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| Field | Value |
|---|---|
| Gene ID | Lj1g3v3329370 |
| Transcript ID | Lj1g3v3329370.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: solute carrier family 35 member F1-like [Glycine max] gi|356569103|ref|XP_003552745.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 34 | 34 | – | – | |
| Phobius | 1 | 13 | 13 | – | – | |
| Pfam | 10 | 299 | 290 | 9.30E-134 | ||
| PANTHER | 11 | 334 | 324 | 5.40E-189 | – | |
| PANTHER | 11 | 334 | 324 | 5.40E-189 | – | |
| TMHMM | 12 | 34 | 23 | – | – | |
| Phobius | 14 | 26 | 13 | – | – | |
| Phobius | 27 | 34 | 8 | – | – | |
| Phobius | 35 | 49 | 15 | – | – | |
| TMHMM | 49 | 66 | 18 | – | – | |
| Phobius | 50 | 66 | 17 | – | – | |
| SUPERFAMILY | 60 | 150 | 91 | 1.57E-10 | – | |
| Phobius | 67 | 74 | 8 | – | – | |
| Phobius | 75 | 92 | 18 | – | – | |
| TMHMM | 75 | 97 | 23 | – | – | |
| Phobius | 93 | 97 | 5 | – | – | |
| Phobius | 98 | 122 | 25 | – | – | |
| TMHMM | 101 | 123 | 23 | – | – | |
| Phobius | 123 | 128 | 6 | – | – | |
| Phobius | 129 | 147 | 19 | – | – | |
| TMHMM | 130 | 152 | 23 | – | – | |
| Phobius | 148 | 193 | 46 | – | – | |
| TMHMM | 167 | 186 | 20 | – | – | |
| TMHMM | 193 | 212 | 20 | – | – | |
| Phobius | 194 | 213 | 20 | – | – | |
| Phobius | 214 | 224 | 11 | – | – | |
| Phobius | 225 | 245 | 21 | – | – | |
| TMHMM | 227 | 249 | 23 | – | – | |
| Phobius | 246 | 256 | 11 | – | – | |
| Phobius | 257 | 275 | 19 | – | – | |
| Phobius | 276 | 281 | 6 | – | – | |
| TMHMM | 282 | 301 | 20 | – | – | |
| Phobius | 282 | 301 | 20 | – | – | |
| Phobius | 302 | 346 | 45 | – | – | |
| MobiDBLite | 303 | 346 | 44 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj1g3v3329370.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v3329370.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.