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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0377700 |
| Transcript ID | LotjaGi1g1v0377700.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | DNA-directed RNA polymerase subunit beta; TAIR: AT3G23780.1 nuclear RNA polymerase D2A; Swiss-Prot: sp|Q9LK40|NRPD2_ARATH DNA-directed RNA polymerases IV and V subunit 2; TrEMBL-Plants: tr|A0A0B2RBE2|A0A0B2RBE2_GLYSO DNA-directed RNA polymerase subunit beta; Found in the gene: LotjaGi1g1v0377700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:85736272..85742300) extracted from Lotus japonicus Gifu genome v1.2.
CAACACTCCAACACTCCATAGAGAGTGAGCTTGAAGAACAAACCCTCTGAACCAAAACCCTAACCCCCTTTCCTTCCATT TCCGATGGGTCACATTGGTAGCAGCAAGGACGGCATTGGCATCAACCTCGACGACGACATCGTCGACGCCATGGACGTCG ACGTCGACTTCGACCTCGACGACGACGACGAAGATTCCTCTTCCAACGCCGAGATTCTCAAGGAGCTAGGAGAAGACATG GTCAAGCATTTCTGCACCAAAGCTTCCAGAATGTTCTTCGACGAGCACGGCCTCGTCAGCCACCAGATAAACTCCTACAA CCAGTTCATCGCCGCCGGTCTTCAAGCCGCGTTCGATGCCTTCGGCGACCTCAATGTCACGCCCAGCTACGATCCTTCCA AGAAGGGTGACAACGAGCATTTCAAATACGCCACCGTCAAGTTCGGGAAGGTAACGCTTGATCGGCCGAAGTTCTGGGGC GGCGCGGCGAATGCTCAGGAGTTTAAGATGCTTCCGAGACATGCACGCCTTCAGAGGATGACTTATGCTGCTAAAATGAA AGTCACTGTTGAAGTTCAGGTGAGAATGTTAGCTATTCACTGTGAAAATGAAAATGAGGTTATGGGTTGGTGTTGTTTTT TGGTTTCTGATGGGTTTGATTTGAAATTTGTGGCTGGGTTGGTTTGTTGTTTGTTTTTGTAGGTGTTTACGCCGCATAAG GTTCGGAGTGATAAGTTTAAGACTGGGAAAGAAGATTACATTGACAGAGAGATTATAAAGGAAGATAAGAGAGAGATAAT TATTGGGAGATTGCCTGTTATGGTTATGTCTGATCTGTGTTGGATGAAGGAAGCTGAAAAGGGTGATTGCGATTTTGATC ACGGAGGCTATTTCTTGATTAAGGGTGCTGAGAAGGTTAGCTCTGTTTGATTTATTTCGAAAGTTTTATGTCCTGCCTGT TTTAGTTTTTATGCTTCTCGGTGCTGTAATTTTGGTTTCGGTTGTATTTGTATTCATGTGTTTGATTTTTTAGGTAGATA TTTGTTGTGTTTTGACATTAACTTTACTTGCTTTTTTTGTGAAATTGTTTGGTCATTTGTGTGCAAAATTGTTGCAGGCC TTTGTTGCACAGGAACAACTATTTCTTAAGAAGCTCTGGGTTTCAAATACTCCAGATTGGGCAATTGGGTACAAGTCGCT GAACAAGCGAAATCGGTTGATTCTGAAACTTGTTGGCAATTCCAAATTTGAAGAAATAAACAATGGGGAGAAGGTCCTGA GTGTTTATTTCTTGGGTGTGGAGGTTCCCGTATGGATACTGTTTTTCAGTCTTGGCGTCTCATCAGACAAAGAGATCATA GATCTCATTGATTATGGGAATGAAGATACCCAAATTCAGAATATCTTCTTTGGATCCATTCGTGATGCCGATGAGAAATG TTCTGGTTTTCGTAAAGGGAAGAACGCACTGCACTACATGGAGGAACATGTGAAAGGTATCCAGTATCCTCCTTCAGAGT CTATGGAGGAGTGCCTGAACTTGTACCTCTTTCCTGGCAGCAGCGGTTTGAATAGGAAGGCACGCTTCCTTGCGTATATG GTGAAGAGTCTGTTGCTTGCATATACGGGCCGCAGAAAATGCGATAACAGGGATGATTTCCGCAATAAGAGGTTTGAGTT GGCTGCTGAGCTGCTTGAGCGTGAGCTGAAAGTGCACTTTGCACACGCCCGAAAGCGAATGTCTAAGGCTTTGCAGAGAG ATCTGAATGGAGATCGTGATGTGCGCCCAATTGAGCACTATCTCGATGCTTCAATTATTACCAATGGTCTCCAAAGGGCC TTTTCCACTGGAGCGTGGACTCATCCTTATAAAAGGTTAGAAAGGACCTCTGGTGTTGTTGCAAATCTTGGGCGAACTAA TCCATTACAGACCATGGCTGAATTAAGAAGAACAAGGCAACAAGTTCAGTACACTGGAAAGGTTGGGGATGCTAGATACC CGTAAGTTACTTTAAGCTTTGTCTATTTTAGTTCTTTGATATTATTATTTTCTTTATCTTTAGTTGTGCTGTGGGTGAAT AAGTTCTTCCATTTATTGTAACGCAAGTTTGTTGTTGCAGGCATCCTTCTCACTGGGGCAAGGTCTGTTTCCTCTCTACC CCGGATGGTGAAAATTGTGGACTAGTAAAAAATTTGTCTGTCACAGGACTAGTGAGTACAAACATAAGTGAATCTATATT TCCTCAGTTGCTTGATTGTGGAATGGAAGAGCTTGTTGATGATACTACCACTTTTCTGAGCAAAAAAGACAAAGTCTTCC TAAATGGGGATTGGGTTGGAGTTTGTCCAGATCCAATTTCATTTGTGGCAGGTCTACGGAGTAAAAGGCGTAGAAATGAA TTGCCACACCAGGTTCACTTTTAATCTCCCATTTTAAGTTGGTTTTCTATTCTATAATAGTCATACTTCATATATTTTAT AGAATGTGATTTTCATTTAAGCCATGTAGAGGACCCATTGAGTGGAAAAATGTGTTTATTGTTGTTGTTTTTGTATGCTA TAAATTTGAGCCATACATTGTCAAATGTTGTAAAGGCTGGCAGGTTCAATAGCTTAAAGCATGTCTTCCTGCCGAGTGGA TGAAGCCTTAATTAACAAATAATATAGTTATTGATTACATTTGGAAACTTAGTCTCTTATCGGGTAATAATTGTGGAACT TTCTTTATGTCTAAGATATGGTATATGTTTCACGTGATTGGATTAACTGTTTGAACTTTGCTTTCAGTTGTCTCTCTCTT TACACTCATCAATAACTTGTCATTATATCAGGTTTGGGTATCTTTATTGTTTTGATGAGGTTGTTGCTCTCCTCTGCTGG GTATTTTTTAAATTAACTTTGCGAGGGAGATACCTTTCGTCACAAGCCTTCTATTGTATATTGTGTGGCTAATTTTGTTT TTCTGGAGGCTGCTGTATTAGCAATAAAATTGTATGATTTAGGCTGCATTTGGAAGAGAGCTTATTTGAGCTTATCTTAG CATAAGCACTTATGCAAGTGTTTGGGTAAGTTTATGAAAATAGCTTATGACCTACCTATAAGTTGTTTTGAGCTTATTTT GATCTTATTTCCATAAGTTGCTCAGACTAGCTTATGAAAAAGCACTTATATTTAATCTACCTATAAGCTGTTTTTAGCTT TTTTTTCAGTAAGCTTCTCAAATAAGGTTGGGTAAGTGGTTGTTGCCTTAAGTGCTTAATTAAACAGTTTCCCCAAACAC ACCCTTTGTTGATTTGTCTCAAATTGAGCCTAATGATAACTATCTCGGTGGCAGGTGGAAATTAAAAGAGATCAACATCA ACAAGAAGTGCGCATATACTCTGATGCTGGAAGGATTCTACGTCCTCTTTTGGTAGTTCGTAATTTGCTCAAGATTAAAG GATCTAAGTCGGAACCTCAAACTTTCCAGTCCCTATTGGATAATGGTGTGATTGAACTGGTAGGACCAGAAGAAGAAGAG GACTGCTGCACTGCTTGGGGTGTTCAGAGTTTATTTGAAAAAGTGGGAAAATCCTCTGTAAAGTACACACATTGCGAACT TGACAAGTCATTCTTATTGGGTTTAGGCTGTTCACTTATTCCATTTCCAAATCATGACCATGCAAGGAGGGTACTCTACC AGTCTCAAAAACACTCTTCACAGGCTATTGGCTATTCCACAACAAACCCTGATATTAGAGTTGATACTTTATCTCATCAA TTGCATTATCCCCAAAAGCCACTTTTCCGAACAATGATATCTGACTGCCTGGGAAAACCACAGCCACTAGCTCAAAATCA AGTTCTTCCAAAGGCTGAGTTCTATAATGGGCAGAATGCAATTGTTGCTGTCAATGTACATATGGGATACAATCAGGAAG ATTCTCTGGTGATGAATCGTGCTTCTTTGCAGCGTGGTATGTTTAGATCTGAGCACGTACGGAGTTACAAATCTGAGATT GAAAATAAGGACTCTGCAGAGAAGAAACGGAAACCAGATGATATTGTCAATTTTGGGAAGGTTGAAAGTAAAATTGGCCG AGTCGATAGCCTTGATGATGATGGCTTTCCATATGTTGGTGCAAATTTGCAAAGTGGGGATATCATTATTGGGCGGGGTG CTGAGTCAGGAGCAGACCATAGTATTAAGTTAAAACACACTGAAAGGGGTTATGTTCAAAAGGTTGTCTTATCTTCCAAT GACGAGGGAAAGAATTTTGCCACAGTTTCATTAAGACAGGTAACTGGTGAAACCCAAAACTGCATTAACGAGGATGCGTG TTATTTTATGCACGAGTACTTCCATGCATCCATGTCGAAATGCACATATATAGATTAGTACATCATTTGAACATGGATGT GTTATGTTACTCTACTGAAAGCCAACCTTTCTAACTTCTAAATTGAATTTGATCACTGGTATAATTTGTTATTTAATTAC ACTGCAGGTTCGTAGTCCAGTTCTTGGAGACAAGTTCTCCAGCATGCATGGTCAAAAGGGTGTCTTAGGATTTCTGGAGT CTCAGGAAAATTTTCATTTCACAAGCCAAGGCATTGTTCCTGATATTGTCATTAATCCGCATGCATTTCCCTCACGACAA ACTCCTGGGCAACTCCTTGAAGCTGCTTTAGGAAAGGGGATTGCTGGTGCTTTAGAAAAGAGGTTTTCTCGTCGTGGATT ATTGAGACATGCTACCCCTTTCTCCACTCCCTCTGTCGAAGCCATTATGGACCAGCTTCACAGGTGCAGTTTAATCTTGT TATTCAGTTTACTTCAAATGCAGTTTGGCGTGTTGTATGTTATATGGGCCATTCACTAGAGGTAGAACTTGTATTTTATC TTCTGCTCTTGCTATGATGTTTACTATTTGCCAAAAATGTCTTCCACGCTGATGGTCTCTTGCATTTTTCTGGGGTCACT TTAAATTTAGGAATTACTTTCCTAGTTCCACTTTGAAGTTGTGTATTTTGTTTTGTTGTTTACTGAGCCTTGATTCACTT TGGTTTTTTGGTATATCACAGAGCTGGGTTTTCAAGGTCGGGAACTGAGAGGGTATATGATGGGAGGACTGGTGAGATGG TGCGTTCGCTCATATTTATGGGCCCCACCTTCTATCAGAGACTACACCACATGTCTGAGGACAAAGTAAAATTCAGGAAC ACTGGTCCGGTTCACCCGCTAACCCGACAGCCTGTTGCTGACCGGAAGCGATTTGGAGGTATCAAGTTTGGTGAAATGGA GCGTGATTGCCTCATAGCACATGGCGCATCAGCAAACCTGTATGAACGCCTCTTCACTCTGAGTGACTCGTCCCAGATAC ACATTTGCAGTAAATGCAAAAATGTTGCAAATGTGATCTTAAGGCCGGTGGCTGGTGGCCGTAAAATACGAGGTCCCTAT TGCCGCTTCTGTGAATCTGCTGATGACATTGTGGTAGCCAATGTCCCTTATGGAGCTAAGTTATTGAGCCAAGAGCTTTT TAGCATGGGCATTAATCTCAAATTTGAAACTGAACTTTGCTAGATGAGACAACAACTGTTTAACATGTAGCATTTCTAGC TCTTTCACCTAAAACTTGTGAACTCTGTGGTGTATATATCAGTTCGGTTCCTGGATGTTTGTTTACTTGAATGTTTATTT TGGAGTAGTGAATGACATGCACCCAGTTTAACTAATGCCTTCGCATTTCTTTTTTGTTGGTTGAAGATATTCGGTCAATG CTCATCATCATGAAGCTCCTTGACTTACCAGTTCACGAATGATGAGCAGTGAGCTCCAAGTACTACGCATTGAGTTATTC TTTTCTTCTCTCGTTTTTGGCTTTACATGTTTATTTGTTAGGTTTTGGTGAATTAATTTAACGAAACAACAAAAGCAGGA TTTTTGCATATTGGTTGTGTATAGCAGTCCCTAACTGCCAGAACTACCTTTGATATAAGCTGCTTTTTTACATGGTCAAT GTGCTGAAAAGGGGAGTTTTATGTTTTCC
CDS sequence (LotjaGi1g1v0377700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTCACATTGGTAGCAGCAAGGACGGCATTGGCATCAACCTCGACGACGACATCGTCGACGCCATGGACGTCGACGT CGACTTCGACCTCGACGACGACGACGAAGATTCCTCTTCCAACGCCGAGATTCTCAAGGAGCTAGGAGAAGACATGGTCA AGCATTTCTGCACCAAAGCTTCCAGAATGTTCTTCGACGAGCACGGCCTCGTCAGCCACCAGATAAACTCCTACAACCAG TTCATCGCCGCCGGTCTTCAAGCCGCGTTCGATGCCTTCGGCGACCTCAATGTCACGCCCAGCTACGATCCTTCCAAGAA GGGTGACAACGAGCATTTCAAATACGCCACCGTCAAGTTCGGGAAGGTAACGCTTGATCGGCCGAAGTTCTGGGGCGGCG CGGCGAATGCTCAGGAGTTTAAGATGCTTCCGAGACATGCACGCCTTCAGAGGATGACTTATGCTGCTAAAATGAAAGTC ACTGTTGAAGTTCAGGTGTTTACGCCGCATAAGGTTCGGAGTGATAAGTTTAAGACTGGGAAAGAAGATTACATTGACAG AGAGATTATAAAGGAAGATAAGAGAGAGATAATTATTGGGAGATTGCCTGTTATGGTTATGTCTGATCTGTGTTGGATGA AGGAAGCTGAAAAGGGTGATTGCGATTTTGATCACGGAGGCTATTTCTTGATTAAGGGTGCTGAGAAGGCCTTTGTTGCA CAGGAACAACTATTTCTTAAGAAGCTCTGGGTTTCAAATACTCCAGATTGGGCAATTGGGTACAAGTCGCTGAACAAGCG AAATCGGTTGATTCTGAAACTTGTTGGCAATTCCAAATTTGAAGAAATAAACAATGGGGAGAAGGTCCTGAGTGTTTATT TCTTGGGTGTGGAGGTTCCCGTATGGATACTGTTTTTCAGTCTTGGCGTCTCATCAGACAAAGAGATCATAGATCTCATT GATTATGGGAATGAAGATACCCAAATTCAGAATATCTTCTTTGGATCCATTCGTGATGCCGATGAGAAATGTTCTGGTTT TCGTAAAGGGAAGAACGCACTGCACTACATGGAGGAACATGTGAAAGGTATCCAGTATCCTCCTTCAGAGTCTATGGAGG AGTGCCTGAACTTGTACCTCTTTCCTGGCAGCAGCGGTTTGAATAGGAAGGCACGCTTCCTTGCGTATATGGTGAAGAGT CTGTTGCTTGCATATACGGGCCGCAGAAAATGCGATAACAGGGATGATTTCCGCAATAAGAGGTTTGAGTTGGCTGCTGA GCTGCTTGAGCGTGAGCTGAAAGTGCACTTTGCACACGCCCGAAAGCGAATGTCTAAGGCTTTGCAGAGAGATCTGAATG GAGATCGTGATGTGCGCCCAATTGAGCACTATCTCGATGCTTCAATTATTACCAATGGTCTCCAAAGGGCCTTTTCCACT GGAGCGTGGACTCATCCTTATAAAAGGTTAGAAAGGACCTCTGGTGTTGTTGCAAATCTTGGGCGAACTAATCCATTACA GACCATGGCTGAATTAAGAAGAACAAGGCAACAAGTTCAGTACACTGGAAAGGTTGGGGATGCTAGATACCCGCATCCTT CTCACTGGGGCAAGGTCTGTTTCCTCTCTACCCCGGATGGTGAAAATTGTGGACTAGTAAAAAATTTGTCTGTCACAGGA CTAGTGAGTACAAACATAAGTGAATCTATATTTCCTCAGTTGCTTGATTGTGGAATGGAAGAGCTTGTTGATGATACTAC CACTTTTCTGAGCAAAAAAGACAAAGTCTTCCTAAATGGGGATTGGGTTGGAGTTTGTCCAGATCCAATTTCATTTGTGG CAGGTCTACGGAGTAAAAGGCGTAGAAATGAATTGCCACACCAGGTGGAAATTAAAAGAGATCAACATCAACAAGAAGTG CGCATATACTCTGATGCTGGAAGGATTCTACGTCCTCTTTTGGTAGTTCGTAATTTGCTCAAGATTAAAGGATCTAAGTC GGAACCTCAAACTTTCCAGTCCCTATTGGATAATGGTGTGATTGAACTGGTAGGACCAGAAGAAGAAGAGGACTGCTGCA CTGCTTGGGGTGTTCAGAGTTTATTTGAAAAAGTGGGAAAATCCTCTGTAAAGTACACACATTGCGAACTTGACAAGTCA TTCTTATTGGGTTTAGGCTGTTCACTTATTCCATTTCCAAATCATGACCATGCAAGGAGGGTACTCTACCAGTCTCAAAA ACACTCTTCACAGGCTATTGGCTATTCCACAACAAACCCTGATATTAGAGTTGATACTTTATCTCATCAATTGCATTATC CCCAAAAGCCACTTTTCCGAACAATGATATCTGACTGCCTGGGAAAACCACAGCCACTAGCTCAAAATCAAGTTCTTCCA AAGGCTGAGTTCTATAATGGGCAGAATGCAATTGTTGCTGTCAATGTACATATGGGATACAATCAGGAAGATTCTCTGGT GATGAATCGTGCTTCTTTGCAGCGTGGTATGTTTAGATCTGAGCACGTACGGAGTTACAAATCTGAGATTGAAAATAAGG ACTCTGCAGAGAAGAAACGGAAACCAGATGATATTGTCAATTTTGGGAAGGTTGAAAGTAAAATTGGCCGAGTCGATAGC CTTGATGATGATGGCTTTCCATATGTTGGTGCAAATTTGCAAAGTGGGGATATCATTATTGGGCGGGGTGCTGAGTCAGG AGCAGACCATAGTATTAAGTTAAAACACACTGAAAGGGGTTATGTTCAAAAGGTTGTCTTATCTTCCAATGACGAGGGAA AGAATTTTGCCACAGTTTCATTAAGACAGGTTCGTAGTCCAGTTCTTGGAGACAAGTTCTCCAGCATGCATGGTCAAAAG GGTGTCTTAGGATTTCTGGAGTCTCAGGAAAATTTTCATTTCACAAGCCAAGGCATTGTTCCTGATATTGTCATTAATCC GCATGCATTTCCCTCACGACAAACTCCTGGGCAACTCCTTGAAGCTGCTTTAGGAAAGGGGATTGCTGGTGCTTTAGAAA AGAGGTTTTCTCGTCGTGGATTATTGAGACATGCTACCCCTTTCTCCACTCCCTCTGTCGAAGCCATTATGGACCAGCTT CACAGAGCTGGGTTTTCAAGGTCGGGAACTGAGAGGGTATATGATGGGAGGACTGGTGAGATGGTGCGTTCGCTCATATT TATGGGCCCCACCTTCTATCAGAGACTACACCACATGTCTGAGGACAAAGTAAAATTCAGGAACACTGGTCCGGTTCACC CGCTAACCCGACAGCCTGTTGCTGACCGGAAGCGATTTGGAGGTATCAAGTTTGGTGAAATGGAGCGTGATTGCCTCATA GCACATGGCGCATCAGCAAACCTGTATGAACGCCTCTTCACTCTGAGTGACTCGTCCCAGATACACATTTGCAGTAAATG CAAAAATGTTGCAAATGTGATCTTAAGGCCGGTGGCTGGTGGCCGTAAAATACGAGGTCCCTATTGCCGCTTCTGTGAAT CTGCTGATGACATTGTGGTAGCCAATGTCCCTTATGGAGCTAAGTTATTGAGCCAAGAGCTTTTTAGCATGGGCATTAAT CTCAAATTTGAAACTGAACTTTGCTAG
Protein sequence (LotjaGi1g1v0377700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGHIGSSKDGIGINLDDDIVDAMDVDVDFDLDDDDEDSSSNAEILKELGEDMVKHFCTKASRMFFDEHGLVSHQINSYNQ FIAAGLQAAFDAFGDLNVTPSYDPSKKGDNEHFKYATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKV TVEVQVFTPHKVRSDKFKTGKEDYIDREIIKEDKREIIIGRLPVMVMSDLCWMKEAEKGDCDFDHGGYFLIKGAEKAFVA QEQLFLKKLWVSNTPDWAIGYKSLNKRNRLILKLVGNSKFEEINNGEKVLSVYFLGVEVPVWILFFSLGVSSDKEIIDLI DYGNEDTQIQNIFFGSIRDADEKCSGFRKGKNALHYMEEHVKGIQYPPSESMEECLNLYLFPGSSGLNRKARFLAYMVKS LLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFST GAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTG LVSTNISESIFPQLLDCGMEELVDDTTTFLSKKDKVFLNGDWVGVCPDPISFVAGLRSKRRRNELPHQVEIKRDQHQQEV RIYSDAGRILRPLLVVRNLLKIKGSKSEPQTFQSLLDNGVIELVGPEEEEDCCTAWGVQSLFEKVGKSSVKYTHCELDKS FLLGLGCSLIPFPNHDHARRVLYQSQKHSSQAIGYSTTNPDIRVDTLSHQLHYPQKPLFRTMISDCLGKPQPLAQNQVLP KAEFYNGQNAIVAVNVHMGYNQEDSLVMNRASLQRGMFRSEHVRSYKSEIENKDSAEKKRKPDDIVNFGKVESKIGRVDS LDDDGFPYVGANLQSGDIIIGRGAESGADHSIKLKHTERGYVQKVVLSSNDEGKNFATVSLRQVRSPVLGDKFSSMHGQK GVLGFLESQENFHFTSQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIAGALEKRFSRRGLLRHATPFSTPSVEAIMDQL HRAGFSRSGTERVYDGRTGEMVRSLIFMGPTFYQRLHHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLI AHGASANLYERLFTLSDSSQIHICSKCKNVANVILRPVAGGRKIRGPYCRFCESADDIVVANVPYGAKLLSQELFSMGIN LKFETELC
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 37 | 1208 | 1172 | 0.0 | ||
| PANTHER | 37 | 1208 | 1172 | 0.0 | – | |
| SUPERFAMILY | 52 | 1206 | 1155 | 1.43E-298 | – | |
| Gene3D | 62 | 244 | 183 | 4.2E-7 | – | |
| Pfam | 69 | 460 | 392 | 4.4E-30 | ||
| CDD | 70 | 1204 | 1135 | 0.0 | ||
| Gene3D | 258 | 411 | 154 | 6.2E-19 | ||
| Pfam | 294 | 421 | 128 | 4.4E-13 | ||
| Gene3D | 412 | 594 | 183 | 3.4E-27 | – | |
| Pfam | 500 | 559 | 60 | 6.8E-16 | ||
| Pfam | 596 | 656 | 61 | 6.2E-21 | ||
| Pfam | 672 | 718 | 47 | 1.9E-7 | ||
| Gene3D | 727 | 1091 | 365 | 7.0E-124 | ||
| Pfam | 728 | 1105 | 378 | 6.7E-97 | ||
| Gene3D | 758 | 946 | 189 | 7.0E-124 | ||
| ProSitePatterns | 950 | 962 | 13 | - | ||
| Gene3D | 1092 | 1206 | 115 | 3.4E-38 | – | |
| Pfam | 1107 | 1205 | 99 | 3.2E-29 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). | ||
| Molecular function | DNA-directed 5'-3' RNA polymerase activity | Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo'. | ||
| Biological process | Transcription, DNA-templated | The cellular synthesis of RNA on a template of DNA. | ||
| Molecular function | Ribonucleoside binding | Interacting selectively and non-covalently with a ribonucleoside, a compound consisting of a purine or pyrimidine nitrogenous base linked to ribose. |
Expression pattern of LotjaGi1g1v0377700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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