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Lj2g3v1349350.1

Overview

Field Value
Gene ID Lj2g3v1349350
Transcript ID Lj2g3v1349350.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: thioredoxin H2-like [Glycine max] gi|356567572|ref|XP_003551992.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
ProSiteProfiles
PS51352
1 126 126 13.541
IPR013766
PANTHER
PTHR10438
13 149 137 5.70E-67
IPR005746
PANTHER
PTHR10438:SF278
13 149 137 5.70E-67 –
Gene3D
G3DSA:3.40.30.10
13 124 112 4.00E-30
IPR012336
SUPERFAMILY
SSF52833
18 125 108 3.09E-30
IPR012336
CDD
cd02947
31 122 92 4.79E-34 –
Pfam
PF00085
32 123 92 8.80E-26
IPR013766
PRINTS
PR00421
43 51 9 7.40E-05 –
ProSitePatterns
PS00194
44 62 19 –
IPR017937
PRINTS
PR00421
51 60 10 7.40E-05 –
PRINTS
PR00421
90 101 12 7.40E-05 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0006662
Biological process Glycerol ether metabolic process The chemical reactions and pathways involving glycerol ethers, any anhydride formed between two organic hydroxy compounds, one of which is glycerol.
Subterm of
GO:0015035
Molecular function Protein disulfide oxidoreductase activity Catalysis of the reaction: a protein with reduced sulfide groups = a protein with oxidized disulfide bonds.
Subterm of
GO:0045454
Biological process Cell redox homeostasis Any process that maintains the redox environment of a cell or compartment within a cell.
Subterm of

Genome browser

LORE1 insertions 3

Expression data

Expression pattern

Expression pattern of Lj2g3v1349350.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj2g3v1349350.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.