 89 4.68E-29 –
PRINTS
PR00421
48 56 9 1.50E-05 –
ProSitePatterns
PS00194
49 67 19 –
IPR017937
PRINTS
PR00421
56 65 10 1.50E-05 –
PRINTS
PR00421
95 106 12 1.50E-05 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0006662
Biological process Glycerol ether metabolic process The chemical reactions and pathways involving glycerol ethers, any anhydride formed between two organic hydroxy compounds, one of which is glycerol.
Subterm of
GO:0015035
Molecular function Protein disulfide oxidoreductase activity Catalysis of the reaction: a protein with reduced sulfide groups = a protein with oxidized disulfide bonds.
Subterm of
GO:0045454
Biological process Cell redox homeostasis Any process that maintains the redox environment of a cell or compartment within a cell.
Subterm of

Genome browser

LORE1 insertions 10

Expression data

Expression pattern

Expression pattern of Lj1g3v2533790.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj1g3v2533790.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.