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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR007647
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 6 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 7.531s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0167619.1
n.a. PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like [Glycine max] gi|356520824|ref|XP_003529060.1| chr0 79780647 79785353 -
2 domain predictions
1 GO term
Lj6g3v2041910.1
n.a. PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Glycine max] gi|356530409|ref|XP_003533774.1| chr6 24025974 24033852 +
2 domain predictions
1 GO term
LotjaGi1g1v0377700.1
n.a. DNA-directed RNA polymerase subunit beta; TAIR: AT3G23780.1 nuclear RNA polymerase D2A; Swiss-Prot: sp|Q9LK40|NRPD2_ARATH DNA-directed RNA polymerases IV and V subunit 2; TrEMBL-Plants: tr|A0A0B2RBE2|A0A0B2RBE2_GLYSO DNA-directed RNA polymerase subunit beta; Found in the gene: LotjaGi1g1v0377700 LjG1.1_chr1 85736272 85742300 -
2 domain predictions
1 GO term
LotjaGi3g1v0300900_LC.2
n.a. DNA-directed RNA polymerase subunit beta; TAIR: AT5G45140.1 nuclear RNA polymerase C2; Swiss-Prot: sp|F4KD38|NRPC2_ARATH DNA-directed RNA polymerase III subunit 2; TrEMBL-Plants: tr|K7L1D3|K7L1D3_SOYBN DNA-directed RNA polymerase subunit beta; Found in the gene: LotjaGi3g1v0300900_LC LjG1.1_chr3 62700110 62703938 +
2 domain predictions
1 GO term
LotjaGi5g1v0334100.1
n.a. DNA-directed RNA polymerase subunit beta; TAIR: AT5G45140.1 nuclear RNA polymerase C2; Swiss-Prot: sp|F4KD38|NRPC2_ARATH DNA-directed RNA polymerase III subunit 2; TrEMBL-Plants: tr|K7L1D3|K7L1D3_SOYBN DNA-directed RNA polymerase subunit beta; Found in the gene: LotjaGi5g1v0334100 LjG1.1_chr5 65089450 65124594 +
2 domain predictions
1 GO term
LotjaGi6g1v0332200.1
n.a. DNA-directed RNA polymerase subunit beta; TAIR: AT4G21710.1 DNA-directed RNA polymerase family protein; Swiss-Prot: sp|Q42877|RPB2_SOLLC DNA-directed RNA polymerase II subunit RPB2; TrEMBL-Plants: tr|V7BQ99|V7BQ99_PHAVU DNA-directed RNA polymerase subunit beta; Found in the gene: LotjaGi6g1v0332200 LjG1.1_chr6 64717869 64726425 +
2 domain predictions
1 GO term