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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR006845
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 8 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.423s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj1g3v4998490.1
n.a. PREDICTED: peroxisome biogenesis protein 12-like [Glycine max] gi|356505983|ref|XP_003521768.1| chr1 60811777 60814718 +
2 domain predictions
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Lj5g3v0434820.1
n.a. PREDICTED: peroxisome biogenesis factor 10-like [Glycine max] gi|356564027|ref|XP_003550258.1| chr5 4364717 4372151 -
2 domain predictions
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Lj5g3v0434820.2
n.a. PREDICTED: peroxisome biogenesis factor 10-like [Cicer arietinum] gi|502125238|ref|XP_004498856.1| chr5 4366697 4372151 -
2 domain predictions
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LotjaGi1g1v0784200.1
n.a. Peroxisome biogenesis protein 12; TAIR: AT3G04460.1 peroxin-12; Swiss-Prot: sp|Q9M841|PEX12_ARATH Peroxisome biogenesis protein 12; TrEMBL-Plants: tr|A0A0L9VKU1|A0A0L9VKU1_PHAAN Peroxisome biogenesis protein 12; Found in the gene: LotjaGi1g1v0784200 LjG1.1_chr1 135701937 135706772 +
2 domain predictions
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LotjaGi3g1v0368100.1
n.a. Peroxisome biogenesis protein 2; TAIR: AT1G79810.1 Pex2/Pex12 N-terminal domain-containing protein / zinc finger (C3HC4-type RING finger) family protein; Swiss-Prot: sp|Q9CA86|PEX2_ARATH Peroxisome biogenesis protein 2; TrEMBL-Plants: tr|G7LFV7|G7LFV7_MEDTR Zinc finger, C3HC4 type (RING finger) protein; Found in the gene: LotjaGi3g1v0368100 LjG1.1_chr3 75447175 75451107 -
2 domain predictions
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LotjaGi3g1v0368100.2
n.a. Peroxisome biogenesis protein 2; TAIR: AT1G79810.1 Pex2/Pex12 N-terminal domain-containing protein / zinc finger (C3HC4-type RING finger) family protein; Swiss-Prot: sp|Q9CA86|PEX2_ARATH Peroxisome biogenesis protein 2; TrEMBL-Plants: tr|G7LFV7|G7LFV7_MEDTR Zinc finger, C3HC4 type (RING finger) protein; Found in the gene: LotjaGi3g1v0368100 LjG1.1_chr3 75447175 75451107 -
2 domain predictions
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LotjaGi3g1v0368100.3
n.a. Peroxisome biogenesis protein 2; TAIR: AT1G79810.1 Pex2/Pex12 N-terminal domain-containing protein / zinc finger (C3HC4-type RING finger) family protein; Swiss-Prot: sp|Q9CA86|PEX2_ARATH Peroxisome biogenesis protein 2; TrEMBL-Plants: tr|A0A151SHE5|A0A151SHE5_CAJCA Peroxisome assembly protein 2; Found in the gene: LotjaGi3g1v0368100 LjG1.1_chr3 75447861 75450699 -
2 domain predictions
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LotjaGi5g1v0046000.1
n.a. RING/U-box superfamily protein; TAIR: AT2G26350.1 peroxin 10; Swiss-Prot: sp|Q9SYU4|PEX10_ARATH Peroxisome biogenesis factor 10; TrEMBL-Plants: tr|K7MNE6|K7MNE6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0046000 LjG1.1_chr5 7751711 7761982 -
2 domain predictions
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