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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR007699
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

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Download the entire search result as a CSV file.

We have found 7 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 8.548s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj2g3v2061250.1
n.a. PREDICTED: protein SGT1 homolog [Cicer arietinum] gi|502159855|ref|XP_004511553.1| chr2 31129652 31133792 +
3 domain predictions
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Lj2g3v2061250.2
n.a. PREDICTED: protein SGT1 homolog [Cicer arietinum] gi|502159855|ref|XP_004511553.1| chr2 31129652 31133792 +
3 domain predictions
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Lj4g3v0644110.1
n.a. Calcyclin-binding protein [Medicago truncatula] gi|357475237|ref|XP_003607904.1| chr4 10408049 10410179 +
2 domain predictions
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LotjaGi2g1v0138700.1
n.a. Protein SGT1; TAIR: AT4G11260.1 phosphatase-like protein; Swiss-Prot: sp|Q9SUT5|SGT1B_ARATH Protein SGT1 homolog B; TrEMBL-Plants: tr|I3SS23|I3SS23_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0138700 LjG1.1_chr2 50696533 50703317 +
3 domain predictions
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LotjaGi2g1v0436700.1
n.a. SGT1; TAIR: AT4G11260.1 phosphatase-like protein; Swiss-Prot: sp|Q9SUT5|SGT1B_ARATH Protein SGT1 homolog B; TrEMBL-Plants: tr|A0A1J7H3E0|A0A1J7H3E0_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0436700 LjG1.1_chr2 93318002 93322839 +
3 domain predictions
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LotjaGi2g1v0436700.2
n.a. SGT1; TAIR: AT4G11260.1 phosphatase-like protein; Swiss-Prot: sp|Q9SUT5|SGT1B_ARATH Protein SGT1 homolog B; TrEMBL-Plants: tr|A0A1J7H3E0|A0A1J7H3E0_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0436700 LjG1.1_chr2 93318002 93322839 +
3 domain predictions
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LotjaGi4g1v0082300.1
n.a. Calcyclin-binding protein; TAIR: AT1G30070.1 SGS domain-containing protein; Swiss-Prot: sp|Q9CXW3|CYBP_MOUSE Calcyclin-binding protein; TrEMBL-Plants: tr|I3SHE7|I3SHE7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0082300 LjG1.1_chr4 10766426 10769241 +
2 domain predictions
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