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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0332200 |
| Transcript ID | LotjaGi6g1v0332200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | DNA-directed RNA polymerase subunit beta; TAIR: AT4G21710.1 DNA-directed RNA polymerase family protein; Swiss-Prot: sp|Q42877|RPB2_SOLLC DNA-directed RNA polymerase II subunit RPB2; TrEMBL-Plants: tr|V7BQ99|V7BQ99_PHAVU DNA-directed RNA polymerase subunit beta; Found in the gene: LotjaGi6g1v0332200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:64717869..64726425) extracted from Lotus japonicus Gifu genome v1.2.
CACCACTCCATCTCATTCTACAATTCCTTTGAACCCTCACCCCAAATCGGGTACGTTCCTCTGCTAGGGTTTCACTCTCT GCAAACCCCGAAACGCCAAAACTTGAAAATCAAACAGAAATTGGAACGAAAAAGCTTAATTTGAACAAAACCTAACGTAA ATTCGGAAGAAAACAAACCATGGATTTGGAAGAGGAACAAGAGTACGATCAGCAAATGATGGAGGAAGAAGACGATGAAG ATGAAATCACACAGGAAGATGCGTGGGCTGTGATTTCTGCTTACTTCGAAGAGAAGGGTCTGGTTCGTCAGCAGCTTGAT TCCTTCGATGAGTTCATCCAGAACACTATGCAGGAAATCGTCGATGAATCTGCTGACATTGAAATTCGACCTGAGTCTCA GCATAATCCCGGTCACCAATCCGATTTTGCAGAGGTACTGTTTCATCTTCATCTTCTTCTTCTTTGCAATTGAACTCTGA GCTTAACTGTAACTTGGGTTTGGGTTATTTTGTTGCAGACAATTTACAAGATTAGCTTCGGTCAGATTTACTTGAGTAAG CCCATGATGACTGAGTCTGATGGAGAAACTGCCACCTTGTTTCCCAAGGCAGCTAGGTTAAGAAACCTCACCTATTCAGC TCCTCTCTACGTTGATGTCTCCAAAAGGGTTATCAAGAAAGGGCATGATGGTGAAGAGGTTACTGAGACTCAGGATTTCA CCAAAGTTTTCATCGGCAAGGTTCGTGTCCGTGTCTCAGTTTTAGATGCTATAGTTAATTTCAGTGTTGAGTATTGACTG CTAAACTTAAGCTCAAGTTGTGTTTTGTTGTTGTTAGGTTCCTATTATGCTTCGGTCTAGTTATTGTACGTTGTACCAGA ATTCAGAGAAGGATTTGACTGAGCTTGGAGAGTGTCCGTATGATCAAGGTGGATATTTCATTATCAATGGGAGTGAGAAG GTTCTCATTGCTCAGGAAAAGATGAGCAGCAATCATGTCTATGTCTTCAAGAAGAGACAGCCTAACAAGTATGCTTATGT GGGTGAAGTTCGGTCCATGGCAGAGTCTCAGAACAGACCACCCAGTACTATGTTTGTGCGCATGCTCTCTCGAACTAGTT CCAAAGGGGTAATGCGAATTGTTGTTGCATTTTTTCCATGAGTTGTGTTATGTGATGAGAATTCACTGTTTTCACTTGGT TTGGTATCTGCTACAATGTTTAAGTTTATGCCTTTTATTCCTTCAGGGTTCTTCAGGACAGTATATACGAGCTACTCTGC CATACATTCGAACTGAAATTCCCATCATTATTGTGTTTCGAGCACTGGGGTTTGTCGCCGACAAAGATATACTTGAACAT ATATGCTATGATTTCTCCGATACTCAAATGATGGAGTTGCTTCGTCCTTCCCTGGAAGAAGCATTCGTAATTCAAAATCA GCAGGTTGGTTCTGATGTGGTTATATTTTGCTTACAGCCAAGATTATGCTTGCTTATTTGGACTTTATATGAACTTCAAG CGATATCATTGTACAATCCCAGCCCATTTCAGTCTTGGACATATTCCTTTATTTAGGGGCTGTTTTAGTCTTTTATTCAT GTATTGCATTTTCCTTGCAACCCTGGTTAATAATGTCTTCTCTCTGTAATTCTTTCCTTTTTTTTGATATAATTTCCCTA TCTTAATGCATTTCCCTTCCGTATTGTGTCATCTGGTTTTGTAGTCACATGTTTTATCTTTTTTAAGTTCAGGTGATTAA AAAACTGTTATTATTCGTGAAACATTTTATTATCTAATGCACAGTTTTCATGATACGCCATTTATAAGCAACTTTGTTTT AATTTACTGTATATTTGTCTCTGTCCCAGGTTGCCCTTGACTACATTGGTAAAAGAGGAGCAACTGTCGGTGTAACCAAG GAAAAGAGAATTAAGTGAGTAGAGTTTTATATTTATTGACAAAGCCTGAGGATGATTGTCGTGCACCCATTTGTTGAGGT TACATTTGTATCATAATCTACAGGTATGCTAAGGAGATCCTTCAAAAGGAGATGCTTCCTCATGTAGGTGTTGGAGAATA TTGTGAGACGAAGAAAGCGTACTATTTTGGGTAAGTTTGTTACTAGAAAATCTTGGGTTTTTCATTTGATGACTTTGTAA GTATTTATTAGTGTTACACTTATCATTCCCCCAGGTATATAATCCACCGACTACTTCTATGTGCACTTGGCCGGAGGGCT GAAGATGACAGGGATCATTACGGCAACAAGAGGCTGGACCTGGCTGGTCCTTTGCTTGGTGGTCTCTTTAGAATGGTTTG TTTTTCTAGTTATTAATGTTGTTTAACTTAATTTTCCTTGTTATGTTATAATTCTGTTTCTCAATTCCTGGTTATAACTT TTGATGCAGCTATTCAGAAAACTAACTAGAGATGTCAGGGCTTATGTGCAGAAGGTTTGTCCTTGCTTTAAATTACATCT GTTTTTGCATTCATTCTGCGTTATCTATAACCTTCTCCACCTCATGAATGTTGCAGTGTGTTGATAATGGAAAAGATGTT AACTTGCAATTTGCTATAAAAGCAAAAACCATCACAAGTGGACTTAAATACTCACTTGCTACTGGTAACTGGGGGCAGGC AAATGCTGCTGGTACTAGAGCTGGGGTTTCACAGGTTTAAATATAAATTATTGCATGATTTTTTAATTTGACGTTCTTGC CCTCTTTTATATAGAGGATATAATGTTAACATTTATCTTTTTGTTCCTCCAGGTTCTAAATCGTTTAACTTACGCCTCCA CTTTGTCTCACTTGCGGAGACTGAATTCCCCCATAGGGCGTGAAGGTAAAATTAGTTGGCTTTCCTAGAATAACTGAGCC TTCGATTCCTCCTGCAGTATTATTTCTTTCTTGTATTGTAGTTTTTACTGTTTTCCCTCCCTTTTATTTTAGGAAAGTTG GCTAAACCAAGACAGCTGCATAATTCACAATGGGGAATGATGTGTCCAGCAGAAACGCCGGAAGGACAAGTGAGTTTTTG CTTTCTAAACTTCCAATATTTGATGAAATTATAAAATTTAGTCTTTGATGTTTAGAAAGTGGAAAAAGAAATGCAGAGCA TAAAATTGTATTGATATAATATATAATATATTAGGCTTGATCTTACAAAAGATATAACATTTACCCTTATTTACAGTGGT AGATTCCTAATCCAAATACGGAAACAAAACAATATAAATAAGGAATTAAAGAAGCTGACCCTAAACAATAATATAAATTA CCTCAGAGTACTCTAAGACATGATCAAGATATTATAAGAGATCTTTTTTATGTTCTAAAATTTACTATTTGCTGTTGGCA ACTTATCTTTCTCTGGTATTGATGAGTGTGATTGCGCTATTGTATAGGCCTGTGGACTGGTGAAGAATCTGGCTCTGATG GTCTATATTACAGTTGGTTCAGCAGCATATCCTATTCTGGAGTTTTTAGAAGAATGGGGCACAGAAAATTTTGAGGTGCT TATGGTTTCCTGAATTATGTTCATTTGTTCCTCTCTCTTTATGATTTCTGCGTTCTAAATTGTTTATTTTCCCTTTACCG TAGGAAATTTCACCTGCAATAATTCCCACAGCTACAAAGATTTTCGTAAATGGTTGCTGGGTGGGTATCCATCGCGACCC TGATATGTTGGTGAGAACATTGAGAAAGCTGAGACGCCGGGTAACTATTCGTTTCACTTTCTGATTTCATTAAGAATTTG CATTTGTATTTGAATATAACTGTTAACAAATAGCACGCGCGCACACTTGACACACCCCAAAAAAAAAGCTTGTAAAGGAA TGGTATTAGGTACTTATCAGTATAATTTTTTAATTGAGTTGTTTATTATCTAGTATAAGAAAATATTATAAGAACTGTAA AGATCTCTGAATCAATATCAGTTATTTTCCATTTTAAAAATTGGTTTCCACAATTTAATCCCAACAAGGCCAGATGTGAT CGCTTATTTTAAAACCTCGTACATATGTTTATAAGAGTATTTGTTATATTACTGTTTTTTACAGGAGGCTGTAGTGTGGG TAATTTTTTTTTTCAAAAAGTTGCTTTAGTCAACTTCTGTTTTGAGTCATCTGAATCCATAATTTATTAAAGTTCTTTTG GGATGTGATTTATCATAATTGTTTAGATATTCCAAATGCTATTTTTAATTGTGGTTTGGTGCCGAATGCTCTTCATATTG TGTAGGTTGATGTTAATACTGAAGTTGGGGTTGTCAGAGATATCCGTCTTAAGGAGTTGCGCATATACACTGATTATGGT CGCTGCAGTCGTCCTTTGTTCATTGTGGATAAACAAAGGCTTCTCATAAAGAAAAAGGATATTCATACTTTGCAACAGAG GGTGAGTAGTAACTTCATGTATCTTAGCAGTTGATGATGTTTCAGTAATTGCTTAACTTGTTATTCAATTTCTTCAGGAA ACCCCTGAAGACGGTGGATGGCATGATCTAGTGGCCAAGGGCTTTATAGAATATATTGACACTGAAGAAGAAGAGACTAC AATGATTTCCATGACAATTAATGTCAGTATTACAATCCCAGATTTGGAAAATACCCTTTATAATTTAGTTCGTCAATGCA AATTAAGAGGATGAAAAGCAATTAAGAAAATGATTATTGAATAAATGTAACAGGATCTTGTACAAGCAAGGTACAATCCA GAAGATGCGTATTCTGATACTTACACTCACTGTGAAATCCACCCATCTCTGATTTTGGGTGTATGTGCTTCCATCATACC ATTTCCTGACCACAATCAGGTAAATTTGGTACTTTGCTGTGTACTCATTCTGATTGATACACATCATAATCTGACTTGCC TTCGGCTGCAATCAGTCCCCACGTAATACGTATCAGTCTGCAATGGGAAAACAAGCGATGGGAATATATGTTACCAACTA CCAGTTCCGAATGGTACTTTTCACATCTTTATATGATTCACGTGTGCCTTTTCTTTGATTTGTATATTATACTGGATAAT TGATACTGGATTCTACTTCTTTTGCTCCAATACACAGGATACCTTGGCCTATGTATTATATTATCCTCAAAAGCCACTGG TCACTACAAGAGCCATGGAGCATCTCCATTTCCGCCAACTCCCAGCTGGAATTGTAAACTCTTGCTTCTCTTATTTTGAT CATTTTGACATTATGTTGATAAAATGTTCTGATATGCTGATCCCTTGTGCTTTAGAATGCCATTGTGGCCATTGCCTGTT ATTCTGGTTATAATCAAGAAGATTCTGTCATCATGAACCAATCATCAGTGGACCGTGGATTCTTTCGGTCTCTGTTTTTC CGTTCATATAGGTGTGTTTGCTTCCCATATGAATTATACATTCACTCTTTTCTATTTCTGTGCTAGCAATTTTCTGATAT GGTGCAAAACTTTTACAGAGATGAAGAGAAGAAGATGGGAACACTCGTCAAAGAAGATTTTGGTCGGCCAGACAGAGCTA ACACCATGGTGAGAATATTTGTGTGTGTGAAAGGCTTTCTTATGTGAGAGTGATGGGAGTAAATTTTAACTGTCAGATCG AACTATAAATAGTCATGAGATCATGAGAGTTTCTTAAAAAATGACCGACATTTTAAGTGGTCATGTGACCATTAAATACA TTTTAATCTTGACTATCCATTTATGGTTGTATTGTATAACAAAAAAAATATCTCTCCCACTCACAAAAAAGATTCTTCTA ACTAGATACATCCCCTAAATATAAATATCTATTTTTGGTTTATAACAAAATTGCATTTTGCAGGGTATGAGGCATGGTTC TTATGATAAGCTTGATGATGATGGTCTTGCGCCACCAGTAAGCATAAAATTTGACAACTTCCTGACCAATCTGTCCCAAA ATGAAAATTTATATTAACTGAAGTAATTTATTGCTTTAAAATAGGGCACAAGGGTATCTGGTGAGGATGTTATTATTGGA AAGACCACCCCTATATCTCAGGAGGAGGCACAGGGTCAAGCATTGCGTTACACAAGACGTGATCACAGCATTAGCTTACG CCATAGTGAAACTGGAATTGTTGATCAAGTGAGTTCATCTCATTTGTTTACTTTCTTGTGTTGCAAATTAAGTTTATGCC ATGTTAGGATAGCTTAATGGATTTCAGTTTGAAAATAAGGATTAACTTGACAAAAACAAAATGTTGACATCTGAAGTAAA GAGCATATTAATATACCGAAATCCTGAATTATTATCATAACTTTCTTTTCATTGCTGGATGTATGTATTTTCTATTTTGT AGGTTCTGCTGACAACAAATGCTGACGGGTTGAGGTTTGTGAAAGTAAGGGTGAGATCTGTTCGTATACCACAGATTGGT GACAAGTTCAGTAGTAGACATGGGCAGAAGGGGACAGTTGGTATGACTTATACACAAGAAGACATGCCCTGGACTGTGGA AGGCATTGTCCCTGATATTATTGTCAATCCACATGCTATTCCTTCTCGAATGACAATCGGCCAGCTTATTGAGTGTATCA TGGGAAAGGTGGCTGCCCACATGGGAAAAGAAGGAGATGCAACACCTTTTACGGATGTTACTGTAAGTAGTAGCATGTTC TCTCTATCAAATTTCTTTCATGTAAAAACTCGATACTTGTCAGAAATTGGAACTACTTGCATAATTAATCCACTTCAGCT GCTCCTTTTGGATCTTGTTTTATAGTATTACCCGTCCAGCCCATTCAGATGTATGGGAAAAACTGGTAGACCATGTGTGC TCTAGTGGTATATATATTATATTATGAGGATGCTGTTATACTGCTCACACGTCCATAACTATGCAATATGCCATTCAATA CTTGATTAAAACCTAATCATGTAATCTACTTGAGATAAAAAACAAGTGTCTTTAGTGGTGAATAAATTCTATCTTCCATG AAAGGCCTCAGTCACAATTATTCCTGTACTCATCCTTGTCAGAAATTAACACGGTAGAATATTTGCTCTATGGGTTAATC TCAAGATATCTTTTTAGTTTATGTTTAAAGTTACATCATTTTTTTTACTACTGCATTCCAGGTGGATAACATCAGCAAAG CTCTACACAAATGTGGCTACCAAATGCGTGGTTTTGAGACTATGTACAACGGTCATACAGGGAGGCGTCTCAGCTCAACC ATTTTCCTTGGCCCTACATATTACCAAAGACTGAAGCATATGGTTGATGACAAGATCCATTCTCGAGGACGAGGTCCTGT GCAGATCCTCACTAGGCAACCAGCTGAGGGACGCTCACGTGATGGAGGTCTCCGTTTCGGAGAGATGGAACGTGATTGCA TGATAGCCCATGGAGCTGCTCACTTCCTAAAGGAAAGATTGTTTGATCAAAGTGATGCATATAGGGTCCATGTGTGTGAA CGCTGTGGATTGATAGCTATTGCAAATCTCAAGAAGAATTCTTTTGAGTGCAGGGGGTGCAAGAACAAAACCGACATTGT TCAGGTGAAAGATTTTTACCTGTTCTGCATTATTGTTCAGAAGTCCTATGTTTTCCTTGTGCTGAATATTTGATTCTGAT TGTATATGTAGGTTTATATTCCTTATGCTTGTAAGCTGCTTTTCCAAGAGCTGATGGCTATGGCCATAGCTCCAAGAATG CTTACCAAGGAGGTGAAATCTATGAAAGACCAAAAGAAGAAAGGAGCCTGATAAGTATGTTTTGAGTAAAGCCACTTGTC TTGTTCCATCCTGTCTTGCACCTCTTGGGAATATGGAACACGCATGGGATCTGAAAATTGTTTTCTCAAAGCTGATTATG AGATTGGATGCTGTTGTTTCCACTTGCACTGAGGTTGATGCGGCATTTGTTTTTACTTTTCCCTATTCAATTCAAAGGGT GCTCATTCCTAGCTACTTATACCGTAGAACATTGTATATATACAATGTAAGAGATGTTTAAAGATAATCAGAGAACCTGT TTCTTATCTGCTAAGCAGAGATGGGTTAGCGGAAGTTTCTGTTACTCGAATTTGGTTAGCTCTATCAAAAAATGAAGCTA TAAACTGAGAAATTTTGTTATAGGTGCTGGCTTCTTGAATTTGTGTTGCCAATTTACCATTAACTTTGTAGCTCTTATCT TAGACTGTGAATGTGTAAGTTTATATTTTATATAAAAAATTAAAAACTTCATCTGAGTTGGATTCATTGATGCAATACAT GGGAACTTAGGATATTTTATTTTCCAAAACCCCTGCAATATATTTGCACTTGTAACATTTTGTTTCAATTCTTTTACAAT TCAATGGAATGAGATAATCTATCTCAAGTCTTTTTTTTAATATCAAGTCTTTCAGTTGGGGTTTTCTGGCGATTCTGATC CCGAAGGCCTAAGTTTAAGGCTCAGTTTTCTAATTCTATCAAAATCTCAAACAAACTAACCTAACTTTATTTTGAAGAAG TATTATCCTCGTAGAACATATTTTGAAAGAACTTTTTACAAAACAAATATTTTTCATAATTAATCTTTGAGAAGGTA
CDS sequence (LotjaGi6g1v0332200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATTTGGAAGAGGAACAAGAGTACGATCAGCAAATGATGGAGGAAGAAGACGATGAAGATGAAATCACACAGGAAGA TGCGTGGGCTGTGATTTCTGCTTACTTCGAAGAGAAGGGTCTGGTTCGTCAGCAGCTTGATTCCTTCGATGAGTTCATCC AGAACACTATGCAGGAAATCGTCGATGAATCTGCTGACATTGAAATTCGACCTGAGTCTCAGCATAATCCCGGTCACCAA TCCGATTTTGCAGAGACAATTTACAAGATTAGCTTCGGTCAGATTTACTTGAGTAAGCCCATGATGACTGAGTCTGATGG AGAAACTGCCACCTTGTTTCCCAAGGCAGCTAGGTTAAGAAACCTCACCTATTCAGCTCCTCTCTACGTTGATGTCTCCA AAAGGGTTATCAAGAAAGGGCATGATGGTGAAGAGGTTACTGAGACTCAGGATTTCACCAAAGTTTTCATCGGCAAGGTT CCTATTATGCTTCGGTCTAGTTATTGTACGTTGTACCAGAATTCAGAGAAGGATTTGACTGAGCTTGGAGAGTGTCCGTA TGATCAAGGTGGATATTTCATTATCAATGGGAGTGAGAAGGTTCTCATTGCTCAGGAAAAGATGAGCAGCAATCATGTCT ATGTCTTCAAGAAGAGACAGCCTAACAAGTATGCTTATGTGGGTGAAGTTCGGTCCATGGCAGAGTCTCAGAACAGACCA CCCAGTACTATGTTTGTGCGCATGCTCTCTCGAACTAGTTCCAAAGGGGGTTCTTCAGGACAGTATATACGAGCTACTCT GCCATACATTCGAACTGAAATTCCCATCATTATTGTGTTTCGAGCACTGGGGTTTGTCGCCGACAAAGATATACTTGAAC ATATATGCTATGATTTCTCCGATACTCAAATGATGGAGTTGCTTCGTCCTTCCCTGGAAGAAGCATTCGTAATTCAAAAT CAGCAGGTTGCCCTTGACTACATTGGTAAAAGAGGAGCAACTGTCGGTGTAACCAAGGAAAAGAGAATTAAGTATGCTAA GGAGATCCTTCAAAAGGAGATGCTTCCTCATGTAGGTGTTGGAGAATATTGTGAGACGAAGAAAGCGTACTATTTTGGGT ATATAATCCACCGACTACTTCTATGTGCACTTGGCCGGAGGGCTGAAGATGACAGGGATCATTACGGCAACAAGAGGCTG GACCTGGCTGGTCCTTTGCTTGGTGGTCTCTTTAGAATGCTATTCAGAAAACTAACTAGAGATGTCAGGGCTTATGTGCA GAAGTGTGTTGATAATGGAAAAGATGTTAACTTGCAATTTGCTATAAAAGCAAAAACCATCACAAGTGGACTTAAATACT CACTTGCTACTGGTAACTGGGGGCAGGCAAATGCTGCTGGTACTAGAGCTGGGGTTTCACAGGTTCTAAATCGTTTAACT TACGCCTCCACTTTGTCTCACTTGCGGAGACTGAATTCCCCCATAGGGCGTGAAGGAAAGTTGGCTAAACCAAGACAGCT GCATAATTCACAATGGGGAATGATGTGTCCAGCAGAAACGCCGGAAGGACAAGCCTGTGGACTGGTGAAGAATCTGGCTC TGATGGTCTATATTACAGTTGGTTCAGCAGCATATCCTATTCTGGAGTTTTTAGAAGAATGGGGCACAGAAAATTTTGAG GAAATTTCACCTGCAATAATTCCCACAGCTACAAAGATTTTCGTAAATGGTTGCTGGGTGGGTATCCATCGCGACCCTGA TATGTTGGTGAGAACATTGAGAAAGCTGAGACGCCGGGTTGATGTTAATACTGAAGTTGGGGTTGTCAGAGATATCCGTC TTAAGGAGTTGCGCATATACACTGATTATGGTCGCTGCAGTCGTCCTTTGTTCATTGTGGATAAACAAAGGCTTCTCATA AAGAAAAAGGATATTCATACTTTGCAACAGAGGGAAACCCCTGAAGACGGTGGATGGCATGATCTAGTGGCCAAGGGCTT TATAGAATATATTGACACTGAAGAAGAAGAGACTACAATGATTTCCATGACAATTAATGATCTTGTACAAGCAAGGTACA ATCCAGAAGATGCGTATTCTGATACTTACACTCACTGTGAAATCCACCCATCTCTGATTTTGGGTGTATGTGCTTCCATC ATACCATTTCCTGACCACAATCAGTCCCCACGTAATACGTATCAGTCTGCAATGGGAAAACAAGCGATGGGAATATATGT TACCAACTACCAGTTCCGAATGGATACCTTGGCCTATGTATTATATTATCCTCAAAAGCCACTGGTCACTACAAGAGCCA TGGAGCATCTCCATTTCCGCCAACTCCCAGCTGGAATTAATGCCATTGTGGCCATTGCCTGTTATTCTGGTTATAATCAA GAAGATTCTGTCATCATGAACCAATCATCAGTGGACCGTGGATTCTTTCGGTCTCTGTTTTTCCGTTCATATAGAGATGA AGAGAAGAAGATGGGAACACTCGTCAAAGAAGATTTTGGTCGGCCAGACAGAGCTAACACCATGGGTATGAGGCATGGTT CTTATGATAAGCTTGATGATGATGGTCTTGCGCCACCAGGCACAAGGGTATCTGGTGAGGATGTTATTATTGGAAAGACC ACCCCTATATCTCAGGAGGAGGCACAGGGTCAAGCATTGCGTTACACAAGACGTGATCACAGCATTAGCTTACGCCATAG TGAAACTGGAATTGTTGATCAAGTTCTGCTGACAACAAATGCTGACGGGTTGAGGTTTGTGAAAGTAAGGGTGAGATCTG TTCGTATACCACAGATTGGTGACAAGTTCAGTAGTAGACATGGGCAGAAGGGGACAGTTGGTATGACTTATACACAAGAA GACATGCCCTGGACTGTGGAAGGCATTGTCCCTGATATTATTGTCAATCCACATGCTATTCCTTCTCGAATGACAATCGG CCAGCTTATTGAGTGTATCATGGGAAAGGTGGCTGCCCACATGGGAAAAGAAGGAGATGCAACACCTTTTACGGATGTTA CTGTGGATAACATCAGCAAAGCTCTACACAAATGTGGCTACCAAATGCGTGGTTTTGAGACTATGTACAACGGTCATACA GGGAGGCGTCTCAGCTCAACCATTTTCCTTGGCCCTACATATTACCAAAGACTGAAGCATATGGTTGATGACAAGATCCA TTCTCGAGGACGAGGTCCTGTGCAGATCCTCACTAGGCAACCAGCTGAGGGACGCTCACGTGATGGAGGTCTCCGTTTCG GAGAGATGGAACGTGATTGCATGATAGCCCATGGAGCTGCTCACTTCCTAAAGGAAAGATTGTTTGATCAAAGTGATGCA TATAGGGTCCATGTGTGTGAACGCTGTGGATTGATAGCTATTGCAAATCTCAAGAAGAATTCTTTTGAGTGCAGGGGGTG CAAGAACAAAACCGACATTGTTCAGGTTTATATTCCTTATGCTTGTAAGCTGCTTTTCCAAGAGCTGATGGCTATGGCCA TAGCTCCAAGAATGCTTACCAAGGAGGTGAAATCTATGAAAGACCAAAAGAAGAAAGGAGCCTGA
Protein sequence (LotjaGi6g1v0332200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDLEEEQEYDQQMMEEEDDEDEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQ SDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVSKRVIKKGHDGEEVTETQDFTKVFIGKV PIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLIAQEKMSSNHVYVFKKRQPNKYAYVGEVRSMAESQNRP PSTMFVRMLSRTSSKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQN QQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRL DLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT YASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFE EISPAIIPTATKIFVNGCWVGIHRDPDMLVRTLRKLRRRVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVDKQRLLI KKKDIHTLQQRETPEDGGWHDLVAKGFIEYIDTEEEETTMISMTINDLVQARYNPEDAYSDTYTHCEIHPSLILGVCASI IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQ EDSVIMNQSSVDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKT TPISQEEAQGQALRYTRRDHSISLRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQE DMPWTVEGIVPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHT GRRLSSTIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDA YRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVYIPYACKLLFQELMAMAIAPRMLTKEVKSMKDQKKKGA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 23 | 23 | - | – | |
| Coils | 6 | 26 | 21 | - | – | |
| PANTHER | 11 | 1187 | 1177 | 0.0 | – | |
| PANTHER | 11 | 1187 | 1177 | 0.0 | ||
| SUPERFAMILY | 21 | 1182 | 1162 | 0.0 | – | |
| Gene3D | 32 | 215 | 184 | 5.1E-13 | – | |
| Pfam | 40 | 449 | 410 | 1.4E-75 | ||
| CDD | 41 | 1178 | 1138 | 0.0 | ||
| Pfam | 209 | 401 | 193 | 1.8E-57 | ||
| Gene3D | 216 | 387 | 172 | 1.8E-82 | ||
| Gene3D | 388 | 572 | 185 | 1.1E-44 | – | |
| Pfam | 474 | 538 | 65 | 1.8E-25 | ||
| Pfam | 573 | 634 | 62 | 2.3E-21 | ||
| Pfam | 659 | 710 | 52 | 1.1E-18 | ||
| Pfam | 717 | 1087 | 371 | 8.1E-127 | ||
| Gene3D | 718 | 1073 | 356 | 9.0E-163 | ||
| Gene3D | 748 | 936 | 189 | 9.0E-163 | ||
| ProSitePatterns | 940 | 952 | 13 | - | ||
| Gene3D | 1074 | 1182 | 109 | 3.7E-48 | – | |
| Pfam | 1089 | 1180 | 92 | 1.2E-36 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). | ||
| Molecular function | DNA-directed 5'-3' RNA polymerase activity | Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo'. | ||
| Biological process | Transcription, DNA-templated | The cellular synthesis of RNA on a template of DNA. | ||
| Molecular function | Ribonucleoside binding | Interacting selectively and non-covalently with a ribonucleoside, a compound consisting of a purine or pyrimidine nitrogenous base linked to ribose. |
Expression pattern of LotjaGi6g1v0332200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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