Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

Lj2g3v1828810.1

Overview

Field Value
Gene ID Lj2g3v1828810
Transcript ID Lj2g3v1828810.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: thioredoxin-like protein HCF164, chloroplastic-like [Cicer arietinum] gi|502161022|ref|XP_004511987.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR10438:SF272
39 254 216 1.10E-100 –
PANTHER
PTHR10438
39 254 216 1.10E-100
IPR005746
MobiDBLite
mobidb-lite
70 89 20 – –
ProSiteProfiles
PS51352
82 231 150 14.838
IPR013766
CDD
cd02950
121 262 142 5.16E-81 –
Gene3D
G3DSA:3.40.30.10
122 229 108 3.00E-25
IPR012336
Pfam
PF00085
132 227 96 5.20E-20
IPR013766
SUPERFAMILY
SSF52833
133 230 98 2.21E-23
IPR012336

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0006662
Biological process Glycerol ether metabolic process The chemical reactions and pathways involving glycerol ethers, any anhydride formed between two organic hydroxy compounds, one of which is glycerol.
Subterm of
GO:0015035
Molecular function Protein disulfide oxidoreductase activity Catalysis of the reaction: a protein with reduced sulfide groups = a protein with oxidized disulfide bonds.
Subterm of
GO:0045454
Biological process Cell redox homeostasis Any process that maintains the redox environment of a cell or compartment within a cell.
Subterm of

Genome browser

LORE1 insertions 8

Expression data

Expression pattern

Expression pattern of Lj2g3v1828810.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj2g3v1828810.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.