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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0436700 |
| Transcript ID | LotjaGi2g1v0436700.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | SGT1; TAIR: AT4G11260.1 phosphatase-like protein; Swiss-Prot: sp|Q9SUT5|SGT1B_ARATH Protein SGT1 homolog B; TrEMBL-Plants: tr|A0A1J7H3E0|A0A1J7H3E0_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0436700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:93318002..93322839) extracted from Lotus japonicus Gifu genome v1.2.
GTGTAGGCACATGAATGGTAAAGATAAAATATAAATATAGATAGATAGATATTCATATAGGGGAATCGGGATTCGGAAAA GAAAAGGGGAAGAAGATAGAAGGGTTTGTGTTTTTGGGTATATGCAAAGAGTCACGATTAGGGAAACAAAAACGAAGGAT CTAGAACCCAAACCTCAAACCTTCAAAACTGATTTAAGAATAATCGATTCGTCTAAGGAAACAAACACGTCAACGACAAC ACAACACCACAGCGAAGAATAATGGCGGCGGCGGCGGAGACGACAACCACGGTGAAGGATTTGGAGAAGAAAGCCAAAGA AGCTTTCATTGACGACGACTTCTCCCTCGCCGTCGATCTCTACACTGAAGCCATCAACCTGGATCCAATCAACGCCAACC TCTTCGCCGACAGAGCACAAGCGCATCTCAAGCTCAACGCCTTCACTGAAGCGGTTTCCGATGCCAACAAAGCCATCCAG TTAGACCCTTCTCTGCCAAAGGCCTATCTCCGTAAAGGGTATTCTTCTTACATGTAATGTTTTGTTGTTGTTTTCTTCAA CCCTTGAATTGAATTGAATTGATGTGTGTGATACTGTTTTCTACAGGACTGCTTGTATTAAGCTTGAAGAGTACCACACT GCCAAGGTTGCACTGGAGAAGGGTGCCTCTTTTGCACCGGATGATTCCAGATTCACCAACTTGATTCAGCAATGTGACCG CTACATTGCAGGTGTGTGTGCATAACTCTTATTAACAATTGTCTTTGGTGGTTTTGAAAGTTGCAAGTGTATGCTAGTGT CCTTTGACTAATGAATGAATTGGATTTTTCAGTTAGATATTAGATTAGATGGTGAAGTAATCATCACACTTTGAAATTCA CTTGTTAGAATACACTAACTTGCTAATGCTATCTGATATTGCAAGTTGTAACGGACGGAACTACATAGTTCCAAAAGTCG GCTGTAAGAGAAATAACGGACGGAACTACATACTAATGTTGTATTTGCCCCCTTTAAATTTTGATACTACCTTTTCTAAT TAGCCTTGCTGCAAATATTTTGTTGACATGGGTTTCTTGCTAGCATTCGTGGTTGGTAATTGTTAAATGATGCCTGCTTT CTCTGTGAATGCTTTCTTGTTGGTTTCTCTTTTGCAAATCTTGTGTATTAGCATTTGTGGTTGTCATCTTTCCTTATGGT CTCGACACAGAGCTAGAGGAATCAGATGGGGCAGTCTCCCCTAGAGAAAAACCTTCCTTATTTATGTACAAATGTTGTCT TTGCCGCCCTTAAAAATTTTATACTACCTTTTCTAATTAGCCTTGCTGCAGATATTTTGTTAACATGGGTTTCTTGTTAG CATTCGTGGTTGGTGAATTTTTGTTAGGGAAATACTTTTAATTATGGATAGTGCCGTAATGAAAGAAGACACATGACATG TCACTGTGGCTCTTAAATAAACCCATACCATATTTATTGTTCGCGCGCAATAGTGGTGCTATAGCGCGTCGCGTAGCAGA CCCCTGCCGCGACAGGATCGCGGCCGCAAAATCCTGCTATTAGCGGCCAGTAGCGGCCTTCCCATGAATGGGATTTCATT TTTGGGGGTCATCCGCGACAGGCCGCGAGCCGTGATTGACTACACCTTGACCCATTGCATATAAGAAAGACATGTATCAA TTCTTGCGTTTGGTCCAGATTCCTCTCTAACAATAGCACAGCTGTTTTTGTAATTGATAAATGATGCCTGCTTGCGTATG CTTTCTTGTCAATTTCTCTTTTGCAAATCTTGTGTTTCAGGCCTTTAGCATTTCTGGTTGTCTTAATTCCTCTTGGTCTA TTGACACGTATATGATATTGTGTCTGATGTCTTTTATCTTGTTAGAAGAATCCAATGCTCTTACTAGCACCTTATCGACA ACTGCGCCCTTAATATCTGTACCGTCTGGTGATGATCCCCGTTCAGCTGTTAGTGATGGGACAAATAAAGAAGCTGAAAC AGATAGTTCTTTATCACAAATCAATGAAGTTGCACCCAGCAAACCAAAATACAGGTTGGCACTTTTTTTGCTTCTGCCCA TGCTGCTATTTCCTTTACTCGTTATATTTTTTGGATAAGAAAGTTTGGTCGTTGCAATGATTGCCATGTTTTAATCCATA TTATCAATTCCTTAGTCATAATTCTCCATGTTTGGCTTAAGCTCATTTTGGGGTTTTAGTTAAAAGCGTCTTGGGAGAGA TTTTGAAACCACCCCCCCCTTTTAAAAAAAAATTATTTAATTTGCACACTTTGTTTATGCTGGTTGGGACTGGGAACGTT AAAATTTCACCAAACTGTGGTTTTTGAGCATGTGTGTTTTCTCTTGTATTTTGGTATGTTTCTTTGAATGCATGTTGATA TTATGGGCTTAACGATCTTGTTACCTGTTGATTGATGCATGGGCAGATATGAATACTACCAGAAGCCCGAAGAAGTGGTT GTGACAATATTTGCAAAAGGAATACCAGCAGAAAGCGTGGTCATTGACTTTGGTGAACAAATTGTATGTTTATGTAATAT AATGGATAATTGATGCTTTGTTTTTACTCTCTTGATTTCCTCACGTTTCATGTAAATAACTCACCGAATGTTTCTAGAAA TAGTTAACTTAACTTGAAGTTCTTTAACTTTGCAGCTGAGTGTTACTATTGATGTTCCTGGCCAAGATGCTTATCATTAT CAACCTCGATTGTTTGGAAAGGTGACTGATTACTATCTTCTTGAATATTGCACGCAATAGACATAGTTTTCTGACAATGA ACCATTTTTTTAACTCCGCCGCACTCATAGAACTTGTTTAATGAAAAATTAACTAATTAAGTAAATTTATCTTGCTGACA TTAACAAACCATTTCAAGGACTTGTTATTTTGATGAACTACTTTATTTTATGTAAGTTTTCATATATGAGTATGACTATA ATTTCATGATGAAGTGTTTGGGATATGAGCTGGTTCTATTTTAATATCAGTTTTAGTGTGACTATCAGGTGATTTTCAGG ATAGAGATACTTTATTTTACTTTTTCAATATGTAAACAACTTATGTATTGCTTCGATAACATAAACTTTCATTAACTTAA CCTGTTCTTTCTATTTGGGCAAAACAGGTAATACCTGATAAGTGCAAATTTGTGGTTTTGTCAACCAAAATTGAAATACG TCTTGCAAAAGCTGAAGCTATTAATTGGACATCTCTCGAATATAGCAAGGATATGCCTCCCCAAAAAATTAAAGTGCCTA CAAGTGAGCTGACTACTATATTGTTTATCCTTTGTCCACTCTTTGATTATTTGGTTCGATTTGTTATGATTTTTTAATTG GTAATTGTTAAATAAGAAGGAAACATATCATGCTATTACTTTTCTGGTGGTAAACTTACTTCCAATGTGAATTTTGCAGT TCAATCTGAAAGGCCTGCATACCCATCATCAAAGCCAAGGACAAAAGATTGGGATAAGTTGGAAGCTATGGTGAAAAAAG AGGTTTTGCAGCTATACCCTACTACTTTGCTAATGAACAACCTTATTTCATAAAAGCTCCATTTTAAGTAGTTTCAATTT TTACAGGTTTGTCCTTATGGTTTAAAAGTGCAATTATGTCAGCAAAATTAGTTAACTTCTCAATCTCTCTGTTGCATTTG ATTTGAAAACTGAAGGATATTGTTAAAATTAGAAATTGGGCGAAAAGTTTGCTAAAAGATAAACCTCCTATTTAATGTTT TTCCCAACAAAATTAGTACAGTATATTCATGAATTAATTCGGTTGTTAACTTGATCATCTTATTACTTTATAAATAATAT TTTACCTAATGGTGGTTATCTTTCAGGAGAAAGAAGAAAAGCTGGATGGTGATGCTGCTTTGAATAAATTGTTCCGTGAT ATTTATCAAAATGCTGATGAGGACATGCGGAGAGCAATGAGCAAGTCATTTGTGAGAAAACCATTCTGTGCTTGCTTTAA AATTCATGAACATTGGTTCCTACGATATTGTGCTTCGTTTTCTTCTAAAATTATTTACATTTATTATTCCTTTGCCTTCT TCATTAACTATGCTTCTTTGCAGCTGGAGTCAAATGGAACAGTGCTGTCAACGGATTGGAAAGAAGTGGGATCCAAGAAG GTGGAAGGAAGTCCTCCAGAAGGTATGGAATTGAAGAAATGGGAGTACTAATTCAGTACAAGCTGATGCTCATGAGAGTT CAAATTCACAAAAATAAATTCTGAGAAGGGAAACAAATTCTGTAATCTTAATGTTATCGGTTATTTTGTGAATGATAAAT TGCATTGTGGGGAAAATGACCTAACTTTCATCTTGCTGCGGGATTGGATTTTATTTCGTTGGTGATGTAAATTAATGTTA AACTTAAGTTATGGAAGTTGGTTTTTTGGTTTTACGTTTTGGAGTTTTATTTTTTGTTAATTATATATTGGAAATAATGA GTAGGACTGCCAGCATTTCGAGCCTGTTTATTTAGCCCTTCAGGCTCCAACGCATGTTTTTTCTGCATTGGCAAATTGGA GTGTCCGCATAAACGTGTGCCTAGCTGCTTGGAAACTTTAATCCAAATGGGCTTTAAAGTGTAATGGTTCTCACTTCTCA CGGTTATAGCAATTAGAGAGACATGAGTATGGATATATTTTTTATAATCACGTTGGTCGGACATGATTATGGATATATTC TTTATAATCATGTTGGTCGGATGAGGAGTTTACCGCAATAGCTTTCATCCAAAATCTCGAGGTTAATAATGTATGTGTCC TTTTACTTATATATACTATTCAACATCTATCTCCTTTA
CDS sequence (LotjaGi2g1v0436700.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGGCGGCGGCGGAGACGACAACCACGGTGAAGGATTTGGAGAAGAAAGCCAAAGAAGCTTTCATTGACGACGACTT CTCCCTCGCCGTCGATCTCTACACTGAAGCCATCAACCTGGATCCAATCAACGCCAACCTCTTCGCCGACAGAGCACAAG CGCATCTCAAGCTCAACGCCTTCACTGAAGCGGTTTCCGATGCCAACAAAGCCATCCAGTTAGACCCTTCTCTGCCAAAG GCCTATCTCCGTAAAGGGACTGCTTGTATTAAGCTTGAAGAGTACCACACTGCCAAGGTTGCACTGGAGAAGGGTGCCTC TTTTGCACCGGATGATTCCAGATTCACCAACTTGATTCAGCAATGTGACCGCTACATTGCAGAAGAATCCAATGCTCTTA CTAGCACCTTATCGACAACTGCGCCCTTAATATCTGTACCGTCTGGTGATGATCCCCGTTCAGCTGTTAGTGATGGGACA AATAAAGAAGCTGAAACAGATAGTTCTTTATCACAAATCAATGAAGTTGCACCCAGCAAACCAAAATACAGATATGAATA CTACCAGAAGCCCGAAGAAGTGGTTGTGACAATATTTGCAAAAGGAATACCAGCAGAAAGCGTGGTCATTGACTTTGGTG AACAAATTCTGAGTGTTACTATTGATGTTCCTGGCCAAGATGCTTATCATTATCAACCTCGATTGTTTGGAAAGGTAATA CCTGATAAGTGCAAATTTGTGGTTTTGTCAACCAAAATTGAAATACGTCTTGCAAAAGCTGAAGCTATTAATTGGACATC TCTCGAATATAGCAAGGATATGCCTCCCCAAAAAATTAAAGTGCCTACAATTCAATCTGAAAGGCCTGCATACCCATCAT CAAAGCCAAGGACAAAAGATTGGGATAAGTTGGAAGCTATGGTGAAAAAAGAGGAGAAAGAAGAAAAGCTGGATGGTGAT GCTGCTTTGAATAAATTGTTCCGTGATATTTATCAAAATGCTGATGAGGACATGCGGAGAGCAATGAGCAAGTCATTTCT GGAGTCAAATGGAACAGTGCTGTCAACGGATTGGAAAGAAGTGGGATCCAAGAAGGTGGAAGGAAGTCCTCCAGAAGGTA TGGAATTGAAGAAATGGGAGTACTAA
Protein sequence (LotjaGi2g1v0436700.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAAAAETTTTVKDLEKKAKEAFIDDDFSLAVDLYTEAINLDPINANLFADRAQAHLKLNAFTEAVSDANKAIQLDPSLPK AYLRKGTACIKLEEYHTAKVALEKGASFAPDDSRFTNLIQQCDRYIAEESNALTSTLSTTAPLISVPSGDDPRSAVSDGT NKEAETDSSLSQINEVAPSKPKYRYEYYQKPEEVVVTIFAKGIPAESVVIDFGEQILSVTIDVPGQDAYHYQPRLFGKVI PDKCKFVVLSTKIEIRLAKAEAINWTSLEYSKDMPPQKIKVPTIQSERPAYPSSKPRTKDWDKLEAMVKKEEKEEKLDGD AALNKLFRDIYQNADEDMRRAMSKSFLESNGTVLSTDWKEVGSKKVEGSPPEGMELKKWEY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 2 | 142 | 141 | 9.1E-31 | ||
| ProSiteProfiles | 11 | 44 | 34 | 6.962 | ||
| ProSiteProfiles | 11 | 112 | 102 | 18.827 | ||
| SMART | 11 | 44 | 34 | 15.0 | ||
| SUPERFAMILY | 12 | 122 | 111 | 8.23E-27 | ||
| PANTHER | 12 | 381 | 370 | 2.5E-191 | – | |
| PANTHER | 12 | 381 | 370 | 2.5E-191 | – | |
| SMART | 45 | 78 | 34 | 0.011 | ||
| ProSiteProfiles | 45 | 78 | 34 | 9.027 | ||
| Pfam | 48 | 77 | 30 | 0.037 | ||
| ProSiteProfiles | 79 | 112 | 34 | 7.198 | ||
| SMART | 79 | 112 | 34 | 0.19 | ||
| Pfam | 80 | 112 | 33 | 0.01 | ||
| MobiDBLite | 143 | 173 | 31 | - | – | |
| MobiDBLite | 159 | 173 | 15 | - | – | |
| SUPERFAMILY | 176 | 275 | 100 | 2.54E-33 | ||
| Gene3D | 176 | 286 | 111 | 1.1E-28 | ||
| ProSiteProfiles | 180 | 269 | 90 | 15.562 | ||
| Pfam | 184 | 259 | 76 | 1.2E-15 | ||
| CDD | 186 | 269 | 84 | 1.59667E-31 | – | |
| ProSiteProfiles | 290 | 381 | 92 | 36.311 | ||
| Pfam | 299 | 379 | 81 | 3.3E-35 | ||
| MobiDBLite | 361 | 381 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi2g1v0436700.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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