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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR006822
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 7 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.388s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj6g3v1588730.1
n.a. PREDICTED: coatomer subunit epsilon-1-like [Cicer arietinum] gi|502080269|ref|XP_004486511.1| chr6 17962336 17963189 +
2 domain predictions
2 GO terms
Lj6g3v1588730.2
n.a. PREDICTED: coatomer subunit epsilon-1-like [Cicer arietinum] gi|502080269|ref|XP_004486511.1| chr6 17962336 17964396 +
3 domain predictions
2 GO terms
LotjaGi6g1v0264200.1
n.a. Coatomer epsilon subunit; TAIR: AT1G30630.1 Coatomer epsilon subunit; Swiss-Prot: sp|Q9SA78|COPE1_ARATH Coatomer subunit epsilon-1; TrEMBL-Plants: tr|A0A0S3S4G6|A0A0S3S4G6_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0264200 LjG1.1_chr6 57776074 57781140 +
2 domain predictions
2 GO terms
LotjaGi6g1v0264200.2
n.a. Coatomer epsilon subunit; TAIR: AT1G30630.1 Coatomer epsilon subunit; Swiss-Prot: sp|Q9SA78|COPE1_ARATH Coatomer subunit epsilon-1; TrEMBL-Plants: tr|Q9MAX8|Q9MAX8_SOYBN Epsilon1-COP; Found in the gene: LotjaGi6g1v0264200 LjG1.1_chr6 57776283 57780032 +
3 domain predictions
2 GO terms
LotjaGi6g1v0264200.3
n.a. Coatomer epsilon subunit; TAIR: AT1G30630.1 Coatomer epsilon subunit; Swiss-Prot: sp|Q9SA78|COPE1_ARATH Coatomer subunit epsilon-1; TrEMBL-Plants: tr|A0A0S3S4G6|A0A0S3S4G6_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0264200 LjG1.1_chr6 57776585 57777807 +
2 domain predictions
2 GO terms
LotjaGi6g1v0264200.4
n.a. Coatomer epsilon subunit; TAIR: AT1G30630.1 Coatomer epsilon subunit; Swiss-Prot: sp|Q9SA78|COPE1_ARATH Coatomer subunit epsilon-1; TrEMBL-Plants: tr|Q9MAX8|Q9MAX8_SOYBN Epsilon1-COP; Found in the gene: LotjaGi6g1v0264200 LjG1.1_chr6 57776585 57779701 +
3 domain predictions
2 GO terms
LotjaGi6g1v0264200.5
n.a. Coatomer epsilon subunit; TAIR: AT1G30630.1 Coatomer epsilon subunit; Swiss-Prot: sp|Q9SA78|COPE1_ARATH Coatomer subunit epsilon-1; TrEMBL-Plants: tr|K7MB75|K7MB75_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0264200 LjG1.1_chr6 57776585 57779701 +
3 domain predictions
2 GO terms