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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0138700 |
| Transcript ID | LotjaGi2g1v0138700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein SGT1; TAIR: AT4G11260.1 phosphatase-like protein; Swiss-Prot: sp|Q9SUT5|SGT1B_ARATH Protein SGT1 homolog B; TrEMBL-Plants: tr|I3SS23|I3SS23_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0138700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:50696533..50703317) extracted from Lotus japonicus Gifu genome v1.2.
CAATCCTTCATCATGATAAAAAAAAGATTTGTTTAATAATTTCCTCTTTTTCTTATATATATATATATATATATATATAT TTTGGGAGACTTGTGAAAGTCTACTCTAAAGTCCCTTCCTTCCCCTTTCCCCTTATTGCTTGCGCGTTCACCTTCGCTCT ATATACCAATCTCTCTCTGGTCAATCAAACGCATTCGTCTTCTCTCTCTCTCTTTGTCTCCTTTCTCTGTTCATCTTTCT CCCATGGCTTCCGATCTCGAAGCCAAAGCCAAAGAGGCCTTCGTGGAAGACCACTTTGAACTAGCGGTGGAGCTTCTCAC TCAGGCCATTGATGTCGACCCCAAGCATGCCGAACTCTATGCAGACCGTGCCCAGGCGAACATCAAACTCATCAACTTCA CCGGTATCTTCACCCTTTTTTCCCTTCTCATGCTTTTCTTGTTTTTCTTGAAAAGTTTGGGGTTTTTTGGATACCCTTTT GCTTGTTTTGTATGAATAACCACGCCTTTGTGAGAAACTGAAACTGTATTCAATTGGGTCTGTTGTTCTGGTTATGGATT CTTGTAGGAGCATGTGAATTCAACCAAGATAGGGTTTTTGCTTTTGAATTTGTTTAGTGTCTTCACTTTTAATATTCTTG AAAAAAAAATGTCATTGTGAAATTGGCATGTCTTGGTAACCAAGTTTGATACTCTCGTTTGCATGGACTTCCCTCGCATG TTTTGTACCGATTTTGTATCTCGAATATGCGCTTTCAAAGTGAGAGCTATTCGGCGTGGCATGGTTACCCTTACCAATGT ACTGATATTCAGTTTAACTAGTGCGTGTACCAATGAGCTTTTAAATAGAATAGAATGTATGATATATCTACGAGAAGGAT TTCAATTTAAGATTATGTGTAATTAAACTATGAGTAATATTCTTGTATACACTTCAATGATCAAATATAACAATAAAGTT GTGTAATGAACCAAAATATGATCAATTAAATGGTGAAATTAGGAGTTCTTGTGTTCTAAGCATTCTAGTAATTGGATAAA AAACATCCTTGTGAGTGAAAGGATTGTGAAAACCAATCATGTGAGAGCATGAGATAAATAGAGTTATGATAATGGTCATC TATATTCATAGAATGCTATTGTTTGCTTTGCTTGTTTATTCCTTTAGTTGGGTTTAGAACATGATTCCTTGCTCATTCTG TGTTTCCCCTTAGTTACAAATGTTTGTTAATGTAACTTTCCTGTGTACTTTGGATTTACCTGTTATTTGGGGTGTATAAC TTAGCTGCAGATGATTTGTAATGATTTTCTAATTCTGGGAATCAAATTTCTTGCTTATTCTCTAGAGGCTATTGCTGATG CAAACAAAGCAATTGAGTTGAATCCTTCTCTATCAAAGGCATATTTGCGCAAAGGGTAAGTACAAAATCACCTTATCTTT GCCTTTTCTTATTCTTATATGTTTGGTAATTGTCACTACACACGTTGAACTTTTTAAATATAATATCCTGAAATGTTGTC TTTTCGAATCAATGTCAAAAGCAGCCACTAAGCTGCCTAGGCATCGATGTAGGCTTGAATCAACGTGGCCTGTGTAACAT GTGATGTGGGTGAGAATGTAATCAAAAGCGCTTTTTATTTACTTGTAGAGTCCATGATCTTTTGATTTTCACACTAATGC CCAATCCCACATACGCCTAAAATCCTTGTATTGTGTGATCAATAAAGGATTGTTGAGGAAACATGCAAACATGAGGGGTC TGTGCGCACAGACATATATGTTCAAATATAACTTTGTATTTTAGGTAGGATCTTTCTGTCCATGTTAAAATCCCAAATTT ATGTCGTTTTTCCCCTCCCCCTCCTCTTCCAGTCCTAGGTATGATATCCATTGTGCAACCTTGGTGGCAGATTCAGCTGC ATCATACAAATTCAGAAGTCTTAACCAATTTATCTCACTTTATACACTCAATAGACAACCTTTACCTAATCTAAAGGGCT ATTCTAAACAGATGGATATCTTTGCATAATGGATATCTTTTCCACCGCCCCTCCTCTTCCAGTCCTAGGTATGATATCCA TTGTGCAAAGATATCCATCTACAATATGAGCACAACCACTGATGATTCACCTTAAATGTTGTCAATTCCATTCATATCTC ATGTAGTAGAACTCTTTAGTGTTTAATATTAAAATATAATTACGAAAATCTAATGTAACAGATACTGCAATCTAATTGAA TTTGATACTGGCTTATCATTATTTTATCTAAATATTGAGTGTTGCAAGGATATCTTGCTAAAGATGATTGATTTGTTGTG AAGTGCATCTGATATTGTATGTAATATTTTCATATGATTTACCCGTTTAATGGTGCTAATTACTAAATTTCTTGACTTAA TCTTTGATTTGTTACTTTGGCTGCAGTACTGCATGCATGAAACTTGAGGAATACCAGACTGCTAAGACTGCTCTGGAGAT GGGTGCTACATTGTCTACAGACAAATCAAGATTTCTAAATTTGATCAAAGAATGTGATAAACTCATTGCAGGTAACTTTG TTCTTTTTGTGGTAAAATTAATCCTATTGGGTGAAAAATTTATCATTTATTTATTTGTTTTTTTGTTTACTTTTGGTGTT CTAGACTTTTAGTTATATGTTACTGATGATTGTGTCTTGACTGTTGAAAGGAAAATTTGGATATGTCATTTTGGCTTGGA AACTGACATGAGCTTGATATTTTGTTGAACAGAAGAATCTTATCCGATGCCTATACAGGAAAAGGCCACAACACTGGATG CATCTCCAAAAGATGTTCAGCCGGATAAAGATCTTACAGAGCAGCCAATAGTAGCAGTGGCTAAACCTAAATATAGGTCA GTATAGCTTTCTGATTATTTATGTCCTTTGCTAGGGTTATGATAAGTACCAGCAATGAAGAAGGAAGAAAAATTGTACCT TAAGAATGCTCTGATAACTATATTGAATTCCTGGAATTTCGAGAGATCCAAGGATCTTACAGTGATCCCCAGAGATGCTA ATCTTCTCTAACTCTCTTATTTGTAGCAATTGCTCTCTCACTCTCCAACTAACTCCCCACTAATTGACTAAAGCACTAAC TAGTTATGAGTACCTATCAATACTTCTTCCCTTGTTCCTTGACATCAATTTTCCAAATTTACACAAAAGGGGCACACCAT TAAAAAAAAAATATGGGACACCATAACAGAGGTCACAGTGTTTTGCTTGCAGCTAAGCTTAACGAAATATGAGTCTAACC CATTGGGGTAATTTTGATCCAGTGTCTGAAATTTGTGAAACTCGTTCCTTGACTGCCTTTCTTCTCCCTTCCACGTGTAT TACCACTGAGGCCACAACCCTTCCGTTACCCCATGAGTTGGGTCAAAAGGTTTCGGTGGGGGCTGCTAGGTCAAGCTTGC ATGAGTCATACTCTTGCTCCTGATGTAGCGTAAGACACTGCTTTGTTCTTTATAATATGACGTCGAGGACCCCCAGCTAT CTTCTGACGTGTGTCCACCACTGGTGTGGCATTGACCATTTTACCTGCTCTGCTGTCTGCCAGTCTTGGTGTTGGATGTT TGACTAACCCCATCTTCCCCTCGGCCAATAAGATAACTTTAGCCGCTGTTTGAGCATCCTGTCTAGCTATTTTTGAGGTG GTCGTTCGGCCATAAGTCTTGCATCCTCTCGTTCCTCTTGTCCTCATGAGAGTTATGTTTATGGCAACCTGCTTCATGGA TGTCCCATGCTTCTTTTAAACAGTGCACAGGGCTGGTCTACGTTATGCCTAATTCAACTTTAAATTTAAAAATGGGAGTT ACACTAGGGAAAAGAGGGCAGTTAAGGAAAACCCATAGGTGGCTGATGTGGAGCAGTTACCAAGAGAGAGAAAGAGTGGG AGTGGGAGAGAGTGGGTTATAGAGCGTCAAGGGTAGCAGTGGGAGGCACGGAAGTTATTCTTTTGACACCGTGCAGCCAT AGGTGCTTGGGCTCTCAATTTCAGAAATTGAGAATTTCTGTTTTACTGTATCATATTTCTATTGTACTGTTTCAGAATTC CATTGTTCCCAAAGAATTGTCACTTAATCAAGTTGGCTCTAATACAGGTGAATCTCCAAAGTACAAAATGTTGGGTGAAT GAAAATGAATGGTTTTATATATTGCATCTTTTTTTTTTGGTTGATTCATCTGTATCACATCTCTTCATGCAAAGGGGCCT TTGGGCTTGATGCATCAGTAAGAAGGCCTGCTACTTCATGCTGAAAATAAACTTTGAATTAAAATATTGGGGGCAGCAAA AATCAAATTTTAAACCACTTGGTCAAGGATGTTAGCTCTAATGTCATGTCATATTTTGTTATTTGACATGTCATGGATGG TTTATTTCTATGTATGGGCTTCTAGAAAATAATCCCTCATCACTTGAGTGTTTACAATTTTTCAGTATCTGATGAGCAGA ACTTATAAATAAGTCGTCTGTAATATTTCTTCTATTATTTGCGTACGATCTTTTGTGCTCTATGTGCATTAACAAATTTC TTTTAATGGAAGATGTTAACTTTGAAAAAATAATAATTATGCAGGCATGAATTCTACCAGAAACCGGATGAAGTGGTTGT AACCATATTTGCAAAGGGCGTATCAAAGGAAAGCATTACTGTTGATTTTGGTGAACAAATAGTATGGCTCTTATTTAATT AGTCAACGTTTCTTATGCTATTTTTTATTACAATTCCATGCATCTTGGTGGAACAAGTTGGTATACCACATTCTAAGCTT ACTCCCTTTTTTCCTGATTTGTAGTTAAGTGTTAGCATTAATGTCCCTGGAGAAGATGCATATACTTTTCAGCCTCGCTT ATTTGGAAAGGTATCAATAAGAGCTTTTGTCTCTTTGTATAATATGCTTTTGGATCACTGGGGAAAATGTAGCTTACATG GGTTTATATCATAAGTTTTGTAATGGTTATACTGTGGATACTGGACATGATTATAATTTTGGTTATCTCATATTTTGTTT TATTTTATCTCATTATAATGTAAAGTTGGTATGATATCTTTAATATGTGGATCAAATATGCATATACTTTTCAACCTCGC TTATTTGGGAAGGTATCAGTAGCCAATGTGAACCTTTGTCTCTTAGTATAAAATGCTTGGATCACTGGGGTAAATGTAGC TTGTATGGGTTTATATCATAATTTTTGTTATGGTTATACTGTGGATACTGGACATGGTTATAATTTTGGTTATCTGATTT TATTTTATGTTATCTCATATTATAACATAAAGTTGGTTGTATCCTTAATATGAAAATGATTCACATAGCCGACCTCACTT ATTGTGATAAGGCTTTTGTTCTTGTATTTGTGTTTTGGTCTCAAGCTTTTATGTTGGCATATTCACATTTCAACTCCTCT ATATGATTATCTTAGCATTGTTTTGTCATTCTGTCTATTATGTTAATTTTTTGTTATCTTCAATCAGATCATATCTTCCA GATGCCGGTATGAAGTTTTGTCCACCAAAATTGAAATTCGCCTAGGGAAAGCAGAACCTATTCACTGGAATTCACTAGAA TTCACCAGAGAGGTTGCAGTTGCACAGAGGGCTAATATTTCTTCTGGTAATTTCAGCTTTATCATCTGCAGTTTACCTTC CTTCCTGCATTGATTTAACATGATCCCTTTATTTCATATTAAGTGGAATAGCAGATTGCTGAGTAGCTGTCATACCAAAG ATGCAACGTAAATAAACTTGTAATACACATATAATGATAACTAGTACAGATTATTCGAATTTACAGACAATATTATTAGT AATCTCAAGTATGAACTAACAAAAATTTCGCAGTTGTTGGATGCACTTGCTGTTTGGACCCTAATTATCTTCATATCCAC ACCCACTACCTAATTTTTATCATGATTTATATCTTACTCTTATCCCTTGCTGCCACAAATTTCGCAGTTATTGGAAGTCA AAGACCTACTTACCCATCCTCAAAACCAAAAAAAGATTGGGATAAGCTTGAAGCGCAAGTTAAAAAAGAGGTTTGTCTAC TTCCTATAAGAAGTTTTAATCCTTTGTTTTTCAGCTCACTTCGTCCTCCTGACATTTTTCATTTCAGGAGAAGGACGAAA AACTTGATGGTGATGCAGCGCTCAACAAATTTTTCCGGGAAATATATCAAGATGCAGATGAGGATACAAGAAGGGCAATG AAAAAGTCATTTGTAAGTTTTATATATTTTCTATCTAGGATCATGGTTAGAGACTTAGAGTATTATGATGCCACTTGTTT ATTCATCTTTATTTGGCATCCTTTTGATATTTCAATTTTGTTGCAGGTGGAGTCTAATGGAACAGTACTGTCAACAAACT GGAAAGAAGTGGGAACAAAGAAGGTAGAGGGAAGTCCTCCTGATGGCATGGAATTGAGGAAATGGGAATATTAATATACT TTTCAAATCAATGTCAATATATCATCATATATATTTTGGTGTGGATCTTTGGATGCTTCATTTTGGTTAGATAACTGTTG AACAAATAGGAATACCTACTTTAACTGCTAAGACCTTACTTTTCTTGACTGAAGTTTGTTTGTCATTGGTGAATATAATA ATGCATGCTCTGTTTTGATTTTCCTTCTTTTAAGCCCTGCTTTCTACTATCCAGCTGAACCAATGATGAAAAAAATTGAA CTAAGCTTGTTTCTCATTTCCTCTTCTCAGTTTTAAATTGCAAAACTGTCTTTCTTTATGTTTTG
CDS sequence (LotjaGi2g1v0138700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTTCCGATCTCGAAGCCAAAGCCAAAGAGGCCTTCGTGGAAGACCACTTTGAACTAGCGGTGGAGCTTCTCACTCA GGCCATTGATGTCGACCCCAAGCATGCCGAACTCTATGCAGACCGTGCCCAGGCGAACATCAAACTCATCAACTTCACCG AGGCTATTGCTGATGCAAACAAAGCAATTGAGTTGAATCCTTCTCTATCAAAGGCATATTTGCGCAAAGGTACTGCATGC ATGAAACTTGAGGAATACCAGACTGCTAAGACTGCTCTGGAGATGGGTGCTACATTGTCTACAGACAAATCAAGATTTCT AAATTTGATCAAAGAATGTGATAAACTCATTGCAGAAGAATCTTATCCGATGCCTATACAGGAAAAGGCCACAACACTGG ATGCATCTCCAAAAGATGTTCAGCCGGATAAAGATCTTACAGAGCAGCCAATAGTAGCAGTGGCTAAACCTAAATATAGG CATGAATTCTACCAGAAACCGGATGAAGTGGTTGTAACCATATTTGCAAAGGGCGTATCAAAGGAAAGCATTACTGTTGA TTTTGGTGAACAAATATTAAGTGTTAGCATTAATGTCCCTGGAGAAGATGCATATACTTTTCAGCCTCGCTTATTTGGAA AGATCATATCTTCCAGATGCCGGTATGAAGTTTTGTCCACCAAAATTGAAATTCGCCTAGGGAAAGCAGAACCTATTCAC TGGAATTCACTAGAATTCACCAGAGAGGTTGCAGTTGCACAGAGGGCTAATATTTCTTCTGTTATTGGAAGTCAAAGACC TACTTACCCATCCTCAAAACCAAAAAAAGATTGGGATAAGCTTGAAGCGCAAGTTAAAAAAGAGGAGAAGGACGAAAAAC TTGATGGTGATGCAGCGCTCAACAAATTTTTCCGGGAAATATATCAAGATGCAGATGAGGATACAAGAAGGGCAATGAAA AAGTCATTTGTGGAGTCTAATGGAACAGTACTGTCAACAAACTGGAAAGAAGTGGGAACAAAGAAGGTAGAGGGAAGTCC TCCTGATGGCATGGAATTGAGGAAATGGGAATATTAA
Protein sequence (LotjaGi2g1v0138700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASDLEAKAKEAFVEDHFELAVELLTQAIDVDPKHAELYADRAQANIKLINFTEAIADANKAIELNPSLSKAYLRKGTAC MKLEEYQTAKTALEMGATLSTDKSRFLNLIKECDKLIAEESYPMPIQEKATTLDASPKDVQPDKDLTEQPIVAVAKPKYR HEFYQKPDEVVVTIFAKGVSKESITVDFGEQILSVSINVPGEDAYTFQPRLFGKIISSRCRYEVLSTKIEIRLGKAEPIH WNSLEFTREVAVAQRANISSVIGSQRPTYPSSKPKKDWDKLEAQVKKEEKDEKLDGDAALNKFFREIYQDADEDTRRAMK KSFVESNGTVLSTNWKEVGTKKVEGSPPDGMELRKWEY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 358 | 358 | 7.6E-171 | – | |
| PANTHER | 1 | 358 | 358 | 7.6E-171 | – | |
| Gene3D | 1 | 147 | 147 | 2.1E-29 | ||
| SMART | 2 | 35 | 34 | 20.0 | ||
| ProSiteProfiles | 2 | 35 | 34 | 6.992 | ||
| ProSiteProfiles | 2 | 103 | 102 | 17.412 | ||
| SUPERFAMILY | 3 | 113 | 111 | 3.35E-24 | ||
| SMART | 36 | 69 | 34 | 0.055 | ||
| Pfam | 36 | 68 | 33 | 0.0081 | ||
| ProSiteProfiles | 36 | 69 | 34 | 8.585 | ||
| SMART | 70 | 103 | 34 | 12.0 | ||
| ProSiteProfiles | 70 | 103 | 34 | 5.959 | ||
| SUPERFAMILY | 148 | 252 | 105 | 1.83E-31 | ||
| Gene3D | 153 | 258 | 106 | 6.3E-29 | ||
| ProSiteProfiles | 156 | 245 | 90 | 16.006 | ||
| Pfam | 160 | 235 | 76 | 1.4E-14 | ||
| CDD | 162 | 245 | 84 | 3.70048E-31 | – | |
| ProSiteProfiles | 268 | 358 | 91 | 35.883 | ||
| Pfam | 276 | 356 | 81 | 3.7E-36 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi2g1v0138700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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